Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14615
Subject:
XM_017316867.1
Aligned Length:
2760
Identities:
2084
Gaps:
382

Alignment

Query    1  ATG-----CCGGTCCGGAAGCAAGA--------TACCCAGAGAGCATTGCACC--TTTTGGAGGAATATCGTTC  59
            |||     |...|.|||||.|||.|        |||.|        |.||.||  |...|||||         |
Sbjct    1  ATGAATTACATTTTCGGAAACAACACACTTCTGTACTC--------TCGCGCCAGTCGAGGAGG---------C  57

Query   60  AAAACTA-----AGCCAAACTGAAGACAGACAGCTCAGAAGTTCCATAGAACGGGTTATTAACATATTTCAGAG  128
            ||..|||     |||||   ||          ||||||.||..||..||                    |||| 
Sbjct   58  AATGCTAGCTCTAGCCA---TG----------GCTCAGTAGGCCCTAAG--------------------CAGA-  97

Query  129  CAACCTCTTTCAGGCTTTAATAGATATTCAAGAATTTTATGAAGTGACCTTACTGGATAATCCAAAATGTATAG  202
             |||                                               |||||..||   ||||.|    |
Sbjct   98  -AAC-----------------------------------------------ACTGGGCAA---AAAAGG----G  116

Query  203  ATCGTTCAAAGCCGTCTGAACCAATTCAA-CCTGTGAATACTTGGGAGATTTCC--AGCCTTCCAAGCTCTACT  273
            .||| |||.|      |||||   |.||| ||             |||    ||  ||||||||        |.
Sbjct  117  CTCG-TCAGA------TGAAC---TGCAAGCC-------------GAG----CCAGAGCCTTCC--------CG  155

Query  274  GTGACTTCAGAGA-----------CACTGCCAAG---CAGCCTTAGCCCTAGTGTAGAGAAATACA----GGTA  329
            .||.|..||||.|           |||| |.|||   ||||.|||    |.|        |.|.||    ||||
Sbjct  156  CTGGCAGCAGATAGTTGCATTCTTCACT-CGAAGACACAGCTTTA----TTG--------ACTGCATCTCGGTA  216

Query  330  TCAGGATGAAGATACACCTCCTCAAGAGCATATTTCCCCACAAATCACAAATGAAG-TGATAGGTCCAGAATTG  402
            .|            ||||        |||     |||.|.||...||||   |||| ||.|....||       
Sbjct  217  GC------------CACC--------AGC-----TCCACCCAGCCCACA---GAAGCTGTTCCTCCC-------  255

Query  403  GTTCATGTCTCAGAGAAGAACTTATCAGAGATTGA----------GAATGTCCATG----GATTTGTTTC-TCA  461
              ||.|.||.||         ||.||...|  |||          |...||||.||    ||.|..|.|| ||.
Sbjct  256  --TCCTCTCCCA---------TTGTCCCTG--TGACCCCTGCCCTGCCAGTCCCTGCTGAGAGTACTGTCGTCC  316

Query  462  TTCTCATATTTCACCAATAAAGGCAAATCCTCCCCCAGTACTGGTCAACACAGATAGCTTGAAAACACCAACTT  535
            |.|.|     ||..||..|.|||||||||||||.|||||.||||||||||||||.|||||..|.||||||||||
Sbjct  317  TGCCC-----TCCGCACCACAGGCAAATCCTCCTCCAGTGCTGGTCAACACAGACAGCTTAGAGACACCAACTT  385

Query  536  ACGTTAATGGCACAGATGCAGATTATGAATATGAAGAAATCACACTTGAAAGGGGAAATTCAGGGCTTGGTTTC  609
            |.|||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||.||.|||||||||
Sbjct  386  ATGTTAATGGCACTGATGCAGATTATGAATATGAGGAAATCACACTTGAAAGGGGAAATTCGGGTCTTGGTTTC  459

Query  610  AGCATTGCAG--AGTACGGACAACCCACACATTGGAGATGACTCAAGTATTTTCATTACCAAAATTATCACAGG  681
            ||||||||||  .||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  460  AGCATTGCAGGAGGTACAGACAACCCACACATTGGAGATGACTCAAGTATTTTCATCACCAAAATTATCACAGG  533

Query  682  -GGAGCAGCCGCCCAAGATGGGAAGATTGCGGGTCAATGACTGTATATTACAAGTAAATGAAGTAGATGTTCGT  754
             |||||.||.|||||.||| ||||||||||||||.||||||||||||.|...|||||||||||.|||.||||||
Sbjct  534  CGGAGCGGCTGCCCAGGAT-GGAAGATTGCGGGTAAATGACTGTATACTGAGAGTAAATGAAGCAGACGTTCGT  606

Query  755  GATGTAACACATAGCAAAGCAGTTGAAGCGTTGAAAGAAGCAGGGTCTATTGTACGCTTGTATGTAAAAAGAAG  828
            ||||||||.||.|||||||||||.||.||.||.||||||||.||.||||||||.||.||||||||.|||||..|
Sbjct  607  GATGTAACCCACAGCAAAGCAGTGGAGGCATTAAAAGAAGCTGGATCTATTGTGCGATTGTATGTGAAAAGGCG  680

Query  829  GAAACCAGTGTCAGAAAAAATAATGGAAATAAAGCTCATTAAAGGTCCTAAAGGTCTTGGGTTTAGCATTGCTG  902
            |||.||||..|||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct  681  GAAGCCAGCATCAGAAAAAATCATGGAAATAAAGCTCATTAAAGGTCCTAAAGGTCTTGGGTTCAGCATTGCTG  754

Query  903  GAGGTGTTGGAAATCAGCATATTCCTGGGGATAATAGCATCTATGTAACCAAAATAATTGAAGGAGGTGCAGCA  976
            |||||||||||||||||||.||||||||.|||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  755  GAGGTGTTGGAAATCAGCACATTCCTGGTGATAACAGCATCTATGTAACCAAAATAATTGAAGGAGGTGCAGCA  828

Query  977  CATAAGGATGGCAAACTTCAGATTGGAGATAAACTTTTAGCAGTGAATAACGTATGTTTAGAAGAAGTTACTCA  1050
            ||.|||||||||||.|||||||||||||||||.|||.||||||||||.|..||.||||||||||||||||||||
Sbjct  829  CACAAGGATGGCAAGCTTCAGATTGGAGATAAGCTTCTAGCAGTGAACAGTGTGTGTTTAGAAGAAGTTACTCA  902

Query 1051  TGAAGAAGCAGTAACTGCCTTAAAGAACACATCTGATTTTGTTTATTTGAAAGTGGCAAAACCCACAAGTATGT  1124
            ||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||.||||      
Sbjct  903  TGAAGAAGCAGTGACTGCCTTAAAGAATACATCTGATTTTGTTTATTTGAAAGTGGCAAAACCAACAA------  970

Query 1125  ATATGAATGATGGCTATGCACCACCTGATATCACCAACTCTTCTTCTCAGCCTGTTGATAACCATGTTAGCCCA  1198
                                                   ||||||||||..|||||||.||||||||.|||||.
Sbjct  971  ---------------------------------------CTTCTTCTCAATCTGTTGACAACCATGTCAGCCCG  1005

Query 1199  TCTTCCTTCTTGGGCCAGACACCAGCATCTCCAGCCAGATACTC-CCCAGTTTCTAAAGCAGTACTTGGAGATG  1271
            ||.||||.||||||||||||.|||.|.||.||||||||.||||| |||| ||||||||||.||.||.|||||||
Sbjct 1006  TCCTCCTGCTTGGGCCAGACGCCAACGTCACCAGCCAGGTACTCACCCA-TTTCTAAAGCTGTGCTCGGAGATG  1078

Query 1272  ATGAAATTACAAGGGAACCTAGAAAAGTTGTTCTTCATCGTGGCTCAACGGGCCTTGGTTTCAACATTGTAGGA  1345
            |.||.||.||.||||||||||||||||||||||||||||||||||||||.||.||||||||.||||||||.|||
Sbjct 1079  ACGAGATCACTAGGGAACCTAGAAAAGTTGTTCTTCATCGTGGCTCAACAGGACTTGGTTTTAACATTGTGGGA  1152

Query 1346  GGAGAAGATGGAGAAGGAATATTTATTTCCTTTATCTTAGCCGGAGGACCTGCTGATCTAAGTGGAGAGCTCAG  1419
            ||.||||||||||||||.||.|||||.|||||.|||.|.||.||.|||||||||||||||||||||||||||||
Sbjct 1153  GGTGAAGATGGAGAAGGGATTTTTATCTCCTTCATCCTTGCTGGCGGACCTGCTGATCTAAGTGGAGAGCTCAG  1226

Query 1420  AAAAGGAGATCGTATTATATCGGTAAACAGTGTTGACCTCAGAGCTGCTAGTCATGAGCAGGCAGCAGCTGCAT  1493
            ||||||||||||.||.||||||||.|||||||||||||||||||||||.|||||.||.||.||||||||||||.
Sbjct 1227  AAAAGGAGATCGCATCATATCGGTGAACAGTGTTGACCTCAGAGCTGCAAGTCACGAACAAGCAGCAGCTGCAC  1300

Query 1494  TGAAAAATGCTGGCCAGGCTGTCACAATTGTTGCACAATATCGACCTGAAGAATACAGTCGTTTTGAAGCTAAA  1567
            |.||.||.||.|||||.||.|||||.||.|||||.|||||||||||.|||||.|||||||||||||||||||||
Sbjct 1301  TAAAGAACGCAGGCCAAGCCGTCACCATCGTTGCGCAATATCGACCCGAAGAGTACAGTCGTTTTGAAGCTAAA  1374

Query 1568  ATACATGATTTACGGGAGCAGATGATGAATAGTAGTATTAGTTCAGGGTCAGGTTCTCTTCGAACTAGCCAGAA  1641
            ||.|||||.|||||||||||||||||||||||.|||.|.||||||||||||||.|||||||||||.||||||||
Sbjct 1375  ATCCATGACTTACGGGAGCAGATGATGAATAGCAGTGTCAGTTCAGGGTCAGGGTCTCTTCGAACCAGCCAGAA  1448

Query 1642  GCGATCCCTCTATGTCAGAGCCCTTTTTGATTATGACAAGACTAAAGACAGTGGGCTTCCCAGTCAGGGACTGA  1715
            |||.||||||||||||||||||||.||||||||||||||||||||.|||||.||||||||||||||.|||||||
Sbjct 1449  GCGCTCCCTCTATGTCAGAGCCCTCTTTGATTATGACAAGACTAAGGACAGCGGGCTTCCCAGTCAAGGACTGA  1522

Query 1716  ACTTCAAATTTGGAGATATCCTCCATGTTATTAATGCTTCTGATGATGAATGGTGGCAAGCCAGGCAGGTTACA  1789
            |||||...||||||||.|||||||||||.||.|||||||||||.||.||.||||||||||||||||||||.||.
Sbjct 1523  ACTTCCGCTTTGGAGACATCCTCCATGTCATCAATGCTTCTGACGACGAGTGGTGGCAAGCCAGGCAGGTCACC  1596

Query 1790  CCAGATGGTGAGAGCGATGAGGTCGGAGTGATTCCCAGTAAACGCAGAGTTGAGAAGAAAGAACGAGCCCGATT  1863
            |||||.||.|||||.||.||.||||||||||||||.||||||||.||||||||||||||.||||||||||||||
Sbjct 1597  CCAGACGGGGAGAGTGACGAAGTCGGAGTGATTCCTAGTAAACGAAGAGTTGAGAAGAAGGAACGAGCCCGATT  1670

Query 1864  AAAAACAGTGAAATTCAATTCTAAAACGA---GAGATAAAGGGCAGTCATTC--AATGACAAGCG-TAAAAAGA  1931
            ||||||.||.|||||||||||||||||.|   |||||||||||.||  ||.|  .|.||||.|.| |.||||| 
Sbjct 1671  AAAAACGGTCAAATTCAATTCTAAAACAAGAGGAGATAAAGGGGAG--ATCCCTGACGACATGGGATCAAAAG-  1741

Query 1932  ACCTCTTTTCCCGAA------AATTCCCCTTCTACAAGAACAAGGACCAG----AGTG--AGCAGGAAACAAGT  1993
                    .||.|||      ||     |||||| |.|        ||||    ||||  ||.||..|.|.|.|
Sbjct 1742  --------GCCTGAAGCACGTAA-----CTTCTA-ATG--------CCAGCGATAGTGAAAGTAGTTACCTAAT  1793

Query 1994  GATGCTCACAAGTATGTATATGAATGATGGCTATGCACCACCTGATATCACCAACTGTGGTCAAGAAGAATACG  2067
            ..||.|.||        |.|||||| |||||  |||           |||  ||..||||||||||||||||.|
Sbjct 1794  CTTGATTAC--------AGATGAAT-ATGGC--TGC-----------TCA--AAAGGTGGTCAAGAAGAATATG  1843

Query 2068  TCTTATCTTATGAACCAGTGAATCAACAAGAAGTTAATTATACTCGACCAGTGATCATATTGGGACCTATGAAA  2141
            |.|||||||||||.|||||||||||||||||||||||||||||.||||||||.||||||||.||||||||||||
Sbjct 1844  TTTTATCTTATGAGCCAGTGAATCAACAAGAAGTTAATTATACCCGACCAGTCATCATATTAGGACCTATGAAA  1917

Query 2142  GACAGGATAAATGATGACTTGATCTCAGAATTTCCTGACAAATTTGGATCCTGTGTTCCTCATACAACTAGACC  2215
            |||||..|||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1918  GACAGAGTAAATGATGACTTAATCTCAGAATTTCCTGACAAATTTGGATCCTGTGTCCCTCATACAACTAGACC  1991

Query 2216  AAAACGAGATTATGAGGTAGATGGAAGAGATTATCATTTTGTGACTTCAAGAGAGCAGATGGAAAAAGATATCC  2289
            .||.||.||.||||||||.||||||.|||||||||||||||||||||||||.||.|||||||||||.|||||.|
Sbjct 1992  GAAGCGTGACTATGAGGTGGATGGACGAGATTATCATTTTGTGACTTCAAGGGAACAGATGGAAAAGGATATTC  2065

Query 2290  AGGAACATAAATTCATTGAAGCTGGCCAGTATAACAATCATCTATATGGAACAAGTGTTCAGTCTGTACGAGAA  2363
            ||||.|||||.|||||||||||.||||||||||||||.|||||.|||||.||.||.||.|||||.||.||||.|
Sbjct 2066  AGGAGCATAAGTTCATTGAAGCCGGCCAGTATAACAACCATCTGTATGGGACGAGCGTGCAGTCCGTGCGAGCA  2139

Query 2364  GTAGCAGAAAAGGGCAAACACTGTATCCTTGATGTGTCTGGAAATGCCATAAAGAGATTACAGATTGCACAGCT  2437
            ||.|||||.|||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct 2140  GTGGCAGAGAAGGGCAAACATTGTATCCTTGATGTGTCTGGAAATGCCATAAAGAGGTTGCAGATTGCACAGCT  2213

Query 2438  TTACCCTATCTCCATTTTTATTAAACCCAAATCCATGGAAAATATCATGGAAATGAATAAGCGTCTAACAGAAG  2511
            |||.||.||.||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||
Sbjct 2214  TTATCCAATATCTATTTTTATTAAACCCAAATCCATGGAAAATATCATGGAAATGAACAAGCGCCTAACAGAAG  2287

Query 2512  AACAAGCCAGAAAAACATTTGAGAGAGCCATGAAACTGGAACAGGAGTTTACTGAACATTTCACAGCTATTGTA  2585
            |.||.|||||||||||||||||||||||||||||.|||||.||||||||.|||||.|||||||||||||||||.
Sbjct 2288  AGCAGGCCAGAAAAACATTTGAGAGAGCCATGAAGCTGGAGCAGGAGTTCACTGAGCATTTCACAGCTATTGTC  2361

Query 2586  CAGGGGGATACGCTGGAAGACATTTACAACCAAGTGAAACAGATCATAGAAGAACAATCTGGTTCTTACATCTG  2659
            |||||.||.||||||||.|||||||||||||||||||||||||||||.||||||||.|||||..||||||||||
Sbjct 2362  CAGGGAGACACGCTGGAGGACATTTACAACCAAGTGAAACAGATCATCGAAGAACAGTCTGGGCCTTACATCTG  2435

Query 2660  GGTTCCGGCAAAAGAAAAGCTA  2681
            |||.||.||.||||||||||||
Sbjct 2436  GGTCCCAGCGAAAGAAAAGCTA  2457

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