Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14689
• Subject: XM_006504396.3
• Aligned Length: 1961
• Identities: 1419
• Gaps: 358

Alignment

Query    1  ATGAGGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAACGTATGGGAGAGGAAGGAAGCGAGTTGCCCGTGTG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct    1  ATGAGGTTGACGCTACTTTGTTGCACCTGGAGGGAAGAACGTATGGGAGAGGAAGGAAGCGAGTTGCCTGTGTG  74

Query   75  TGCAAGCTGCGGCCAGAGGATCTATGATGGCCAGTACCTCCAGGCCCTGAACGCGGACTGGCACGCAGACTGCT  148
            |||.|||||.|||||||||||||||||.|||||||||||||||||||||||.||.||||||||.||||||||||
Sbjct   75  TGCGAGCTGTGGCCAGAGGATCTATGACGGCCAGTACCTCCAGGCCCTGAATGCTGACTGGCATGCAGACTGCT  148

Query  149  TCAGGTGTTGTGACTGCAGTGCCTCCCTGTCGCACCAGTACTATGAGAAGGATGGGCAGCTCTTCTGCAAGAAG  222
            |||||||.||.||.||.||.|.||||||.||.|||||||||||.|||||||||||.||||||||||||||||||
Sbjct  149  TCAGGTGCTGCGAGTGTAGCGTCTCCCTTTCACACCAGTACTACGAGAAGGATGGACAGCTCTTCTGCAAGAAG  222

Query  223  GACTACTGGGCCCGCTATGGCGAGTCCTGCCATGGGTGCTCTGAGCAAATCACCAAGGGACTGGTTATGGTGGC  296
            ||||||||||||||||||||||||||.|||||.||||||||.|||||.||||||||.||.|||||.||||||||
Sbjct  223  GACTACTGGGCCCGCTATGGCGAGTCTTGCCACGGGTGCTCCGAGCACATCACCAAAGGGCTGGTCATGGTGGC  296

Query  297  TGGGGAGCTGAAGTACCACCCCGAGTGTTTCATCTGCCTCACGTGTGGGACCTTTATCGGTGACGGGGACACCT  370
            |||||||||||||||||||||.||||||||||||||||||.|.|||||.|.|||.||.||.||.||||||||||
Sbjct  297  TGGGGAGCTGAAGTACCACCCTGAGTGTTTCATCTGCCTCGCCTGTGGAAACTTCATTGGCGATGGGGACACCT  370

Query  371  ACACGCTGGTGGAGCACTCCAAGCTGTACTGCGGGCACTGCTACTACCAGACTGTGGTGACCCCCGTCATCGAG  444
            ||||.||||||||||||||||||||||||||.||.||.||||||||||||||.|||||.||.||.||||||||.
Sbjct  371  ACACACTGGTGGAGCACTCCAAGCTGTACTGTGGCCAGTGCTACTACCAGACCGTGGTAACTCCAGTCATCGAA  444

Query  445  CAGATCCTGCCTGACTCCCCTGGCTCCCACCTGCCCCACACCGTCACCCTGGTGTCCATCCCAGCCTCATCTCA  518
            ||||||||.||||||||.||.||||||||||||||||||||.||||||||.|||||.|||||||||||..|.||
Sbjct  445  CAGATCCTACCTGACTCACCCGGCTCCCACCTGCCCCACACAGTCACCCTCGTGTCTATCCCAGCCTCTGCCCA  518

Query  519  TGGCAAGCGTGGACTTTCAGTCTCCATTGACCCCCCGCACGGCCCACCGGGCTGTGGCACCGAGCACTCACACA  592
            ||||||.||.||.||.||.||||||||.||||||||.|||||||||||.||.||||||||.|||||.||.||||
Sbjct  519  TGGCAAACGAGGCCTGTCTGTCTCCATCGACCCCCCTCACGGCCCACCAGGATGTGGCACGGAGCATTCGCACA  592

Query  593  CCGTCCGCGTCCAGGGAGTGGATCCCGGGCTGCATGAGCCCAGATGTGAAGAATTCCATCCACGTCGGAGACCG  666
            |.|||||.|||||.|||||||| |||.||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  593  CTGTCCGAGTCCAAGGAGTGGA-CCCAGGCTGCATGAGCCCAGATGTGAAGAATTCCATCCACGTTGGAGACCG  665

Query  667  GATCTTGGAAATCAATGGCACGCCCATCCGAAATGTGCCCCTGGACGAGATTGACCTGCTGATTCAGGAAACCA  740
            ||||||||||||||||||||||||||||||.||||||||.|||||||||||.|||.|||||||.|||||.||||
Sbjct  666  GATCTTGGAAATCAATGGCACGCCCATCCGGAATGTGCCGCTGGACGAGATCGACTTGCTGATCCAGGAGACCA  739

Query  741  GCCGCCTGCTCCAGCTGACCCTCGAGCATGACCCTCACGATACACTGGGCCACGGGCTGGGGCCTGAGACCAGC  814
            ||||||||||||||||||||||||||||.|||||.||.||..||||||||||.||||..|.|.|.||..|||||
Sbjct  740  GCCGCCTGCTCCAGCTGACCCTCGAGCACGACCCCCATGACTCACTGGGCCATGGGCCCGTGTCGGATCCCAGC  813

Query  815  CCCCTGAGCTCTCCGGCTTATACTCCCAGCGGGGAGGCGGGCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAG  888
            |||||||||||.||||...|.|||||||||||..||||.|.|||||||||||||||||||||||||||||||||
Sbjct  814  CCCCTGAGCTCCCCGGTGCACACTCCCAGCGGACAGGCAGCCAGCTCTGCCCGGCAGAAACCTGTCTTGAGGAG  887

Query  889  CTGCAGCATCGACAGGTCTCCGGGCGCTGGCTCACTGGGCTCCCCGGCCTCCCAGCGCAAGGACCTGGGTCGCT  962
            ||||||.||.||||.|||.|||||..|..|||||||.|.|||.||.||||||||||||||||||||||||||||
Sbjct  888  CTGCAGTATTGACACGTCCCCGGGTACCAGCTCACTAGCCTCTCCAGCCTCCCAGCGCAAGGACCTGGGTCGCT  961

Query  963  CTGAGTCCCTCCGCGTAGTCTGCCGGCCACACCGCATCTTCCGGCCGTCGGACCTCATCCACGGGGAGGTGCTG  1036
            |.||.||||||||.||.||||||||.||||||||.|||||||||||.||.||.||||||||.|||||.||||||
Sbjct  962  CCGAATCCCTCCGAGTGGTCTGCCGACCACACCGAATCTTCCGGCCATCTGATCTCATCCATGGGGAAGTGCTG  1035

Query 1037  GGCAAGGGCTGCTTCGGCCAGGCTATCAAGGTGACACACCGTGAGACAGGTGAGGTGATGGTGATGAAGGAGCT  1110
            |||||||||||.||.||||||||.|||||||||||||||||.||.|||||.||||||||||||||||||||.||
Sbjct 1036  GGCAAGGGCTGTTTTGGCCAGGCCATCAAGGTGACACACCGAGAAACAGGCGAGGTGATGGTGATGAAGGAACT  1109

Query 1111  GATCCGGTTCGACGAGGAGACCCAGAGGACGTTCCTCAAGGAGGTGAAGGTCATGCGATGCCTGGAACACCCCA  1184
            .||||||||.||.|||||||||||||||||.||||||||||||||.|||||||||||.||||||||.|||||.|
Sbjct 1110  TATCCGGTTTGATGAGGAGACCCAGAGGACATTCCTCAAGGAGGTAAAGGTCATGCGCTGCCTGGAGCACCCTA  1183

Query 1185  ACGTGCTCAAGTTCATCGGGGTGCTCTAC-AGGACAGA---GCTCA--CTCATCACTGAGTACATCAAAGGGCG  1252
            |||||||||||||||||||.||||||||| |||||| |   |||.|  .|||||||.||||||||| |||||||
Sbjct 1184  ACGTGCTCAAGTTCATCGGAGTGCTCTACAAGGACA-AGCGGCTAAACTTCATCACAGAGTACATC-AAGGGCG  1255

Query 1253  GCACGCTCCGGGGCATCATCAAGAGCATGGACAGCCAGTACCCATGGAGCCAGAGAGTGAGCTTTGCCAAGGAC  1326
            ||||.||.||||||||||||||||.||||||||||||||||||.|||||.|||||.||.|||||||||||||||
Sbjct 1256  GCACCCTGCGGGGCATCATCAAGAACATGGACAGCCAGTACCCGTGGAGTCAGAGGGTCAGCTTTGCCAAGGAC  1329

Query 1327  ATCGCATCAGGGATGGCCTACCTCCACTCCATGAACATCATCCACCGAGACCTCAACTCCCACAACTGCCTGGT  1400
            ||.|||||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1330  ATTGCATCAGGGATGGCCTACCTCCATTCGATGAACATCATCCACCGAGACCTCAACTCCCACAACTGTCTGGT  1403

Query 1401  CCGCGAGAACAAGAATGTGGTGGTGGCTGACTTCGGGCTGGCGCGTCTCATGGTGGACGAGAAGACTCAGCCTG  1474
            |||.||                      |.||||                      ||    ||||.|..||||
Sbjct 1404  CCGTGA----------------------GCCTTC----------------------AC----AGACACCACCTG  1429

Query 1475  AGG--GCCTGCGGAGCCTCAAGAAGCCAG---ACCGCAAGAAGCGCTACACCGTG-GTGGGCAACCCCTACTGG  1542
            |||  |||    .||.||     |.||||   .|.||||.||..||.|||  ||| |||||||         ||
Sbjct 1430  AGGTAGCC----CAGGCT-----ACCCAGGCAGCAGCAACAACTGCAACA--GTGTGTGGGCA---------GG  1483

Query 1543  ATGGCACCTGAGATGATCAACGGCCGCAGCTATGATGAGAAGGTGGATGTGTTCTCCTTTGGGATCGTCCTGTG  1616
              ||||.|||           |||             |||             ||.|||  |.||.|       
Sbjct 1484  --GGCATCTG-----------GGC-------------AGA-------------CTTCTT--GAATTG-------  1509

Query 1617  CGAGA-TCATCGGGCGGGTGAACGCAGACCCTGACTACCTGCCCCGCA---CCATGGACTTTGGCCTCAACGTG  1686
             |||| |           ||   |||||                .|||   ||.||||    |||  |||    
Sbjct 1510  -GAGACT-----------TG---GCAGA----------------GGCATGTCCGTGGA----GGC--CAA----  1542

Query 1687  CGAGGATTCCTGGACCGCTACTGCCCCCCAAACTGCCCCCCGAGCTTCTTCCCCATCACCGTGCGCTGTT-GCG  1759
             ||||||....||               |||.|.|  ||||.||.||          ||.|      ||| |.|
Sbjct 1543  -GAGGATAAGAGG---------------CAATCAG--CCCCAAGTTT----------ACAG------GTTGGTG  1582

Query 1760  ATCTGGACCCCGAGAAGAGGCCATCCTTTGTGAAGCTGGAACACTGG------CTGGAGACCCTCCGCATGCAC  1827
            .|||  ||    |||                 |||..|||  |||||      ||||.||      |||.|   
Sbjct 1583  TTCT--AC----AGA-----------------AAGTAGGA--ACTGGCCCAAACTGGGGA------GCAAG---  1622

Query 1828  CTGGCCGGCCACCTGCCACTGGGCCCACAGCTGGAGCAGCTGGACAGAGGTTTCTGGGAGACCTACCGGCGCGG  1901
                         ||||                                                         
Sbjct 1623  -------------TGCC---------------------------------------------------------  1626

Query 1902  CGAGAGCGGACTGCCTGCCCACCCTGAGGTCCCCGAC  1938
                                                 
Sbjct 1627  -------------------------------------  1626