Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14564
• Subject: XM_006514465.2
• Aligned Length: 1998
• Identities: 1390
• Gaps: 489

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            ||||||||||||||||||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct    1  ATGGCCACCACGGTGACCTGCACCCGTTTCACCGACGAGTACCAGCTATACGAGGATATTGGCAAGGGGGCTTT  74

Query   75  CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC  148
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||||||||||
Sbjct   75  CTCTGTGGTCCGACGCTGTGTCAAGCTCTGTACCGGCCATGAGTATGCAGCCAAGATCATTAATACCAAGAAGC  148

Query  149  TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG  222
            ||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||||||||.||.
Sbjct  149  TGTCGGCCAGAGATCACCAGAAACTGGAGAGAGAAGCTCGGATCTGCCGCCTGCTGAAGCATTCCAACATTGTA  222

Query  223  CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT  296
            ||.|||||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGCCTCCATGACAGCATCTCTGAAGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT  296

Query  297  TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG  370
            |||||||||.|||||.||||||||||||||.||.|||||||||||||||||.|||||||||||||||||.||.|
Sbjct  297  TGAAGACATCGTGGCAAGAGAGTACTACAGTGAAGCTGATGCCAGTCACTGCATCCAGCAGATCCTGGAAGCTG  370

Query  371  TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGC  444
            ||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||
Sbjct  371  TTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCTGAGAACCTGCTTCTGGCCAGCAAATGC  444

Query  445  AAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGG  518
            |||||.||.||||||||||||||||||||||||||.||.||||||||.|||||.||||||||||||||||||||
Sbjct  445  AAAGGCGCCGCAGTGAAGCTGGCAGACTTCGGCCTGGCCATCGAGGTTCAGGGAGACCAGCAGGCATGGTTTGG  518

Query  519  TTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCT  592
            .||.||.||.||.||||||||||||||.||.|||||||||||.||.|||||.||.|||||.|||||||||||||
Sbjct  519  ATTTGCGGGAACGCCAGGCTACCTGTCTCCCGAGGTCCTTCGGAAGGAGGCCTACGGCAAACCTGTGGACATCT  592

Query  593  GGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTG  666
            ||||||||||||||||||||||.||||||||.||||||||||||||.||||||||.||||||||.|||||||||
Sbjct  593  GGGCATGTGGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACAAGCTG  666

Query  667  TACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAA  740
            ||||||||||||||||||||.||.|||||.|||||.||||||||||||||||||||.|||||||||||||||||
Sbjct  667  TACCAGCAGATCAAGGCTGGGGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCCAAAAA  740

Query  741  CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGGG  814
            |||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||||
Sbjct  741  CCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGCCCATGAGGCCCTGAAGCACCCATGGG  814

Query  815  TCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGCC  888
            ||||||||||.|||||.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||||||.
Sbjct  815  TCTGCCAACGTTCCACCGTGGCCTCTATGATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTCAATGCA  888

Query  889  AGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAG----------------  946
            |||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||                
Sbjct  889  AGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCTCAGTGGGCAGACAGACCAC  962

Query  947  --------------------------------------------------------CAGCCAAGAGTTTACTCA  964
                                                                    .|||||||||||||||||
Sbjct  963  CGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTACTCA  1036

Query  965  ACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAAGGG  1038
            |||||||||||||||||||||||||||||||.||.||||||||||||||..|.|||..|||||||||||||||.
Sbjct 1037  ACAAGAAAGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCAGCCCCAAAGGA  1110

Query 1039  ACGCTTCCTCCTGCCGCCCTGGAG---------------------------------------------TCTTC  1067
            .|.||.||||||||.|||||||||                                             |||||
Sbjct 1111  TCTCTCCCTCCTGCTGCCCTGGAGCCTCAAACCACCGTTATCCATAACCCAGTGGACGGGATTAAGGAATCTTC  1184

Query 1068  TGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAG---------------------------------  1108
            .|||||..||||.||.|||||||||||||||||.||.||||                                 
Sbjct 1185  CGACAGCACCAACACAACCATAGAGGATGAAGATGCCAAAGCCCCCAGGGTCCCTGATGTCCTGAGCTTGGTGA  1258

Query 1109  --------------------------------------------------------------------------  1108
                                                                                      
Sbjct 1259  GGAGGGCCTCAGGAGCCCCCGAAGCCGAGGGCCCCCTCTCCTGCCAATCTCCAGTTCCCATTAGCCCCCTTCCA  1332

Query 1109  --------------------------------------------------------------------------  1108
                                                                                      
Sbjct 1333  ACCCCGTCCCCCAGGATCTCTGACATCCTGAACTCAGTGAGAAGGGGCTGTGGAACCCCAGAAGCCGAGGGACC  1406

Query 1109  --------------------------------------------------------------------------  1108
                                                                                      
Sbjct 1407  CCTATCAGTGGGGCCCCCACCCTGCTTGTCTCCGGGTCTCCTAGGCCCCCTGCCCACCCCGTCCCCCAGGATCT  1480

Query 1109  --------------------------------------------------------------------------  1108
                                                                                      
Sbjct 1481  CTGACATCCTCAACTCAGTGAGGCGGGGCTCAGGGACCCCAGAAGCTGAGGGCCTCCCACCAGTGGGCCCCCCA  1554

Query 1109  -------------------------------------------CCCGGAAGCAGGAGATCATTAAGACCACGGA  1139
                                                       |||||||||||||.|||||.||||||||.||
Sbjct 1555  CCCTGCCCATCTCCGACTCTCCCTGGCCCCTTGCCCACCCCATCCCGGAAGCAGGAAATCATCAAGACCACAGA  1628

Query 1140  GCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGT  1213
            |||||||||.||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||.|
Sbjct 1629  GCAGCTCATTGAGGCCGTCAACAATGGGGACTTTGAGGCCTATGCGAAAATCTGTGACCCAGGCCTGACCTCAT  1702

Query 1214  TTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCC  1287
            |||||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||||||
Sbjct 1703  TTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGGGATGGATTTCCACAGATTCTACTTTGAGAACCTGCTGGCC  1776

Query 1288  AAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCAT  1361
            |||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||||||||.||.|||||
Sbjct 1777  AAGAACAGCAAGCCGATCCACACCACCATCCTGAACCCGCACGTGCACGTCATTGGCGAGGATGCGGCATGCAT  1850

Query 1362  CGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCG  1435
            |||.||||||||.|||||.||||||||.||.||.||||||.|.|||||.|||||||||||.||.||||||||.|
Sbjct 1851  CGCCTACATCCGCCTCACACAGTACATCGATGGCCAGGGCAGACCCCGTACCAGCCAGTCCGAAGAGACCCGTG  1924

Query 1436  TGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG  1509
            |||||||||||||||||||||||||||||||.||.||.|||||||||||||||||.||.|||||||||||||||
Sbjct 1925  TGTGGCACCGCCGCGACGGCAAGTGGCAGAATGTACATTTCCACTGCTCGGGCGCTCCAGTGGCCCCGCTGCAG  1998