Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14563
- Subject:
- XM_006518490.3
- Aligned Length:
- 1722
- Identities:
- 1218
- Gaps:
- 234
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
|||||||||||.|..|||||||||||||||||||||||.||||||||.|.||||||..|.||||||||.||.||
Sbjct 1 ATGGCCACCACCGCCACCTGCACCCGCTTCACCGACGACTACCAGCTTTTCGAGGAGCTCGGCAAGGGTGCCTT 74
Query 75 CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA 143
|||.||||||||..|.|||||.||| .|||.| .||.||.|||||.||.||.||||||||.|||||
Sbjct 75 CTCAGTGGTCCGGAGGTGTGTAAAGAAAACATCTAC-----GCAGGAATATGCTGCAAAAATCATCAATACCAA 143
Query 144 GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA 217
||||.||||.|||.|||||||.|||||.||.||..|||||||.|||||.|||||.||||||||.|||.|.||||
Sbjct 144 GAAGTTGTCCGCCCGAGATCATCAGAAACTAGAACGAGAGGCCCGGATATGCCGACTTCTGAAACATCCAAACA 217
Query 218 TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG 291
|.|||||||||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct 218 TTGTGCGTCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGAGGGGAG 291
Query 292 CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA 365
.|.|||||||||||||||||.||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||
Sbjct 292 TTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCTGATGCCAGCCACTGTATACATCAGATCCTGGA 365
Query 366 GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC 438
|...|||..|||....||||| .|| |...||||||||.|.||.||.|||||.||||||.||||.|||||.||.
Sbjct 366 GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACCGGGATCTGAAGCCTGAGAACTTGCTGCTGGCGAGT 438
Query 439 AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG 512
||.|||||.||.|||||.||.|||||.||.||.||.|||||.||.|||||.||.|||||.||.||||||||.||
Sbjct 439 AAATGCAAGGGTGCTGCGGTCAAGCTAGCTGATTTTGGCCTGGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG 512
Query 513 GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG 586
|||||||||.||.|||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct 513 GTTTGGTTTTGCCGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG 586
Query 587 ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC 660
||||||||||.||.|||||.||||||||.|||||.||.|||||||||||.|||||||||||.|||||.||||||
Sbjct 587 ACATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTACCCTCCCTTCTGGGATGAGGATCAGCAC 660
Query 661 AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC 734
||||||||.|||||||||||.|||||.|||||.||.|||||.||.||.||.||||||||.||||||||||||||
Sbjct 661 AAGCTGTATCAGCAGATCAAAGCTGGAGCCTACGATTTCCCATCACCAGAATGGGACACAGTCACTCCTGAAGC 734
Query 735 CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC 808
.||.|||.|.||||||||||||||||||||.||||||||.|||||||||||.|||.|..||||.||.|||||||
Sbjct 735 TAAGAACTTGATCAACCAGATGCTGACCATAAACCCTGCAAAGCGCATCACGGCCGACCAGGCTCTCAAGCACC 808
Query 809 CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCT---GAAAAAG 879
|.||||||||.|||||.||.|||||.||||||||||||||..|.||.|||||.||.||||| || |.|||
Sbjct 809 CATGGGTCTGTCAACGGTCTACGGTGGCATCCATGATGCATCGCCAAGAGACGGTAGAGTG-CTTACGCAAA-- 879
Query 880 TTCAATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAA 953
|||||.|||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||.|||||.|||||
Sbjct 880 TTCAACGCCCGGAGAAAACTGAAGGGTGCCATCCTCACAACCATGCTTGTCTCCAGGAACTTTTCAGCTGCCAA 953
Query 954 GAGTTTACTCAACAAGAAAGCAGATGG-----------------AGTCAAGCCCCAGACG-------AAT---- 999
.||..||.|.||||||||..||||||| ||||.||..|||| || |||
Sbjct 954 AAGCCTATTGAACAAGAAGTCAGATGGCGGTGTCAAGAAAAGGAAGTCGAGTTCCAG-CGTGCACCTAATGCCA 1026
Query 1000 ------AGCACCAAAAACAGTGC-----AGCCGCCACCAGCCCCAAAGGGAC-GCTTCCTCCTG----CCGCCC 1057
|.||.|||||||||| | ||| ||||||| |||.|.| ||..||| || |.|||.
Sbjct 1027 CAGAGCAACAACAAAAACAGT-CTCGTAAGC-----CCAGCCC--AAGAGCCTGCGCCCT--TGCAGACGGCCA 1090
Query 1058 TGGA-------------GT-----------CTTCTG-----------------ACAG-----TGCCAATACCAC 1085
|||| || ||.|.| |||| || .||.|||||
Sbjct 1091 TGGAACCACAAACCACCGTGGTACATAATGCTACAGATGGGATCAAGGGCTCCACAGAGAGCTG-TAACACCAC 1163
Query 1086 CATAGAGGATGAAGA-------------------CG-----------------------CTAAAG--------- 1108
.|.|||.||.||||| || ||.|||
Sbjct 1164 TACAGAAGACGAAGATCTCAAAGCTGCCCCACTCCGCACTGGGAATGGCAGCTTGGTGCCTGAAGGACGGAGCC 1237
Query 1109 CCCGG---------------------------------------------------------------AAGCAG 1119
||||| ||.||.
Sbjct 1238 CCCGGGACAGAACAGCCCCCTCTGCAGGCATGCAGCCCCAGCCTTCTCTCTGCTCCTCAGCCATGAGAAAACAA 1311
Query 1120 GAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTG 1193
||.||||||||||.|||.||.||.||.|||||.|||.|||||||.||.|||||||||||||||.||||.||.||
Sbjct 1312 GAAATCATTAAGATCACAGAACAACTGATCGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTG 1385
Query 1194 TGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCT 1267
||||||.||.||.||.||.||||||||.|||||.||.||.|||||.||.|||||.|||||.|||||.|..||.|
Sbjct 1386 TGACCCGGGCCTCACATCCTTTGAGCCAGAAGCCCTTGGTAACCTCGTGGAAGGAATGGATTTCCATAAGTTTT 1459
Query 1268 ACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATT 1341
||||.|||||.||.|||.||||||||||||||||.||||||||.||||||||.|||||.|||||.|||||.|||
Sbjct 1460 ACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCTATCCACACCACCATCCTAAACCCTCACGTCCACGTGATT 1533
Query 1342 GGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAG 1415
||.|||||.||.||.||||||||.||.|||||||||||.||||||||.|||||||||||.|||||.||||||||
Sbjct 1534 GGGGAGGACGCAGCTTGCATCGCCTATATCCGGCTCACTCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAG 1607
Query 1416 CCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCG 1489
.|||||.|||||||||||.||||||||||||||.||.||||||||||..||.||.||||..||||||||.||.|
Sbjct 1608 TCAGTCAGAGGAGACCCGGGTGTGGCACCGCCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGG 1681
Query 1490 CGCCTGTGGCCCCGCTGCAG 1509
|.||||..||.|||||.|||
Sbjct 1682 CCCCTGCCGCACCGCTACAG 1701
