Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14615
Subject:
XM_017316866.1
Aligned Length:
2702
Identities:
2352
Gaps:
86

Alignment

Query    1  ATGCCGGTCCGGAAGCAAGATACCCAGAGAGCATTGCACCTTTTGGAGGAATATCGTTCAAAACTAAGCCAAAC  74
            ||||||||||||||||||||||||||||||||||||||.||.|||||.||||||||.||.||||||||||||||
Sbjct    1  ATGCCGGTCCGGAAGCAAGATACCCAGAGAGCATTGCATCTGTTGGAAGAATATCGATCGAAACTAAGCCAAAC  74

Query   75  TGAAGACAGACAGCTCAGAAGTTCCATAGAACGGGTTATTAACATATTTCAGAGCAACCTCTTTCAGGCTTTAA  148
            ||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGAAGACAGACAACTCAGAAGTTCCATAGAGCGGGTTATTAACATATTTCAGAGCAACCTCTTTCAGGCTTTAA  148

Query  149  TAGATATTCAAGAATTTTATGAAGTGACCTTACTGGATAATCCAAAATGTATAGATCGTTCAAAGCCGTCTGAA  222
            ||||||||||||||||||||||||||||||||||.|||||||||||||||.|.||||.||||||||.||.||||
Sbjct  149  TAGATATTCAAGAATTTTATGAAGTGACCTTACTTGATAATCCAAAATGTGTGGATCATTCAAAGCAGTGTGAA  222

Query  223  CCAATTCAACCTGTGAATACTTGGGAGATTTCCAGCCTTCCAAGCTCTACTGTGACTTCAGAGACACTGCCAAG  296
            |||.||||.|||||||.|||||||||||||.||||||||||||||.||.|.|||||.|||||.||.|||||..|
Sbjct  223  CCAGTTCAGCCTGTGACTACTTGGGAGATTGCCAGCCTTCCAAGCACTGCCGTGACGTCAGAAACCCTGCCCGG  296

Query  297  CAGCCTTAGCCCTAGTGTAGAGAAATACAGGTATCAGGATGAAGATACACCTCCTCAAGAGCATATTTCCCCAC  370
            |||||||||||||...||||||||||||.||||||||||||||||...||.|||||..|||||||||||.||||
Sbjct  297  CAGCCTTAGCCCTCCAGTAGAGAAATACCGGTATCAGGATGAAGAGGTACTTCCTCCTGAGCATATTTCTCCAC  370

Query  371  AAATCACAAATGAAGTGATAGGTCCAGAATTGGTTCATGTCTCAGAGAAGAACTTATCAGAGATTGAGAATGTC  444
            ||.||||||||||.|||.|||||||||||.||||.||||||||||||||||||.|.||||||||||||||||||
Sbjct  371  AAGTCACAAATGAGGTGCTAGGTCCAGAACTGGTCCATGTCTCAGAGAAGAACCTGTCAGAGATTGAGAATGTC  444

Query  445  CATGGATTTGTTTCTCATTCTCATATTTCACCAATAAAGGCAAATCCTCCCCCAGTACTGGTCAACACAGATAG  518
            ||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||.||
Sbjct  445  CATGGATTTGTTTCTCATTCTCATATCTCACCAATAAAGGCAAATCCTCCTCCAGTGCTGGTCAACACAGACAG  518

Query  519  CTTGAAAACACCAACTTACGTTAATGGCACAGATGCAGATTATGAATATGAAGAAATCACACTTGAAAGGGGAA  592
            |||..|.|||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||||||||||
Sbjct  519  CTTAGAGACACCAACTTATGTTAATGGCACTGATGCAGATTATGAATATGAGGAAATCACACTTGAAAGGGGAA  592

Query  593  ATTCAGGGCTTGGTTTCAGCATTGCAG--AGTACGGACAACCCACACATTGGAGATGACTCAAGTATTTTCATT  664
            ||||.||.|||||||||||||||||||  .||||.||||||||||||||||||||||||||||||||||||||.
Sbjct  593  ATTCGGGTCTTGGTTTCAGCATTGCAGGAGGTACAGACAACCCACACATTGGAGATGACTCAAGTATTTTCATC  666

Query  665  ACCAAAATTATCACAGG-GGAGCAGCCGCCCAAGATGGGAAGATTGCGGGTCAATGACTGTATATTACAAGTAA  737
            ||||||||||||||||| |||||.||.|||||.||| ||||||||||||||.||||||||||||.|...|||||
Sbjct  667  ACCAAAATTATCACAGGCGGAGCGGCTGCCCAGGAT-GGAAGATTGCGGGTAAATGACTGTATACTGAGAGTAA  739

Query  738  ATGAAGTAGATGTTCGTGATGTAACACATAGCAAAGCAGTTGAAGCGTTGAAAGAAGCAGGGTCTATTGTACGC  811
            ||||||.|||.||||||||||||||.||.|||||||||||.||.||.||.||||||||.||.||||||||.||.
Sbjct  740  ATGAAGCAGACGTTCGTGATGTAACCCACAGCAAAGCAGTGGAGGCATTAAAAGAAGCTGGATCTATTGTGCGA  813

Query  812  TTGTATGTAAAAAGAAGGAAACCAGTGTCAGAAAAAATAATGGAAATAAAGCTCATTAAAGGTCCTAAAGGTCT  885
            ||||||||.|||||..||||.||||..|||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  814  TTGTATGTGAAAAGGCGGAAGCCAGCATCAGAAAAAATCATGGAAATAAAGCTCATTAAAGGTCCTAAAGGTCT  887

Query  886  TGGGTTTAGCATTGCTGGAGGTGTTGGAAATCAGCATATTCCTGGGGATAATAGCATCTATGTAACCAAAATAA  959
            ||||||.|||||||||||||||||||||||||||||.||||||||.|||||.||||||||||||||||||||||
Sbjct  888  TGGGTTCAGCATTGCTGGAGGTGTTGGAAATCAGCACATTCCTGGTGATAACAGCATCTATGTAACCAAAATAA  961

Query  960  TTGAAGGAGGTGCAGCACATAAGGATGGCAAACTTCAGATTGGAGATAAACTTTTAGCAGTGAATAACGTATGT  1033
            |||||||||||||||||||.|||||||||||.|||||||||||||||||.|||.||||||||||.|..||.|||
Sbjct  962  TTGAAGGAGGTGCAGCACACAAGGATGGCAAGCTTCAGATTGGAGATAAGCTTCTAGCAGTGAACAGTGTGTGT  1035

Query 1034  TTAGAAGAAGTTACTCATGAAGAAGCAGTAACTGCCTTAAAGAACACATCTGATTTTGTTTATTTGAAAGTGGC  1107
            |||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 1036  TTAGAAGAAGTTACTCATGAAGAAGCAGTGACTGCCTTAAAGAATACATCTGATTTTGTTTATTTGAAAGTGGC  1109

Query 1108  AAAACCCACAAGTATGTATATGAATGATGGCTATGCACCACCTGATATCACCAACTCTTCTTCTCAGCCTGTTG  1181
            ||||||.||||||||||||||.|||||||||||||||||||||||.|||||.||.|||||||||||..||||||
Sbjct 1110  AAAACCAACAAGTATGTATATAAATGATGGCTATGCACCACCTGACATCACTAATTCTTCTTCTCAATCTGTTG  1183

Query 1182  ATAACCATGTTAGCCCATCTTCCTTCTTGGGCCAGACACCAGCATCTCCAGCCAGATACTC-CCCAGTTTCTAA  1254
            |.||||||||.|||||.||.||||.||||||||||||.|||.|.||.||||||||.||||| |||| |||||||
Sbjct 1184  ACAACCATGTCAGCCCGTCCTCCTGCTTGGGCCAGACGCCAACGTCACCAGCCAGGTACTCACCCA-TTTCTAA  1256

Query 1255  AGCAGTACTTGGAGATGATGAAATTACAAGGGAACCTAGAAAAGTTGTTCTTCATCGTGGCTCAACGGGCCTTG  1328
            |||.||.||.||||||||.||.||.||.||||||||||||||||||||||||||||||||||||||.||.||||
Sbjct 1257  AGCTGTGCTCGGAGATGACGAGATCACTAGGGAACCTAGAAAAGTTGTTCTTCATCGTGGCTCAACAGGACTTG  1330

Query 1329  GTTTCAACATTGTAGGAGGAGAAGATGGAGAAGGAATATTTATTTCCTTTATCTTAGCCGGAGGACCTGCTGAT  1402
            ||||.||||||||.|||||.||||||||||||||.||.|||||.|||||.|||.|.||.||.||||||||||||
Sbjct 1331  GTTTTAACATTGTGGGAGGTGAAGATGGAGAAGGGATTTTTATCTCCTTCATCCTTGCTGGCGGACCTGCTGAT  1404

Query 1403  CTAAGTGGAGAGCTCAGAAAAGGAGATCGTATTATATCGGTAAACAGTGTTGACCTCAGAGCTGCTAGTCATGA  1476
            |||||||||||||||||||||||||||||.||.||||||||.|||||||||||||||||||||||.|||||.||
Sbjct 1405  CTAAGTGGAGAGCTCAGAAAAGGAGATCGCATCATATCGGTGAACAGTGTTGACCTCAGAGCTGCAAGTCACGA  1478

Query 1477  GCAGGCAGCAGCTGCATTGAAAAATGCTGGCCAGGCTGTCACAATTGTTGCACAATATCGACCTGAAGAATACA  1550
            .||.||||||||||||.|.||.||.||.|||||.||.|||||.||.|||||.|||||||||||.|||||.||||
Sbjct 1479  ACAAGCAGCAGCTGCACTAAAGAACGCAGGCCAAGCCGTCACCATCGTTGCGCAATATCGACCCGAAGAGTACA  1552

Query 1551  GTCGTTTTGAAGCTAAAATACATGATTTACGGGAGCAGATGATGAATAGTAGTATTAGTTCAGGGTCAGGTTCT  1624
            |||||||||||||||||||.|||||.|||||||||||||||||||||||.|||.|.||||||||||||||.|||
Sbjct 1553  GTCGTTTTGAAGCTAAAATCCATGACTTACGGGAGCAGATGATGAATAGCAGTGTCAGTTCAGGGTCAGGGTCT  1626

Query 1625  CTTCGAACTAGCCAGAAGCGATCCCTCTATGTCAGAGCCCTTTTTGATTATGACAAGACTAAAGACAGTGGGCT  1698
            ||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||||||||.|||||.|||||
Sbjct 1627  CTTCGAACCAGCCAGAAGCGCTCCCTCTATGTCAGAGCCCTCTTTGATTATGACAAGACTAAGGACAGCGGGCT  1700

Query 1699  TCCCAGTCAGGGACTGAACTTCAAATTTGGAGATATCCTCCATGTTATTAATGCTTCTGATGATGAATGGTGGC  1772
            |||||||||.||||||||||||...||||||||.|||||||||||.||.|||||||||||.||.||.|||||||
Sbjct 1701  TCCCAGTCAAGGACTGAACTTCCGCTTTGGAGACATCCTCCATGTCATCAATGCTTCTGACGACGAGTGGTGGC  1774

Query 1773  AAGCCAGGCAGGTTACACCAGATGGTGAGAGCGATGAGGTCGGAGTGATTCCCAGTAAACGCAGAGTTGAGAAG  1846
            |||||||||||||.||.|||||.||.|||||.||.||.||||||||||||||.||||||||.||||||||||||
Sbjct 1775  AAGCCAGGCAGGTCACCCCAGACGGGGAGAGTGACGAAGTCGGAGTGATTCCTAGTAAACGAAGAGTTGAGAAG  1848

Query 1847  AAAGAACGAGCCCGATTAAAAACAGTGAAATTCAATTCTAAAACGA---GAGATAAAGGGCAGTCATTC--AAT  1915
            ||.||||||||||||||||||||.||.|||||||||||||||||.|   |||||||||||.||  ||.|  .|.
Sbjct 1849  AAGGAACGAGCCCGATTAAAAACGGTCAAATTCAATTCTAAAACAAGAGGAGATAAAGGGGAG--ATCCCTGAC  1920

Query 1916  GACAAGCG-TAAAAAGAACCTCTTTTCCCGAA------AATTCCCCTTCTACAAGAACAAGGACCAG----AGT  1978
            ||||.|.| |.|||||         .||.|||      ||     |||||| |.|        ||||    |||
Sbjct 1921  GACATGGGATCAAAAG---------GCCTGAAGCACGTAA-----CTTCTA-ATG--------CCAGCGATAGT  1971

Query 1979  GAGCAGGAAACAAGTGATGCTCACAAGTATGTA-TATGAATGATGGCTATGCACCACCTGATATCACCAACTGT  2051
            ||                      |||||..|| .|||||| |||||  |||           |||  ||..||
Sbjct 1972  GA----------------------AAGTAGTTACCATGAAT-ATGGC--TGC-----------TCA--AAAGGT  2007

Query 2052  GGTCAAGAAGAATACGTCTTATCTTATGAACCAGTGAATCAACAAGAAGTTAATTATACTCGACCAGTGATCAT  2125
            ||||||||||||||.||.|||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||
Sbjct 2008  GGTCAAGAAGAATATGTTTTATCTTATGAGCCAGTGAATCAACAAGAAGTTAATTATACCCGACCAGTCATCAT  2081

Query 2126  ATTGGGACCTATGAAAGACAGGATAAATGATGACTTGATCTCAGAATTTCCTGACAAATTTGGATCCTGTGTTC  2199
            |||.|||||||||||||||||..|||||||||||||.|||||||||||||||||||||||||||||||||||.|
Sbjct 2082  ATTAGGACCTATGAAAGACAGAGTAAATGATGACTTAATCTCAGAATTTCCTGACAAATTTGGATCCTGTGTCC  2155

Query 2200  CTCATACAACTAGACCAAAACGAGATTATGAGGTAGATGGAAGAGATTATCATTTTGTGACTTCAAGAGAGCAG  2273
            ||||||||||||||||.||.||.||.||||||||.||||||.|||||||||||||||||||||||||.||.|||
Sbjct 2156  CTCATACAACTAGACCGAAGCGTGACTATGAGGTGGATGGACGAGATTATCATTTTGTGACTTCAAGGGAACAG  2229

Query 2274  ATGGAAAAAGATATCCAGGAACATAAATTCATTGAAGCTGGCCAGTATAACAATCATCTATATGGAACAAGTGT  2347
            ||||||||.|||||.|||||.|||||.|||||||||||.||||||||||||||.|||||.|||||.||.||.||
Sbjct 2230  ATGGAAAAGGATATTCAGGAGCATAAGTTCATTGAAGCCGGCCAGTATAACAACCATCTGTATGGGACGAGCGT  2303

Query 2348  TCAGTCTGTACGAGAAGTAGCAGAAAAGGGCAAACACTGTATCCTTGATGTGTCTGGAAATGCCATAAAGAGAT  2421
            .|||||.||.||||.|||.|||||.|||||||||||.|||||||||||||||||||||||||||||||||||.|
Sbjct 2304  GCAGTCCGTGCGAGCAGTGGCAGAGAAGGGCAAACATTGTATCCTTGATGTGTCTGGAAATGCCATAAAGAGGT  2377

Query 2422  TACAGATTGCACAGCTTTACCCTATCTCCATTTTTATTAAACCCAAATCCATGGAAAATATCATGGAAATGAAT  2495
            |.|||||||||||||||||.||.||.||.||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 2378  TGCAGATTGCACAGCTTTATCCAATATCTATTTTTATTAAACCCAAATCCATGGAAAATATCATGGAAATGAAC  2451

Query 2496  AAGCGTCTAACAGAAGAACAAGCCAGAAAAACATTTGAGAGAGCCATGAAACTGGAACAGGAGTTTACTGAACA  2569
            |||||.|||||||||||.||.|||||||||||||||||||||||||||||.|||||.||||||||.|||||.||
Sbjct 2452  AAGCGCCTAACAGAAGAGCAGGCCAGAAAAACATTTGAGAGAGCCATGAAGCTGGAGCAGGAGTTCACTGAGCA  2525

Query 2570  TTTCACAGCTATTGTACAGGGGGATACGCTGGAAGACATTTACAACCAAGTGAAACAGATCATAGAAGAACAAT  2643
            |||||||||||||||.|||||.||.||||||||.|||||||||||||||||||||||||||||.||||||||.|
Sbjct 2526  TTTCACAGCTATTGTCCAGGGAGACACGCTGGAGGACATTTACAACCAAGTGAAACAGATCATCGAAGAACAGT  2599

Query 2644  CTGGTTCTTACATCTGGGTTCCGGCAAAAGAAAAGCTA  2681
            ||||..|||||||||||||.||.||.||||||||||||
Sbjct 2600  CTGGGCCTTACATCTGGGTCCCAGCGAAAGAAAAGCTA  2637

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