Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14562
• Subject: XM_017012670.2
• Aligned Length: 1520
• Identities: 832
• Gaps: 483

Alignment

Query    1  ATGGCCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGCTGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTTTGA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTGTGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGCTCAAG  444
                          ||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||..|||.
Sbjct    1  --------------ATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGCAAA  60

Query  445  GGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTGGGTT  518
            ||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||||.||
Sbjct   61  GGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGGTTT  134

Query  519  TGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCTGTGGG  592
            .||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|.||||
Sbjct  135  CGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCTGGG  208

Query  593  CTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTAC  666
            |.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...||||||
Sbjct  209  CATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTGTAC  282

Query  667  CAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGGATC  740
            |||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||..|.|
Sbjct  283  CAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAACC  355

Query  741  TGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCCCTGGA  812
            |.|||||..|||||||||||||.|||||..||||.|||||||||||  ||  ||.|||.|.||||||||.|||.
Sbjct  356  TCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCCGTGGG  427

Query  813  TCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATGC  885
            |||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.|||||||||||
Sbjct  428  TCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC  500

Query  886  CAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAGTGGGG  959
            ||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||||.|.||..||||||....
Sbjct  501  CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTAC  574

Query  960  GAAACAAGAAGAGC-GATGGTGTGAA------------------------------------------------  984
            ..|||||||| ||| |||||.||.||                                                
Sbjct  575  TCAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAA  647

Query  985  ------------------------GGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAG  1034
                                    |||.||.||.||.||..||||.||||||||.||||||||||||.|.||||
Sbjct  648  AGGGACGCTTCCTCCTGCCGCCCTGGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAG  721

Query 1035  TGCGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGTCCTAC  1108
            ..|||||.|||||.||.||.||....||.||||||||.||.||.|||.|.|.|||.||.||.||||||.|||||
Sbjct  722  CCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTAC  795

Query 1109  ACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGGACTT  1182
            .||||.||.||.|||||.||..||||..|.||.||.|||||.||.|||||.|||||||||||.||..|||||||
Sbjct  796  GCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTT  869

Query 1183  CCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCCCCAC  1255
            |||..|||||||.||.||.|||||| ||| ||..||||||||||||..|.|||||.|||||||||||.||.|||
Sbjct  870  CCACAGATTCTACTTCGAGAACCTGCTGG-CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACAC  942

Query 1256  ATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGC--GGC  1327
            .|.|||.|.||.||.||.||..|.|||||||||||.||||||||..|||||||||||.|.||||  |||  |||
Sbjct  943  GTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACG--GGCAGGGC  1014

Query 1328  ATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTCCACTT  1401
            ...||.||||||..||||||.|||||||||||.||.|||||||||||.||||||||.|||||||.|||.|||||
Sbjct 1015  CGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTT  1088

Query 1402  CCACAGATCTGGGGCGC-CCTCCGTCCTGCCCCAC-----  1435
            ||||.|  ||.|||||| |||..|    |||||.|     
Sbjct 1089  CCACTG--CTCGGGCGCGCCTGTG----GCCCCGCTGCAG  1122