Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14563
- Subject:
- XM_017314238.1
- Aligned Length:
- 1926
- Identities:
- 1388
- Gaps:
- 420
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
||||||||||||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1 ATGGCCACCACGGTGACCTGCACCCGTTTCACCGACGAGTACCAGCTATACGAGGATATTGGCAAGGGGGCTTT 74
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||||||
Sbjct 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGTACCGGCCATGAGTATGCAGCCAAGATCATTAATACCAAGAAGC 148
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||||||||.||.
Sbjct 149 TGTCGGCCAGAGATCACCAGAAACTGGAGAGAGAAGCTCGGATCTGCCGCCTGCTGAAGCATTCCAACATTGTA 222
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
||.|||||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CGCCTCCATGACAGCATCTCTGAAGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
Query 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG 370
|||||||||.|||||.||||||||||||||.||.|||||||||||||||||.|||||||||||||||||.||.|
Sbjct 297 TGAAGACATCGTGGCAAGAGAGTACTACAGTGAAGCTGATGCCAGTCACTGCATCCAGCAGATCCTGGAAGCTG 370
Query 371 TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGC 444
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||
Sbjct 371 TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCTGAGAACCTGCTTCTGGCCAGCAAATGC 444
Query 445 AAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGG 518
|||||.||.||||||||||||||||||||||||||.||.||||||||.|||||.||||||||||||||||||||
Sbjct 445 AAAGGCGCCGCAGTGAAGCTGGCAGACTTCGGCCTGGCCATCGAGGTTCAGGGAGACCAGCAGGCATGGTTTGG 518
Query 519 TTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCT 592
.||.||.||.||.||||||||||||||.||.|||||||||||.||.|||||.||.|||||.|||||||||||||
Sbjct 519 ATTTGCGGGAACGCCAGGCTACCTGTCTCCCGAGGTCCTTCGGAAGGAGGCCTACGGCAAACCTGTGGACATCT 592
Query 593 GGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTG 666
||||||||||||||||||||||.||||||||.||||||||||||||.||||||||.||||||||.|||||||||
Sbjct 593 GGGCATGTGGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACAAGCTG 666
Query 667 TACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAA 740
||||||||||||||||||||.||.|||||.|||||.||||||||||||||||||||.|||||||||||||||||
Sbjct 667 TACCAGCAGATCAAGGCTGGGGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCCAAAAA 740
Query 741 CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGGG 814
|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||||
Sbjct 741 CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGCCCATGAGGCCCTGAAGCACCCATGGG 814
Query 815 TCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGCC 888
||||||||||.|||||.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||||||.
Sbjct 815 TCTGCCAACGTTCCACCGTGGCCTCTATGATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTCAATGCA 888
Query 889 AGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTACT 962
|||||.||||||||||||||||||||||||||.|||||||||||||||||||||| ||||||||||||||||
Sbjct 889 AGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCT---CAGCCAAGAGTTTACT 959
Query 963 CAACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAAG 1036
|||||||||||||||||||||||||||||||||.||.||||||||||||||..|.|||..||||||||||||||
Sbjct 960 CAACAAGAAAGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCAGCCCCAAAG 1033
Query 1037 GGACGCTTCCTCCTGCCGCCCTGGAG---------------------------------------------TCT 1065
|..|.||.||||||||.||||||||| |||
Sbjct 1034 GATCTCTCCCTCCTGCTGCCCTGGAGCCTCAAACCACCGTTATCCATAACCCAGTGGACGGGATTAAGGAATCT 1107
Query 1066 TCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAG------------------------------- 1108
||.|||||..||||.||.|||||||||||||||||.||.||||
Sbjct 1108 TCCGACAGCACCAACACAACCATAGAGGATGAAGATGCCAAAGCCCCCAGGGTCCCTGATGTCCTGAGCTTGGT 1181
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 1182 GAGGAGGGCCTCAGGAGCCCCCGAAGCCGAGGGCCCCCTCTCCTGCCAATCTCCAGTTCCCATTAGCCCCCTTC 1255
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 1256 CAACCCCGTCCCCCAGGATCTCTGACATCCTGAACTCAGTGAGAAGGGGCTGTGGAACCCCAGAAGCCGAGGGA 1329
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 1330 CCCCTATCAGTGGGGCCCCCACCCTGCTTGTCTCCGGGTCTCCTAGGCCCCCTGCCCACCCCGTCCCCCAGGAT 1403
Query 1109 -------------------------------------------------------------------------- 1108
Sbjct 1404 CTCTGACATCCTCAACTCAGTGAGGCGGGGCTCAGGGACCCCAGAAGCTGAGGGCCTCCCACCAGTGGGCCCCC 1477
Query 1109 ---------------------------------------------CCCGGAAGCAGGAGATCATTAAGACCACG 1137
|||||||||||||.|||||.||||||||.
Sbjct 1478 CACCCTGCCCATCTCCGACTCTCCCTGGCCCCTTGCCCACCCCATCCCGGAAGCAGGAAATCATCAAGACCACA 1551
Query 1138 GAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTC 1211
|||||||||||.||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||
Sbjct 1552 GAGCAGCTCATTGAGGCCGTCAACAATGGGGACTTTGAGGCCTATGCGAAAATCTGTGACCCAGGCCTGACCTC 1625
Query 1212 GTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG 1285
.||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||||
Sbjct 1626 ATTTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGGGATGGATTTCCACAGATTCTACTTTGAGAACCTGCTGG 1699
Query 1286 CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGC 1359
|||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||||||||.||.|||
Sbjct 1700 CCAAGAACAGCAAGCCGATCCACACCACCATCCTGAACCCGCACGTGCACGTCATTGGCGAGGATGCGGCATGC 1773
Query 1360 ATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCG 1433
|||||.||||||||.|||||.||||||||.||.||.||||||.|.|||||.|||||||||||.||.||||||||
Sbjct 1774 ATCGCCTACATCCGCCTCACACAGTACATCGATGGCCAGGGCAGACCCCGTACCAGCCAGTCCGAAGAGACCCG 1847
Query 1434 CGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGC 1507
.||||||||||||||||||||||||||||||||.||.||.|||||||||||||||||.||.|||||||||||||
Sbjct 1848 TGTGTGGCACCGCCGCGACGGCAAGTGGCAGAATGTACATTTCCACTGCTCGGGCGCTCCAGTGGCCCCGCTGC 1921
Query 1508 AG 1509
||
Sbjct 1922 AG 1923