Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14562
• Subject: XM_017012668.2
• Aligned Length: 1565
• Identities: 835
• Gaps: 528

Alignment

Query    1  ATGGCCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGCTGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTTTGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTGTGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGCTCAAG  444
                          ||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||..|||.
Sbjct    1  --------------ATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGCAAA  60

Query  445  GGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTGGGTT  518
            ||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||||.||
Sbjct   61  GGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGGTTT  134

Query  519  TGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCTGTGGG  592
            .||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|.||||
Sbjct  135  CGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCTGGG  208

Query  593  CTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTAC  666
            |.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...||||||
Sbjct  209  CATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTGTAC  282

Query  667  CAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGGATC  740
            |||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||..|.|
Sbjct  283  CAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAACC  355

Query  741  TGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCCCTGGA  812
            |.|||||..|||||||||||||.|||||..||||.|||||||||||  ||  ||.|||.|.||||||||.|||.
Sbjct  356  TCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCCGTGGG  427

Query  813  TCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATGC  885
            |||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.|||||||||||
Sbjct  428  TCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC  500

Query  886  CAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAGTGGGG  959
            ||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||||.|.||..||||||....
Sbjct  501  CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTAC  574

Query  960  GAAACAAGAAGAGC-GATGGTGTGAAG--------GAAT-----------------------------------  989
            ..|||||||| ||| |||||.||.|||        ||||                                   
Sbjct  575  TCAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAA  647

Query  990  ----------------------------CCTCA-----------------------------------------  994
                                        |||||                                         
Sbjct  648  AGGGACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGGAGT  721

Query  995  -----GAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAGTGCGGAAACAGGAAATTATAAAAGTGACA  1063
                 ||.||..||||.||||||||.||||||||||||.|.||||..|||||.|||||.||.||.||....||.
Sbjct  722  CTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCGGAAGCAGGAGATCATTAAGACCACG  795

Query 1064  GAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGC  1137
            ||||||||.||.||.|||.|.|.|||.||.||.||||||.|||||.||||.||.||.|||||.||..||||..|
Sbjct  796  GAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTC  869

Query 1138  CTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCTG-TGG  1210
            .||.||.|||||.||.|||||.|||||||||||.||..||||||||||..|||||||.||.||.|||||| |||
Sbjct  870  GTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG  943

Query 1211  TCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTG  1284
             ||..||||||||||||..|.|||||.|||||||||||.||.|||.|.|||.|.||.||.||.||..|.|||||
Sbjct  944  -CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTG  1016

Query 1285  CATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGC--GGCATCCCACGCACCGCCCAGTCGGAGGAGAC  1356
            ||||||.||||||||..|||||||||||.|.||||  |||  |||...||.||||||..||||||.||||||||
Sbjct 1017  CATCGCTTACATCCGGCTCACGCAGTACATTGACG--GGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGAC  1088

Query 1357  CCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGC-CCTCCGTCCTG  1429
            |||.||.|||||||||||.||||||||.|||||||.|||.|||||||||.|  ||.|||||| |||..|    |
Sbjct 1089  CCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTG--CTCGGGCGCGCCTGTG----G  1156

Query 1430  CCCCAC-----  1435
            ||||.|     
Sbjct 1157  CCCCGCTGCAG  1167