Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14719
- Subject:
- NM_001039181.1
- Aligned Length:
- 1629
- Identities:
- 1402
- Gaps:
- 28
Alignment
Query 1 ATGCCGTCTCTGCTGGTGGCGCACATTCTCCCCGTGCGTACTACTCGGCTGGGCGTTGCTGGCCGGCGGCACCG 74
||||.|||..|||||.| |..|||.|||||..|||||||.||.||.|.|.|||.|.|||||||.||||||
Sbjct 1 ATGCGGTCCTTGCTGCT-GTTCACTTTCTCGGCGTGCGTGCTGCTGGCCCGGGTGCTGCTGGCTGGCGGC---- 69
Query 75 GTGGCGGTGGCGTTGGCGGCGGCGGCGGTGG---CGCGGGCATAGGCGGCGGACGCCAGGAGAGAGAGGCGCTG 145
||| .||.||||||.||| || |.|||.| ||||.||.|.||||.||.|||||||||||||
Sbjct 70 ---GCG--------AGCAGCGGCGCCGG-GGACACCCGGCC--AGGCAGCAGGCGCCGGGCGAGAGAGGCGCTG 129
Query 146 CCGCCACAGAAGATCGAGGTGCTGGTGTTACTGCCCCAGGATGACTCGTACTTGTTTTCACTCACCCGGGTGCG 219
.||.|.||.||||||||||||||.||..||.||||||.|||.||.|||||||||||.||.||..||||||||.|
Sbjct 130 GCGGCTCAAAAGATCGAGGTGCTTGTTCTATTGCCCCGGGACGATTCGTACTTGTTCTCGCTGGCCCGGGTGAG 203
Query 220 GCCGGCCATCGAGTATGCTCTGCGCAGCGTGGAGGGCAACGGGACTGGGAGGCGGCTTCTGCCGCCGGGCACTC 293
|||||||||||||||.||.|||||.||||||||||||||.||.||.||||||..|||.||||||||.|||||||
Sbjct 204 GCCGGCCATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTC 277
Query 294 GCTTCCAGGTGGCTTACGAGGATTCAGACTGTGGGAACCGTGCGCTCTTCAG-CTTGGTGGACCGCGTGGCGGC 366
|||||||||||||.|||||.||.||.|||||.||.|||||.||||||||||| ||| |||||||||||||||||
Sbjct 278 GCTTCCAGGTGGCCTACGAAGACTCGGACTGCGGCAACCGCGCGCTCTTCAGTCTT-GTGGACCGCGTGGCGGC 350
Query 367 GGCGCGGGGCGCCAAGCCAGACCTTATCCTGGGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTG 440
||||||.|||||||||||.||.||.|||||||||||.|||||||||||.||.||.|||||.|||||.|||||.|
Sbjct 351 GGCGCGCGGCGCCAAGCCGGATCTCATCCTGGGGCCCGTGTGCGAGTACGCGGCGGCGCCGGTGGCTCGGCTGG 424
Query 441 CATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGGCGCTGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTAC 514
|.||.||||||||||||||.||||||||.||.||.|||||||||||.||.|||||||||||||||.|.||.|||
Sbjct 425 CGTCTCACTGGGACCTGCCGATGCTGTCCGCAGGAGCGCTGGCCGCCGGTTTCCAGCACAAGGACACGGAATAC 498
Query 515 TCGCACCTCACGCGCGTGGCGCCCGCCTACGCCAAGATGGGCGAGATGATGCTCGCCCTGTTCCGCCACCACCA 588
|||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||.|||||||||||
Sbjct 499 TCGCACCTCACGCGCGTGGCGCCTGCCTACGCCAAGATGGGAGAGATGATGCTCGCTCTGTTTCGCCACCACCA 572
Query 589 CTGGAGCCGCGCTGCACTGGTCTACAGCGACGACAAGCTGGAGCGGAACTGCTACTTCACCCTCGAGGGGGTCC 662
|||||||||.||.||.||||||||||||||||||||.||.|||.|||||||.||.|||||||||||||||||||
Sbjct 573 CTGGAGCCGTGCAGCCCTGGTCTACAGCGACGACAAACTCGAGAGGAACTGTTATTTCACCCTCGAGGGGGTCC 646
Query 663 ACGAGGTCTTCCAGGAGGAGGGTTTGCACACGTCCATCTACAGTTTCGACGAGACCAAAGACTTGGATCTGGAA 736
|||||||.||.|||||||||||.|||||||||||...|||||.||||||||||||||||||||||||.|||||.
Sbjct 647 ACGAGGTTTTTCAGGAGGAGGGGTTGCACACGTCTGCCTACAATTTCGACGAGACCAAAGACTTGGACCTGGAC 720
Query 737 GACATCGTGCGCAATATCCAGGCCAGTGAGAGAGTGGTGATCATGTGTGCGAGCAGTGACACCATCCGGAGCAT 810
|||||.||||||.|.|||||.|.|||.|||.|||||||||||||||||||.||..||||||||||.|||||.||
Sbjct 721 GACATAGTGCGCTACATCCAAGGCAGCGAGCGAGTGGTGATCATGTGTGCCAGTGGTGACACCATTCGGAGAAT 794
Query 811 CTCTGCTGGTGGCGCACAGGCATGGCATGACCAGTGGAGACTACGCCTTCTTCAACATTGAGCTCTTCAACAGC 884
| .||.|||.||.||||||.||.|||||||||||||||||||||||.||||||||||||||.|||||||||||.
Sbjct 795 C-ATGTTGGCGGTGCACAGACACGGCATGACCAGTGGAGACTACGCTTTCTTCAACATTGAACTCTTCAACAGT 867
Query 885 TCTTCCTATGGAGATGGCTCATGGAAGAGAGGAGACAAACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCT 958
||||||||.|||||||||||.||||.||||||||||||||||||||.|||||||||.|||||||||||||||||
Sbjct 868 TCTTCCTACGGAGATGGCTCGTGGAGGAGAGGAGACAAACACGACTCTGAAGCTAAACAAGCATACTCGTCCCT 941
Query 959 CCAGACAGTCACTCTACTGAGGACAGTGAAACCTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTTCAGTTG 1032
|||.||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 942 CCAAACAGTCACCCTACTGAGGACCGTGAAACCTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTTCTGTTG 1015
Query 1033 AGAAACAAGGGCTCAATATGGAGGATTACGTTAACATGTTTGTTGAAGGATTCCACGATGCCATCCTCCTCTAC 1106
|||||||||||||||||..||||||||||||.|||||||||||||||||.|||||.||.|||||||||||||||
Sbjct 1016 AGAAACAAGGGCTCAATGAGGAGGATTACGTGAACATGTTTGTTGAAGGGTTCCATGACGCCATCCTCCTCTAC 1089
Query 1107 GTCTTGGCTCTACATGAAGTACTCAGAGCTGGTTACAGCAAAAAGGATGGAGGGAAAATTATACAGCAGACTTG 1180
||..|||||.||||||||||||||||||||||.||||||||.||||||||.||||||||.||.|||||||||||
Sbjct 1090 GTTCTGGCTTTACATGAAGTACTCAGAGCTGGCTACAGCAAGAAGGATGGGGGGAAAATCATCCAGCAGACTTG 1163
Query 1181 GAACAGAACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTG 1254
||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||||
Sbjct 1164 GAACAGGACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGGACCGGTATGGGGACTTCTCTG 1237
Query 1255 TGATTGCCATGACTGATGTGGAGGCGGGCACCCAGGAGGTTATTGGTGATTATTTTGGAAAAGAAGGTCGTTTT 1328
||.|||||||||||||....||.||.||||||||.|||||.|||||||||||.|||||.||||||||.||.||.
Sbjct 1238 TGGTTGCCATGACTGACACTGAAGCAGGCACCCAAGAGGTCATTGGTGATTACTTTGGGAAAGAAGGCCGGTTC 1311
Query 1329 GAAATGCGGCCGAATGTCAAATATCCTTGGGGCCCTTTAAAACTGAGAATAGATGAAAACCGAATTGTAGAGCA 1402
.|||||||..||||||||||||||||||||||||||||.|||||||||.|||||||.|.|.||||.||.|||||
Sbjct 1312 CAAATGCGATCGAATGTCAAATATCCTTGGGGCCCTTTGAAACTGAGACTAGATGAGACCAGAATCGTGGAGCA 1385
Query 1403 TACAAACAGCTCTCCCTGCAAATCATCAGGTGGCCTAGAAGAATCGGCAGTGACAGGAATTGTCGTGGGGGCTT 1476
|||.|||||||||||.|||||||||| ||||||||||||||||.||||||||||||||.||.||||||||..
Sbjct 1386 TACCAACAGCTCTCCTTGCAAATCAT---GTGGCCTAGAAGAATCTGCAGTGACAGGAATCGTTGTGGGGGCCC 1456
Query 1477 TACTAGGAGCTGGCTTGCTAATGGCCTTCTACTTTTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAACC 1550
|||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..
Sbjct 1457 TACTAGGTGCTGGCTTGCTAATGGCCTTCTACTTTTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAAAT 1530
Query 1551 CAGCAAGAAGAAAGTAACCTTGGAAAACATCGGGAATTACGGGAAGATTCCATCAGATCCCATTTTTCAGTAGC 1624
||||||||.|||||.|||.|.||.||.|||||.||..|.||.|||||||||||||||||.||||||||.||.||
Sbjct 1531 CAGCAAGAGGAAAGCAACATCGGGAAGCATCGAGAGCTGCGAGAAGATTCCATCAGATCACATTTTTCGGTGGC 1604
Query 1625 T 1625
|
Sbjct 1605 T 1605