Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14805
- Subject:
- NM_001318131.1
- Aligned Length:
- 1404
- Identities:
- 723
- Gaps:
- 585
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACCTTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAAACACGTGGATGTGTCATCTATTGCCAAACATTACAACATGAGCAAAAGCAAGGTGGACAACCAGTTCTACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGTGGAAGTGGGGGACTCAACCTTCACCGTTCTTAAGCGCTACCAGAACCTGAAGCCAATTGGCTCTGGGGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGGAATAGTCTGTGCTGCGTACGACGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAGAACCAAACTCACGCCAAGAGGGCTTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTA 370
Query 1 -----------------------------------------------------------------ATGGAACTG 9
|||||||||
Sbjct 371 TTAGCTTATTAAATGTTTTTACACCCCAGAAAACACTGGAGGAGTTCCAAGATGTCTACTTAGTGATGGAACTG 444
Query 10 ATGGATGCCAACTTATGTCAAGTGATTCAGATGGAATTAGACCATGAGCGAATGTCTTACCTGCTGTACCAAAT 83
|||||.||||||.|.|||||.||||||||||||||..|.|||||.|||||.|||||||||.||||||||||.||
Sbjct 445 ATGGACGCCAACCTGTGTCAGGTGATTCAGATGGAGCTGGACCACGAGCGGATGTCTTACTTGCTGTACCAGAT 518
Query 84 GTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTATTCACAGGGATTTAAAACCAAGTAACATTGTAGTCA 157
|.||||||||||.|||||||||||.||.|||||.||.||.||||||||.||||||||.||||||||||||||||
Sbjct 519 GCTGTGTGGCATCAAGCACCTCCACTCCGCTGGGATCATCCACAGGGACTTAAAACCCAGTAACATTGTAGTCA 592
Query 158 AGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGGCCAGGACAGCAGGCACAAGCTTCATGATGACTCCA 231
||||||||||||||.||||||||||.|||||.|||||||||||||||||.||.||||||||||||||||||||.
Sbjct 593 AGTCTGATTGCACACTGAAAATCCTCGACTTCGGACTGGCCAGGACAGCGGGTACAAGCTTCATGATGACTCCG 666
Query 232 TATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATCCTGGGGATGGGCTACAAGGAGAACGTGGATATATG 305
|||||||||||.||.|||||||||||||||||||||||||||||.||||||||||||||||||||.||..|.||
Sbjct 667 TATGTGGTGACGCGATATTACAGAGCCCCTGAGGTCATCCTGGGCATGGGCTACAAGGAGAACGTTGACCTGTG 740
Query 306 GTCTGTGGGATGCATTATGGGAGAAATGGTTCGCCACAAAA-------TCCTCTTTCCAGGAAGGGACTATATT 372
|||.||.||.|||||.|||||||||||||| |||| |.||.||.||.||.|..||..|||||
Sbjct 741 GTCAGTAGGGTGCATCATGGGAGAAATGGT-------AAAAGGCACAGTGCTGTTCCCTGGCACTGATCATATT 807
Query 373 GACCAGTGGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAGAATTCATGAAGAAATTGCAACCCACAGT 446
|||||||||||.||.||.||.||.||.||||||||.||.||||||||.|||||||||||||||||.||||||||
Sbjct 808 GACCAGTGGAACAAAGTCATCGAGCAGCTAGGAACTCCGTGTCCAGAGTTCATGAAGAAATTGCAGCCCACAGT 881
Query 447 AAGAAACTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTCCCCAAACTCTTCCCAGATTCCCTCTTCC 520
.||||||||.||||||||||||||||||||.||.|||||||||||||||||.|||||.||||||||||||||||
Sbjct 882 CAGAAACTACGTGGAGAATCGGCCCAAGTACGCAGGACTCACCTTCCCCAAGCTCTTTCCAGATTCCCTCTTCC 955
Query 521 CAGCGGACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGACTTGTTGTCAAAGATGCTAGTGATTGAC 594
|||||||.||.||||||||||||||.||||||||||||||||||||.||||||||.||||||.|||||||||||
Sbjct 956 CAGCGGATTCTGAGCACAATAAACTTAAAGCCAGCCAAGCCAGGGATTTGTTGTCTAAGATGTTAGTGATTGAC 1029
Query 595 CCAGCAAAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACATCAACGTCTGGTATGACCCAGCCGAAGT 668
|||||.||.||.|||||.|||||||||||..|.||||||||.|||||||||||.|||||.|||||.||.|||||
Sbjct 1030 CCAGCGAAGAGGATATCGGTGGACGACGCACTGCAGCATCCGTACATCAACGTTTGGTACGACCCGGCTGAAGT 1103
Query 669 GGAGGCGCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGAGAACACACAATTGAAGAATGGAAAGAAC 742
||||||||||||.||||||||||||||.||||||.||||||||||.||.|||||.||.||||||||||||||||
Sbjct 1104 GGAGGCGCCTCCGCCTCAGATATATGATAAGCAGCTGGATGAAAGGGAGCACACCATCGAAGAATGGAAAGAAC 1177
Query 743 TTATCTACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGGTGTAGTAAAAGGACAGCCTTCTCCTT-- 814
|||||||||||||.||||||||.||||||||.||||||||.|||||.|||||.|||||.|||||.||.||||
Sbjct 1178 TTATCTACAAGGAGGTAATGAACTCAGAAGAGAAGACTAAGAATGGCGTAGTCAAAGGCCAGCCCTCGCCTTCA 1251
Query 815 ---CAGGTGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTCGTCTGTCAATGACATCTCCTCCATGTCC 885
||||||||||||
Sbjct 1252 GCACAGGTGCAGCAG----------------------------------------------------------- 1266
Query 886 ACCGACCAGACCCTGGCATCTGACACTGACAGCAGCCTGGAAGCCTCGGCAGGACCCCTGGGTTGTTGCAGG 957
Sbjct 1267 ------------------------------------------------------------------------ 1266