Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14562
- Subject:
- XM_017012667.2
- Aligned Length:
- 1593
- Identities:
- 836
- Gaps:
- 557
Alignment
Query 1 ATGGCCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGCTGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTTTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGCTCAAG 444
||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||..|||.
Sbjct 1 --------------ATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGCAAA 60
Query 445 GGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTGGGTT 518
||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||||.||
Sbjct 61 GGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGGTTT 134
Query 519 TGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCTGTGGG 592
.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|.||||
Sbjct 135 CGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCTGGG 208
Query 593 CTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTAC 666
|.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...||||||
Sbjct 209 CATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTGTAC 282
Query 667 CAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGGATC 740
|||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||..|.|
Sbjct 283 CAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAACC 355
Query 741 TGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCCCTGGA 812
|.|||||..|||||||||||||.|||||..||||.||||||||||| || ||.|||.|.||||||||.|||.
Sbjct 356 TCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCCGTGGG 427
Query 813 TCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATGC 885
|||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.|||||||||||
Sbjct 428 TCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC 500
Query 886 CAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA------ 953
||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||| |.|.|||.|||
Sbjct 501 CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCT-CAGTGGGCAGACAGACC 573
Query 954 ------------------------------------------------GTGGGGGA------------------ 961
.|||.|||
Sbjct 574 ACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTACT 647
Query 962 -AACAAGAAGAGC-GATGGTGTGAA------------------------------------------------- 984
|||||||| ||| |||||.||.||
Sbjct 648 CAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAA 720
Query 985 -----------------------GGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAGT 1035
|||.||.||.||.||..||||.||||||||.||||||||||||.|.||||.
Sbjct 721 GGGACGCTTCCTCCTGCCGCCCTGGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGC 794
Query 1036 GCGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGTCCTACA 1109
.|||||.|||||.||.||.||....||.||||||||.||.||.|||.|.|.|||.||.||.||||||.|||||.
Sbjct 795 CCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACG 868
Query 1110 CGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGGACTTC 1183
||||.||.||.|||||.||..||||..|.||.||.|||||.||.|||||.|||||||||||.||..||||||||
Sbjct 869 CGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTC 942
Query 1184 CATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCCCCACA 1256
||..|||||||.||.||.|||||| ||| ||..||||||||||||..|.|||||.|||||||||||.||.|||.
Sbjct 943 CACAGATTCTACTTCGAGAACCTGCTGG-CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACG 1015
Query 1257 TCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGC--GGCA 1328
|.|||.|.||.||.||.||..|.|||||||||||.||||||||..|||||||||||.|.|||| ||| |||.
Sbjct 1016 TGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACG--GGCAGGGCC 1087
Query 1329 TCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTCCACTTC 1402
..||.||||||..||||||.|||||||||||.||.|||||||||||.||||||||.|||||||.|||.||||||
Sbjct 1088 GGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTC 1161
Query 1403 CACAGATCTGGGGCGC-CCTCCGTCCTGCCCCAC----- 1435
|||.| ||.|||||| |||..| |||||.|
Sbjct 1162 CACTG--CTCGGGCGCGCCTGTG----GCCCCGCTGCAG 1194
