Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14562
- Subject:
- XM_017012666.2
- Aligned Length:
- 1638
- Identities:
- 839
- Gaps:
- 602
Alignment
Query 1 ATGGCCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGCTGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTTTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGCTCAAG 444
||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||..|||.
Sbjct 1 --------------ATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGCAAA 60
Query 445 GGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTGGGTT 518
||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||||.||
Sbjct 61 GGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGGTTT 134
Query 519 TGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCTGTGGG 592
.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|.||||
Sbjct 135 CGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCTGGG 208
Query 593 CTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTAC 666
|.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...||||||
Sbjct 209 CATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTGTAC 282
Query 667 CAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGGATC 740
|||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||..|.|
Sbjct 283 CAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAACC 355
Query 741 TGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCCCTGGA 812
|.|||||..|||||||||||||.|||||..||||.||||||||||| || ||.|||.|.||||||||.|||.
Sbjct 356 TCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCCGTGGG 427
Query 813 TCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATGC 885
|||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.|||||||||||
Sbjct 428 TCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC 500
Query 886 CAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA------ 953
||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||| |.|.|||.|||
Sbjct 501 CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCT-CAGTGGGCAGACAGACC 573
Query 954 ------------------------------------------------GTGGGGGA------------------ 961
.|||.|||
Sbjct 574 ACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTACT 647
Query 962 -AACAAGAAGAGC-GATGGTGTGAAG--------GAAT------------------------------------ 989
|||||||| ||| |||||.||.||| ||||
Sbjct 648 CAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAA 720
Query 990 ---------------------------CCTCA------------------------------------------ 994
|||||
Sbjct 721 GGGACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGGAGTC 794
Query 995 ----GAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAGTGCGGAAACAGGAAATTATAAAAGTGACAG 1064
||.||..||||.||||||||.||||||||||||.|.||||..|||||.|||||.||.||.||....||.|
Sbjct 795 TTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCGGAAGCAGGAGATCATTAAGACCACGG 868
Query 1065 AGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGCC 1138
|||||||.||.||.|||.|.|.|||.||.||.||||||.|||||.||||.||.||.|||||.||..||||..|.
Sbjct 869 AGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCG 942
Query 1139 TTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCTG-TGGT 1211
||.||.|||||.||.|||||.|||||||||||.||..||||||||||..|||||||.||.||.|||||| |||
Sbjct 943 TTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG- 1015
Query 1212 CCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGC 1285
||..||||||||||||..|.|||||.|||||||||||.||.|||.|.|||.|.||.||.||.||..|.||||||
Sbjct 1016 CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGC 1089
Query 1286 ATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGC--GGCATCCCACGCACCGCCCAGTCGGAGGAGACC 1357
|||||.||||||||..|||||||||||.|.|||| ||| |||...||.||||||..||||||.|||||||||
Sbjct 1090 ATCGCTTACATCCGGCTCACGCAGTACATTGACG--GGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACC 1161
Query 1358 CGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGC-CCTCCGTCCTGC 1430
||.||.|||||||||||.||||||||.|||||||.|||.|||||||||.| ||.|||||| |||..| ||
Sbjct 1162 CGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTG--CTCGGGCGCGCCTGTG----GC 1229
Query 1431 CCCAC----- 1435
|||.|
Sbjct 1230 CCCGCTGCAG 1239
