Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14833
- Subject:
- XM_017314791.1
- Aligned Length:
- 1365
- Identities:
- 756
- Gaps:
- 528
Alignment
Query 1 ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGC 74
||||||||||||.|||||||||||||||||||||.|||.||.|||||||||.||||||||||||||||||||||
Sbjct 1 ATGAGGCGACGACGGAGGCGGGACGGCTTTTACCTAGCGCCTGACTTCCGACACAGGGAAGCTGAGGACATGGC 74
Query 75 AGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT 148
|||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||||||||||
Sbjct 75 AGGAGTGTTTGACATAGACCTGGACCAGCCAGAAGATGCAGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT 148
Query 149 TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC 222
Query 223 TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA 296
Query 297 AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGG 370
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 297 AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAGATATTTGCCATGAAGG 370
Query 371 TGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAG 444
||||||||||||||||||||||.||.||||||||.||.||.||.||.||.||||||||.|||||.|||||||||
Sbjct 371 TGCTTAAAAAGGCAATGATAGTGAGGAATGCTAAGGACACGGCCCACACGAAAGCAGAGCGGAACATTCTGGAG 444
Query 445 GAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGA 518
|||||.||.||.||.|||||.|||||..|.|||||||||||||||||.||.|||||.||||||||||||||.||
Sbjct 445 GAAGTGAAACACCCTTTCATTGTGGACCTGATTTATGCCTTTCAGACCGGAGGAAAGCTCTACCTCATCCTCGA 518
Query 519 GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTT 592
|||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|
Sbjct 519 GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTCATGGAAGACACAG--------- 583
Query 593 ACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATC-ATCTACAGAGACCTGAAGCCGGA 665
|.||||.|||| |.|||.| .|||.|| |.|.|
Sbjct 584 ----------------CGTGGCCTTGG----------------GTGGACCGCTCTTCA-----------CTGCA 614
Query 666 GAATATCATGCTTAATCACCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAATCTATTCATGATG 739
||||.||.| |||| ||||.||.| ||||
Sbjct 615 GAATTTCCT--------------------TGAA-----------TTGGCCTTT--------TCTA--------- 640
Query 740 GAACAGTCACACACA-----CATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAGAAGTGGCC 808
|||||.| ||||| ||.|| ||| |...||| ||||||.||
Sbjct 641 --------ACACAGAAGCTGCATTT--------AAGAG-----------CCT----TAGGGAT--GAAGTGCCC 681
Query 809 ACAATCGTGCTGTGGATTGGTGGAG--TTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACCCCCATTCA 880
||.| ||||.|||| |.|..|||| |.|| ||||| .
Sbjct 682 ---------CTTT---TTGGAGGAGGCTCTCTGAGC------------CCTG-----TGGAG-----------G 715
Query 881 CTGGGGAGAATAGAAAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACCTCACACAA 954
|||.|| ||
Sbjct 716 CTGTGG---------------------------TC--------------------------------------- 723
Query 955 GAAGCCAGAGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTGGGGACGC 1028
||||| ||||| ||||| ||||.|| .||||| |
Sbjct 724 ------------CTGCT-----AGCTG-TGAAA-------CTGCCTC-------------AGTCCT-------C 752
Query 1029 TGGAGAAGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGTGGAGCCCC 1102
|.| |||||| |||.
Sbjct 753 TAG--------------------------GACACA-----------------------------------CCCT 765
Query 1103 CCTTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTGATTCCAA----GTTTACACGTCAGACACC 1172
||.| .|||..|.||||||.|| ||||.||| | ||||
Sbjct 766 CCAT------CCTGGAGTAATCTGCAG-----------------GATTGCAACATTG-TTAC------------ 803
Query 1173 TGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTGGCTC 1246
||||| |||| |.|| |||..||||.||..||| .|..||
Sbjct 804 -----ACAGC-----------------CAGT---ATTG-----CAGTGCTTTGTGCTTTT--------CGAATC 839
Query 1247 CATCTGTACTTGAAAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTATTGGC 1320
|| ||.||.||
Sbjct 840 CA---------GACAGGGT------------------------------------------------------- 849
Query 1321 AGCCCACGAACACCTGTCAGTACTGCTATGTGC 1353
Sbjct 850 --------------------------------- 849