Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14811
Subject:
NM_001042557.2
Aligned Length:
1425
Identities:
1133
Gaps:
168

Alignment

Query    1  ATGGCGGCGTCCTCCCTGGAACAGAAGCTGTCCCGCCTGGAAGCAAAGCTAAAGCAGGAGAACCGGGAGGCCCG  74
            ||||||||||||||||||||.|||||||||||||||||||||||.|||||.||||||||||||||.||||||||
Sbjct    1  ATGGCGGCGTCCTCCCTGGAGCAGAAGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGAACCGTGAGGCCCG  74

Query   75  GCGGAGGATCGACCTCAACCTGGATATCAGCCCCCAGCGGCCCAGGCCCA------------------------  124
            ..|||||||||||||||||.|||||||||||||.||||||||||||||||                        
Sbjct   75  CAGGAGGATCGACCTCAACTTGGATATCAGCCCACAGCGGCCCAGGCCCATTATTGTGATCACTCTAAGCCCTG  148

Query  125  ------------------------CCCTGCAGCTCCCGCTGGCCAACGATGGGGGCAGCCGCTCGCCATCCTCA  174
                                    |||||||.|||||.||||||||||||||||||||||||||.|||||||||
Sbjct  149  CTCCTGCCCCGTCCCAGCGAGCAGCCCTGCAACTCCCACTGGCCAACGATGGGGGCAGCCGCTCACCATCCTCA  222

Query  175  GAGAGCTCCCCGCAGCACCCCACGCCCCCCGCCCGGCCCCGCCACATGCTGGGGCTCCCGTCAACCCTGTTCAC  248
            |||||||||||.||||||||.||.||||||.||||||||||||||||||||||||||||.||||||.|||||||
Sbjct  223  GAGAGCTCCCCACAGCACCCTACACCCCCCACCCGGCCCCGCCACATGCTGGGGCTCCCATCAACCTTGTTCAC  296

Query  249  ACCCCGCAGCATGGAGAGCATTGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCAGACGGGCTACCTGACCA  322
            |||.|||||.|||||||||||.||||||||||||||||||||||||||||||||||||||.||.||||||||.|
Sbjct  297  ACCGCGCAGTATGGAGAGCATCGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCAGACAGGGTACCTGACTA  370

Query  323  TCGGGGGCCAGCGCTACCAGGCAGAAATCAACGACCTGGAGAACTTGGGCGAGATGGGCAGCGGCACCTGCGGC  396
            |||||||||||||.||.||||||||||||||.|||.|||||||||||||.|||||||||||.||.|||||.||.
Sbjct  371  TCGGGGGCCAGCGTTATCAGGCAGAAATCAATGACTTGGAGAACTTGGGTGAGATGGGCAGTGGTACCTGTGGT  444

Query  397  CAGGTGTGGAAGATGCGCTTCCGGAAGACCGGCCACGTCATTGCCGTTAAGCAAATGCGGCGCTCCGGGAACAA  470
            |||||||||||||||||.|||||||||||.||||||.|||||||.||||||||||||||||||||.||||||||
Sbjct  445  CAGGTGTGGAAGATGCGGTTCCGGAAGACAGGCCACATCATTGCTGTTAAGCAAATGCGGCGCTCTGGGAACAA  518

Query  471  GGAGGAGAACAAGCGCATCCTCATGGACCTGGATGTGGTGCTGAAGAGCCACGACTGCCCCTACATCGTGCAGT  544
            |||.|||||.||||||||..|.||||||||||||||.||.||.||||||||.||||||||.||||||||.||||
Sbjct  519  GGAAGAGAATAAGCGCATTTTGATGGACCTGGATGTAGTACTCAAGAGCCATGACTGCCCTTACATCGTTCAGT  592

Query  545  GCTTTGGGACGTTCATCACCAACACGGATGTCTTCATCGCCATGGAGCTCATGGGCACCTGCGCTGAGAAGCTC  618
            |||||||.||.||||||||||||||.||.|||||.||.||||||||||||||||||||.||.||.||||||||.
Sbjct  593  GCTTTGGCACCTTCATCACCAACACAGACGTCTTTATTGCCATGGAGCTCATGGGCACATGTGCAGAGAAGCTG  666

Query  619  AAGAAGCGGATGCAGGGCCCCATCCCCGAGCGCATTCTGGGCAAGATGACAGTGGCGATTGTGAAGGCGCTGTA  692
            |||||.||.||||||||||||||.||.|||||.||.||||||||||||||.||||||||||||||.||.|||||
Sbjct  667  AAGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGATTGTGAAAGCACTGTA  740

Query  693  CTACCTGAAGGAGAAGCACGGTGTCATCCACCGCGACGTCAAGCCCTCCAACATCCTGCTGGACGAGCGGGGCC  766
            |||.||||||||||||||.||.||||||||.|||||.|||||.|||||||||||||||||.||.||||||||||
Sbjct  741  CTATCTGAAGGAGAAGCATGGCGTCATCCATCGCGATGTCAAACCCTCCAACATCCTGCTAGATGAGCGGGGCC  814

Query  767  AGATCAAGCTCTGCGACTTCGGCATCAGCGGCCGCCTGGTGGACTCCAAAGCCAAGACGCGGAGCGCCGGCTGT  840
            |||||||||||||.|||||.||||||||.||||||||.||.||||||||||||||.||.|||||.||.||||||
Sbjct  815  AGATCAAGCTCTGTGACTTTGGCATCAGTGGCCGCCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTGGCTGT  888

Query  841  GCCGCCTACATGGCACCCGAGCGCATTGACCCCCCAGACCCCACCAAGCCGGACTATGACATCCGGGCCGACGT  914
            ||.|||||.|||||.|||||||||||.|||||.|||||.|||||||||||.||||||||||||||.||.||.||
Sbjct  889  GCTGCCTATATGGCTCCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCTGACTATGACATCCGAGCTGATGT  962

Query  915  ATGGAGCCTGGGCATCTCGTTGCCCTGCCCGTCTCCCTCCCAGGTGGAGCTGGCAACAGGACAGTTTCCCTACA  988
            .||||||||||||||                     |||.|.||||||||||||||||||||||||.|||||.|
Sbjct  963  GTGGAGCCTGGGCAT---------------------CTCACTGGTGGAGCTGGCAACAGGACAGTTCCCCTATA  1015

Query  989  AGAACTGCAAGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGAGCCCCCGCTTCTGCCCGGACACATG  1062
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||.||.||||||
Sbjct 1016  AGAACTGCAAGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGAGCCCCCACTCCTGCCTGGTCACATG  1089

Query 1063  GGCTTCTCGGGGGACTTCCAGTCCTTCGTCAAAGACTGCCTTACTAAAGATCACAGGAAGAGACCAAAGTATAA  1136
            ||||||||.||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090  GGCTTCTCAGGGGACTTCCAGTCATTTGTCAAAGACTGCCTTACTAAAGATCACAGGAAGAGACCAAAGTATAA  1163

Query 1137  TAAGCTACTTGAACACAGCTTCATCAAGCGCTACGAGACGCTGGAGGTGGACGTGGCGTCCTGGTTCAAGGATG  1210
            |||||||||||||||||||||||||||||.|||.||||..||.||||||||.||.|||||||||||.|||||||
Sbjct 1164  TAAGCTACTTGAACACAGCTTCATCAAGCACTATGAGATACTCGAGGTGGATGTCGCGTCCTGGTTTAAGGATG  1237

Query 1211  TCATGGCGAAGACTGAGTCACCGCGGACTAGCGGCGTCCTGAGCCAGCCCCACCTGCCCTTCTTCAGG------  1278
            |||||||||||||.|||||.||..|||||||.||.||||||||.||||.|||.||||||||||||||.      
Sbjct 1238  TCATGGCGAAGACCGAGTCCCCAAGGACTAGTGGAGTCCTGAGTCAGCACCATCTGCCCTTCTTCAGTGGGAGT  1311

Query 1279  --------------------------------------------------------------------------  1278
                                                                                      
Sbjct 1312  CTGGAGGAGTCTCCCACTTCCCCACCTTCTCCCAAGTCCTTCCCTCTGTCACCAGCCATCCCTCAGGCCCAGGC  1385

Query 1279  -------------------  1278
                               
Sbjct 1386  AGAGTGGGTCTCGGGCAGG  1404

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