Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14719
- Subject:
- NM_001364460.2
- Aligned Length:
- 1629
- Identities:
- 827
- Gaps:
- 781
Alignment
Query 1 ATGCCGTCTCTGCTGGTGGCGCACATTCTCCCCGTGCGTACTACTCGGCTGGGCGTTGCTGGCCGGCGGCACCG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTGGCGGTGGCGTTGGCGGCGGCGGCGGTGGCGCGGGCATAGGCGGCGGACGCCAGGAGAGAGAGGCGCTGCCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCACAGAAGATCGAGGTGCTGGTGTTACTGCCCCAGGATGACTCGTACTTGTTTTCACTCACCCGGGTGCGGCC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GGCCATCGAGTATGCTCTGCGCAGCGTGGAGGGCAACGGGACTGGGAGGCGGCTTCTGCCGCCGGGCACTCGCT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TCCAGGTGGCTTACGAGGATTCAGACTGTGGGAACCGTGCGCTCTTCAGCTTGGTGGACCGCGTGGCGGCGGCG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CGGGGCGCCAAGCCAGACCTTATCCTGGGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GCACTGGGACCTGCCCATGCTGTCGGCTGGGGCGCTGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTACTCGC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACCTCACGCGCGTGGCGCCCGCCTACGCCAAGATGGGCGAGATGATGCTCGCCCTGTTCCGCCACCACCACTGG 592
.|||
Sbjct 1 ----------------------------------------------------------------------ATGG 4
Query 593 AGCCGCGCTGCACTGGTCTACAGCGACGACAAGCTGGAGCGGAACTGCTACTTCACCCTCGAGGGGGTCCACGA 666
|||| ..||||||||| ||| ||| |||||
Sbjct 5 AGCC-ATCTGCACTGG--------GAC-----------------------CTT------------GGTCC---- 30
Query 667 GGTCTTCCAGGAGGAGGGTTTGCACACGTCCATCTACAGTTTCGACGAGACCAAAGACTTGGATCTGGAAGACA 740
.|.||||..|| || ||.||.|||| |||.|.|||
Sbjct 31 -TTGTTCCCTGA-----------------CC--------TTGCGCCGAG-----------GGACCAGGA----- 62
Query 741 TCGTGCGCAATATCCAGGCCAGTGAGAGAGTGGTGATCATGTGTG---CGAG-CAGTGACACCATCCGGAGCAT 810
|||.|| ||||.|| | ||.| |.||| |.||.||||
Sbjct 63 ---------------AGGTCA----------GGTGCTC------GCCCCGCGTCGGTG----CTTCAGGAG--- 98
Query 811 CTCTGCTGGTGGCGCACAGGCATGGCATGACCAGTGGAGACTACGCCTTCTTCAACATTGAGCTCTTCAACAGC 884
||.||| ||.|||| ||| |||
Sbjct 99 ------------------GGAATG---TGGCCAG-------------------AAC---GAG------------ 117
Query 885 TCTTCCTATGGAGATGGCTCATGGAAGAGAGGAGACAAACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCT 958
.|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 ------AAAGGAGATGGCTCATGGAAGAGAGGAGACAAACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCT 185
Query 959 CCAGACAGTCACTCTACTGAGGACAGTGAAACCTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTTCAGTTG 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 186 CCAGACAGTCACTCTACTGAGGACAGTGAAACCTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTTCAGTTG 259
Query 1033 AGAAACAAGGGCTCAATATGGAGGATTACGTTAACATGTTTGTTGAAGGATTCCACGATGCCATCCTCCTCTAC 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 260 AGAAACAAGGGCTCAATATGGAGGATTACGTTAACATGTTTGTTGAAGGATTCCACGATGCCATCCTCCTCTAC 333
Query 1107 GTCTTGGCTCTACATGAAGTACTCAGAGCTGGTTACAGCAAAAAGGATGGAGGGAAAATTATACAGCAGACTTG 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 334 GTCTTGGCTCTACATGAAGTACTCAGAGCTGGTTACAGCAAAAAGGATGGAGGGAAAATTATACAGCAGACTTG 407
Query 1181 GAACAGAACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTG 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 408 GAACAGAACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTG 481
Query 1255 TGATTGCCATGACTGATGTGGAGGCGGGCACCCAGGAGGTTATTGGTGATTATTTTGGAAAAGAAGGTCGTTTT 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 482 TGATTGCCATGACTGATGTGGAGGCGGGCACCCAGGAGGTTATTGGTGATTATTTTGGAAAAGAAGGTCGTTTT 555
Query 1329 GAAATGCGGCCGAATGTCAAATATCCTTGGGGCCCTTTAAAACTGAGAATAGATGAAAACCGAATTGTAGAGCA 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 GAAATGCGGCCGAATGTCAAATATCCTTGGGGCCCTTTAAAACTGAGAATAGATGAAAACCGAATTGTAGAGCA 629
Query 1403 TACAAACAGCTCTCCCTGCAAATCATCAGGTGGCCTAGAAGAATCGGCAGTGACAGGAATTGTCGTGGGGGCTT 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 TACAAACAGCTCTCCCTGCAAATCATCAGGTGGCCTAGAAGAATCGGCAGTGACAGGAATTGTCGTGGGGGCTT 703
Query 1477 TACTAGGAGCTGGCTTGCTAATGGCCTTCTACTTTTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAACC 1550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 704 TACTAGGAGCTGGCTTGCTAATGGCCTTCTACTTTTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAACC 777
Query 1551 CAGCAAGAAGAAAGTAACCTTGGAAAACATCGGGAATTACGGGAAGATTCCATCAGATCCCATTTTTCAGTAGC 1624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 CAGCAAGAAGAAAGTAACCTTGGAAAACATCGGGAATTACGGGAAGATTCCATCAGATCCCATTTTTCAGTAGC 851
Query 1625 T 1625
|
Sbjct 852 T 852
