Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14564
• Subject: XM_024448219.1
• Aligned Length: 1570
• Identities: 1027
• Gaps: 323

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG  222
                                                       .||.||.||||||||.|||.|.|||||||| 
Sbjct    1  -------------------------------------------ATGTCGACTTCTGAAACATCCAAACATCGT-  30

Query  223  CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT  296
                                                                  ||.||.||.||||||||.||
Sbjct   31  ------------------------------------------------------GTTACCGGCGGGGAGCTGTT  50

Query  297  TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG  370
            |||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.||||||...|
Sbjct   51  TGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGAGAGTG  124

Query  371  TTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTG  443
            ||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.||.||
Sbjct  125  TTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGTAAATG  197

Query  444  CAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTG  517
            |||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.|||||||
Sbjct  198  CAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTG  271

Query  518  GTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATC  591
            ||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.||||||||.|||
Sbjct  272  GTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGGATATC  345

Query  592  TGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCT  665
            |||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.|||||||||||
Sbjct  346  TGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCACAAGCT  419

Query  666  GTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAA  739
            |||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.||||||||||||||.|
Sbjct  420  GTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGCCAAGA  493

Query  740  ACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGG  813
            ||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.||||||||||||
Sbjct  494  ACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCCGTGG  567

Query  814  GTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC  887
            |||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...|||||||||||
Sbjct  568  GTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTCAATGC  641

Query  888  CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAGTTTAC  961
            |.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||||||||.|||||.||..||.
Sbjct  642  CCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAGCTGCCAAAAGCCTAT  715

Query  962  TCAACAAGAAAGCAGAT---GGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGC-----AGCCGCCACCA  1027
            |.||||||||..|.|||   ||.||||||||.||||..||   ||.|||||||||| |     |||     |||
Sbjct  716  TGAACAAGAAGTCGGATGGCGGTGTCAAGCCACAGAGCAA---CAACAAAAACAGT-CTCGTAAGC-----CCA  780

Query 1028  GCCCCAAAG-GGACGCTTCCTCCTG----CCGCCCTGGAG----------------------------------  1062
            ||||  ||| |..|||..|||  ||    |.|||.|||||                                  
Sbjct  781  GCCC--AAGAGCCCGCGCCCT--TGCAGACGGCCATGGAGCCACAAACCACTGTGGTACACAACGCTACAGATG  850

Query 1063  -----------TCTTCTGACAG-TGCCAATACCACCATAGAGGATGAAGACGCT-AAAGCCCGGAAGCAGGAGA  1123
                       ||..|.||.|| || |||.|||||||.|||.|||||.||| || ||||..||.||.|||||||
Sbjct  851  GGATCAAGGGCTCCACAGAGAGCTG-CAACACCACCACAGAAGATGAGGAC-CTCAAAGTGCGAAAACAGGAGA  922

Query 1124  TCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGAC  1197
            |||||||||..||.||.|||||.||.||.|||.|||||||.||.|||||||||||||||.||||.||.|||||.
Sbjct  923  TCATTAAGATTACAGAACAGCTGATTGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGAT  996

Query 1198  CCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTT  1271
            |||||.||.||.||.|||||||||||.||.||.||.|||||.||.||.||||||||.|||||.|..||.|||||
Sbjct  997  CCAGGCCTCACTTCCTTTGAGCCTGAGGCCCTTGGTAACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTT  1070

Query 1272  CGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAG  1345
            .|||||.||.|||.||||||||||||||||.|||||.||.||||||||.|||||||||||.|||||.|||||.|
Sbjct 1071  TGAGAATCTCCTGTCCAAGAACAGCAAGCCTATCCATACCACCATCCTAAACCCACACGTCCACGTGATTGGGG  1144

Query 1346  AGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAG  1419
            ||||.||.||.||||||||.||||||||.|||||.||||||||.|||||||||||.|||||.||||||||||||
Sbjct 1145  AGGACGCAGCGTGCATCGCCTACATCCGCCTCACCCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAG  1218

Query 1420  TCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCC  1493
            ||.||.||||||||.||.||||||||.||.||.||||||||||..||.||.||||..||||||||.||.||.||
Sbjct 1219  TCAGAAGAGACCCGGGTCTGGCACCGTCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCC  1292

Query 1494  TGTGGCCCCGCTGCAG  1509
            ||..||.|||||||||
Sbjct 1293  TGCCGCACCGCTGCAG  1308