Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14805
- Subject:
- NM_016700.4
- Aligned Length:
- 1284
- Identities:
- 668
- Gaps:
- 459
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCAGAAGCAAACGTGACAACAATTTTTATAGTGTAGAGATTGGAGATTCTACATTCACAGTCCTAAAACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATACCAGAATTTAAAGCCTATAGGCTCAGGAGCTCAAGGAATAGTGTGTGCAGCTTATGATGCCATTCTTGAAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAATGTTGCAATCAAGAAGCTCAGCCGGCCATTTCAGAATCAGACCCATGCTAAGCGCGCCTACCGAGAACTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTCTTATGAAGTGTGTTAATCACAAAAATATAATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGA 296
Query 1 -------------------------ATGGAACTGATGGATGCCAA-CTTATGTCAAGTGATTCAGATGGAATTA 48
|||||.||.||||||||.|| ||| ||.|||||||||||||||||.|||
Sbjct 297 AGAATTTCAAGATGTTTACATAGTCATGGAGCTCATGGATGCAAATCTT-TGCCAAGTGATTCAGATGGAGTTA 369
Query 49 GACCATGAGCGAATGTCTTACCTGCTGTACCAAATGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTAT 122
||.|||||..|||||||.|||||.||.||.||||||.|||||||.||.||||||||.||.||||||||||||||
Sbjct 370 GATCATGAAAGAATGTCCTACCTTCTCTATCAAATGCTGTGTGGAATCAAGCACCTTCACTCTGCTGGAATTAT 443
Query 123 TCACAGGGATTTAAAACCAAGTAACATTGTAGTCAAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGG 196
|||..||||.|||||.||.|||||.||.||||||||.||.||.|||||.|||||.||.||.||.||||||||||
Sbjct 444 TCATCGGGACTTAAAGCCTAGTAATATAGTAGTCAAATCAGACTGCACTTTGAAGATTCTTGATTTTGGACTGG 517
Query 197 CCAGGACAGCAGGCACAAGCTTCATGATGACTCCATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATC 270
|.|||||.|||||.||.||.||.||||||||.||.|||||||||||.||.||.||||||||.||.||||||||.
Sbjct 518 CGAGGACTGCAGGAACGAGTTTTATGATGACGCCTTATGTGGTGACTCGCTACTACAGAGCACCAGAGGTCATT 591
Query 271 CTGGGGATGGGCTACAAGGAGAACGTGGATATATGGTCTGTGGGATGCATTATGGGAGAAATGGTTCGCCACAA 344
||.||.|||||||||||||||||||||||..|||||||||||||.|||||||||||||||||||||.|||||||
Sbjct 592 CTCGGCATGGGCTACAAGGAGAACGTGGACTTATGGTCTGTGGGGTGCATTATGGGAGAAATGGTTTGCCACAA 665
Query 345 AATCCTCTTTCCAGGAAGGGACTATATTGACCAGTGGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAG 418
||||||||||||||||||||||||||||||.|||||||||||.||.||||||||.||.||||||||.|||||.|
Sbjct 666 AATCCTCTTTCCAGGAAGGGACTATATTGATCAGTGGAATAAAGTTATTGAACAGCTCGGAACACCTTGTCCTG 739
Query 419 AATTCATGAAGAAATTGCAACCCACAGTAAGAAACTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTC 492
||||||||||||||.|.|||||.||||||||.|..|||||.||.||..||||.||.||.||.|||...|.|||.
Sbjct 740 AATTCATGAAGAAACTACAACCAACAGTAAGGACTTATGTTGAAAACAGGCCTAAATACGCTGGATATAGCTTT 813
Query 493 CCCAAACTCTTCCCAGATTCCCTCTTCCCAGCGGACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGA 566
...|||||.|||||.|||...||.||||||||.|||||.|||||.||.|||||.||||||||.||.||.||.||
Sbjct 814 GAGAAACTGTTCCCCGATGTGCTTTTCCCAGCTGACTCAGAGCATAACAAACTTAAAGCCAGTCAGGCAAGAGA 887
Query 567 CTTGTTGTCAAAGATGCTAGTGATTGACCCAGCAAAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACA 640
.|||||.||.||.||||||||.||.||..||.|.|||||.||.||.||.||.||.||..|.|||||.||.||||
Sbjct 888 TTTGTTATCCAAAATGCTAGTAATAGATGCATCCAAAAGGATCTCCGTAGATGAAGCTCTCCAGCACCCATACA 961
Query 641 TCAACGTCTGGTATGACCCAGCCGAAGTGGAGGCGCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGA 714
||||||||||||||||.||..|.||||..||.||.||.|||||..||||....|||||||||||.|||||.||.
Sbjct 962 TCAACGTCTGGTATGATCCTTCAGAAGCAGAAGCCCCACCACCAAAGATCCCGGACAAGCAGTTAGATGAGAGG 1035
Query 715 GAACACACAATTGAAGAATGGAAAGAACTTATCTACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGG 788
||.||||||||.||.||.|||||||||||.||.||||||||.||||||.|||..||.|||...|||||.|||||
Sbjct 1036 GAGCACACAATAGAGGAGTGGAAAGAACTGATATACAAGGAGGTAATGGATTTGGAGGAACGAACTAAGAATGG 1109
Query 789 TGTAGTAAAAGGACAGCCTTCTCCTT-----CAGGTGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTC 857
.||..|||.|||.|||||.||||||| |||||||||||.
Sbjct 1110 AGTCATAAGAGGGCAGCCGTCTCCTTTAGCACAGGTGCAGCAA------------------------------- 1152
Query 858 GTCTGTCAATGACATCTCCTCCATGTCCACCGACCAGACCCTGGCATCTGACACTGACAGCAGCCTGGAAGCCT 931
Sbjct 1153 -------------------------------------------------------------------------- 1152
Query 932 CGGCAGGACCCCTGGGTTGTTGCAGG 957
Sbjct 1153 -------------------------- 1152