Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14562
• Subject: XM_017314237.1
• Aligned Length: 1974
• Identities: 1170
• Gaps: 557

Alignment

Query    1  ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT  70
            ||||||||||   |.|||||||||||.|||||.||.|||||||||||.|.|||||| ||| ||||||||.||.|
Sbjct    1  ATGGCCACCACGGTGACCTGCACCCGTTTCACCGACGAGTACCAGCTATACGAGGATATT-GGCAAGGGGGCTT  73

Query   71  TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA  143
            ||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||.||.||.|||||
Sbjct   74  TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGTACCGGCCATGAGTATGCAGCCAAGATCATTAATACCAAGAA  146

Query  144  GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG  217
            ||||||.||||||||.||.|||||.||||||.|.|||||.||.||||||||||||||||||||..|||||||.|
Sbjct  147  GCTGTCGGCCAGAGATCACCAGAAACTGGAGAGAGAAGCTCGGATCTGCCGCCTGCTGAAGCATTCCAACATTG  220

Query  218  TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG  291
            |.||.||.||||||||||||||.||.|||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct  221  TACGCCTCCATGACAGCATCTCTGAAGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC  294

Query  292  TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC  365
            ||||||||.||||||||..|.|||||.||||||||.||.||||||||||||||.|||||||||||||||||.||
Sbjct  295  TTTGAAGACATCGTGGCAAGAGAGTACTACAGTGAAGCTGATGCCAGTCACTGCATCCAGCAGATCCTGGAAGC  368

Query  366  TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC  439
            |||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||||||||.|||.|.||||||..|||..
Sbjct  369  TGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCTGAGAACCTGCTTCTGGCCAGCAAAT  442

Query  440  TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT  513
            .|||.||.|||||||||||||||||||||||.|||||||||||.|||||..||||.||.|||||||||||||||
Sbjct  443  GCAAAGGCGCCGCAGTGAAGCTGGCAGACTTCGGCCTGGCCATCGAGGTTCAGGGAGACCAGCAGGCATGGTTT  516

Query  514  GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT  587
            ||.|||||.||.||.||.||.||.||.||.||.||.||.||.||||||||..|.|||||.||.|||||||||.|
Sbjct  517  GGATTTGCGGGAACGCCAGGCTACCTGTCTCCCGAGGTCCTTCGGAAGGAGGCCTACGGCAAACCTGTGGACAT  590

Query  588  GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC  661
            .|||||.||||||||.||||||||.|||||||||||.||.|||||.||.|||||||||||||||||.|||...|
Sbjct  591  CTGGGCATGTGGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACAAGC  664

Query  662  TGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAA  735
            ||||||||||||||||.||.|| |.|.||||||||||||||.||.||.||||||||.||.||.||.||||||||
Sbjct  665  TGTACCAGCAGATCAAGGCTGG-GGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCCAA  737

Query  736  GGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCC  807
            ..|.||.|||||..|||||||||||||.|||||..||||.||||||||.||  ||  ||.|||.|.||||||||
Sbjct  738  AAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGC--CCATGAGGCCCTGAAGCACCC  809

Query  808  CTGGATCTCGCACCGCTCCACCGTGGCATC-GTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC  880
            .|||.|||..||.||.|||||||||||.|| .|| |||||||||||||||||.|||||.||.||||||||||||
Sbjct  810  ATGGGTCTGCCAACGTTCCACCGTGGCCTCTATG-ATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTC  882

Query  881  AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA-  953
            |||||.||||||||.||.|||||||||||.||||||||.|||||||||||..||||.|||| |.|.|||.||| 
Sbjct  883  AATGCAAGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCT-CAGTGGGCAGAC  955

Query  954  -----------------------------------------------------GTGGGGGA-------------  961
                                                                 .|||.|||             
Sbjct  956  AGACCACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCAGCCAAG  1029

Query  962  ---------AACAAGAAGAGC-GATGGTGTGAA-----------------------------------------  984
                     |||||||| ||| |||||.||.||                                         
Sbjct 1030  AGTTTACTCAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCA  1102

Query  985  -------------------------------GGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGAC  1027
                                           ||||||.||.||.|||||||||||.|||||.|||||||||||.
Sbjct 1103  GCCCCAAAGGATCTCTCCCTCCTGCTGCCCTGGAATCTTCCGACAGCACCAACACAACCATAGAGGATGAAGAT  1176

Query 1028  ACCAAAG-------------TG----------------------------------------------------  1036
            .||||||             ||                                                    
Sbjct 1177  GCCAAAGCCCCCAGGGTCCCTGATGTCCTGAGCTTGGTGAGGAGGGCCTCAGGAGCCCCCGAAGCCGAGGGCCC  1250

Query 1037  --------------------------------------------------------------------------  1036
                                                                                      
Sbjct 1251  CCTCTCCTGCCAATCTCCAGTTCCCATTAGCCCCCTTCCAACCCCGTCCCCCAGGATCTCTGACATCCTGAACT  1324

Query 1037  --------------------------------------------------------------------------  1036
                                                                                      
Sbjct 1325  CAGTGAGAAGGGGCTGTGGAACCCCAGAAGCCGAGGGACCCCTATCAGTGGGGCCCCCACCCTGCTTGTCTCCG  1398

Query 1037  --------------------------------------------------------------------------  1036
                                                                                      
Sbjct 1399  GGTCTCCTAGGCCCCCTGCCCACCCCGTCCCCCAGGATCTCTGACATCCTCAACTCAGTGAGGCGGGGCTCAGG  1472

Query 1037  --------------------------------------------------------------------------  1036
                                                                                      
Sbjct 1473  GACCCCAGAAGCTGAGGGCCTCCCACCAGTGGGCCCCCCACCCTGCCCATCTCCGACTCTCCCTGGCCCCTTGC  1546

Query 1037  -----------CGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTT  1099
                       |||||.||||||||.||.||....|||||||||||.|||||.|||.|.|.||||||.||.|||
Sbjct 1547  CCACCCCATCCCGGAAGCAGGAAATCATCAAGACCACAGAGCAGCTCATTGAGGCCGTCAACAATGGGGACTTT  1620

Query 1100  GAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGG  1173
            |||.||||..||||.||.||.|||||.|||.||||..|.||.||.|||||.||.|||||.||||||||.||.||
Sbjct 1621  GAGGCCTATGCGAAAATCTGTGACCCAGGCCTGACCTCATTTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGG  1694

Query 1174  CCTGGACTTCCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTG  1246
            ..||||.|||||..|||||||.|||||.|||||| ||| ||..||||||||||||..|.|||||||||||||||
Sbjct 1695  GATGGATTTCCACAGATTCTACTTTGAGAACCTGCTGG-CCAAGAACAGCAAGCCGATCCACACCACCATCCTG  1767

Query 1247  AATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGC  1320
            ||.||.|||.|.|||.|.||.|||||.||..|.||.||||||||||||||||||.||||.||||||.|   ||.
Sbjct 1768  AACCCGCACGTGCACGTCATTGGCGAGGATGCGGCATGCATCGCCTACATCCGCCTCACACAGTACAT---CGA  1838

Query 1321  TGGC---GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGA  1391
            ||||   ||||..||.||.|||..||||||.||.|||||||||||.|||||||||||.||||||||.|||||||
Sbjct 1839  TGGCCAGGGCAGACCCCGTACCAGCCAGTCCGAAGAGACCCGTGTGTGGCACCGCCGCGACGGCAAGTGGCAGA  1912

Query 1392  TCGTCCACTTCCACAGATCTGGGGCGCCCTCC-GTCCTGCCCCAC-----  1435
            ..||.||.||||||.|  ||.|||||  |||| ||  .|||||.|     
Sbjct 1913  ATGTACATTTCCACTG--CTCGGGCG--CTCCAGT--GGCCCCGCTGCAG  1956