Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14563
- Subject:
- XM_024448218.1
- Aligned Length:
- 1604
- Identities:
- 1193
- Gaps:
- 142
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
|||||||||||.|..|||||||||||.|||||||||||.||||||||||.||||||..||||||||
Sbjct 1 ATGGCCACCACCGCCACCTGCACCCGTTTCACCGACGACTACCAGCTCTTCGAGGAGCTTGGCAAG-------- 66
Query 75 CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA 143
|||||.||| ||| ||| .||.|||||.|||||.||.||||||||.|||||
Sbjct 67 ----------------TGTGTGAAGAAAACCTC--CAC---GCAGGAGTACGCAGCAAAAATCATCAATACCAA 119
Query 144 GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA 217
||||.||||.|||.|.|||||||||||.||.||..|.|||||||||||.||.||.||||||||.|||.|.||||
Sbjct 120 GAAGTTGTCTGCCCGGGATCACCAGAAACTAGAACGTGAGGCTCGGATATGTCGACTTCTGAAACATCCAAACA 193
Query 218 TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG 291
|||||||.|||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct 194 TCGTGCGCCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGCGGGGAG 267
Query 292 CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA 365
||.|||||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.|||||
Sbjct 268 CTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGA 341
Query 366 GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC 438
|...|||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.
Sbjct 342 GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGT 414
Query 439 AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG 512
||.|||||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.||
Sbjct 415 AAATGCAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG 488
Query 513 GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG 586
|||||||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct 489 GTTTGGTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG 562
Query 587 ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC 660
|.||||||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.||||||
Sbjct 563 ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCAC 636
Query 661 AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC 734
||||||||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.|||||||||||
Sbjct 637 AAGCTGTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGC 710
Query 735 CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC 808
|||.|||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.|||||||
Sbjct 711 CAAGAACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACC 784
Query 809 CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC 882
||||||||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...||||||
Sbjct 785 CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTC 858
Query 883 AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC------------ 944
||||||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.|||||
Sbjct 859 AATGCCCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAGTTGGCAGGCA 932
Query 945 ---------------------------------------------------AGCAGCCAAGAGTTTACTCAACA 967
|||.|||||.||..||.|.||||
Sbjct 933 GAGCTCCGCCCCCGCCTCGCCTGCCGCGAGCGCCGCCGGCCTGGCCGGGCAAGCTGCCAAAAGCCTATTGAACA 1006
Query 968 AGAAAGCAGATGG-----------------AGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCA 1024
||||..|.||||| ||||.||..|||| || .|||||.|| ||.| ||||
Sbjct 1007 AGAAGTCGGATGGCGGTGTCAAGAAAAGGAAGTCGAGTTCCAG-CG---TGCACCTAA-----TGGA---GCCA 1068
Query 1025 CCAGCCCCAAAGGGACGCTTC-CTCCTGCCGCCCTGGA-----GTCTTCTGACAGTGC--CAATACCACCATAG 1090
|.|.||.|...||.||.|..| ||.|.|..| ||| |.||.|..|.||.|| |||.|||||||.||
Sbjct 1069 CAAACCACTGTGGTACACAACGCTACAGATG----GGATCAAGGGCTCCACAGAGAGCTGCAACACCACCACAG 1138
Query 1091 AGGATGAAGACGCT-AAAGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAA 1163
|.|||||.||| || ||||..||.||.||||||||||||||||..||.||.|||||.||.||.|||.|||||||
Sbjct 1139 AAGATGAGGAC-CTCAAAGTGCGAAAACAGGAGATCATTAAGATTACAGAACAGCTGATTGAAGCCATCAACAA 1211
Query 1164 CGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACC 1237
.||.|||||||||||||||.||||.||.|||||.|||||.||.||.||.|||||||||||.||.||.||.||||
Sbjct 1212 TGGGGACTTTGAGGCCTACACGAAGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTGAGGCCCTTGGTAACC 1285
Query 1238 TGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACACG 1311
|.||.||.||||||||.|||||.|..||.|||||.|||||.||.|||.||||||||||||||||.|||||.||.
Sbjct 1286 TCGTGGAGGGGATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCTATCCATACC 1359
Query 1312 ACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTA 1385
||||||||.|||||||||||.|||||.|||||.|||||.||.||.||||||||.||||||||.|||||.|||||
Sbjct 1360 ACCATCCTAAACCCACACGTCCACGTGATTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCCTCACCCAGTA 1433
Query 1386 CATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGT 1459
|||.|||||||||||.|||||.||||||||||||||.||.||||||||.||.||||||||.||.||.|||||||
Sbjct 1434 CATCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCGGGTCTGGCACCGTCGGGATGGCAAGT 1507
Query 1460 GGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG 1509
|||..||.||.||||..||||||||.||.||.||||..||.|||||||||
Sbjct 1508 GGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTGCAG 1557