Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14833
• Subject: XM_017314792.1
• Aligned Length: 1369
• Identities: 644
• Gaps: 668

Alignment

Query    1  ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGC  74
            ||||||||||||.|||||||||||||||||||||.|||.||.|||||||||.||||||||||||||||||||||
Sbjct    1  ATGAGGCGACGACGGAGGCGGGACGGCTTTTACCTAGCGCCTGACTTCCGACACAGGGAAGCTGAGGACATGGC  74

Query   75  AGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT  148
            |||||||||||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||||||||||
Sbjct   75  AGGAGTGTTTGACATAGACCTGGACCAGCCAGAAGATGCAGGCTCTGAGGATGAGCTGGAGGAGGGGGGTCAGT  148

Query  149  TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAATTTGAAATC  222

Query  223  TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCAGAAACTAGTGTGAACAGAGGGCCAGAAAAAATCAGACCAGAATGTTTTGAGCTACTTCGGGTACTTGGTAA  296

Query  297  AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAAATATTTGCCATGAAGG  370
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  297  AGGGGGCTATGGAAAGGTTTTTCAAGTACGAAAAGTAACAGGAGCAAATACTGGGAAGATATTTGCCATGAAGG  370

Query  371  TGCTTAAAAAGGCAATGATAGTAAGAAATGCTAAAGATACAGCTCATACAAAAGCAGAACGGAATATTCTGGAG  444
            ||||||||||||||||||||||.||.||||||||.||.||.||.||.||.||||||||.|||||.|||||||||
Sbjct  371  TGCTTAAAAAGGCAATGATAGTGAGGAATGCTAAGGACACGGCCCACACGAAAGCAGAGCGGAACATTCTGGAG  444

Query  445  GAAGTAAAGCATCCCTTCATCGTGGATTTAATTTATGCCTTTCAGACTGGTGGAAAACTCTACCTCATCCTTGA  518
            |||||.||.||.||.|||||.|||||..|.|||||||||||||||||.||.|||||.||||||||||||||.||
Sbjct  445  GAAGTGAAACACCCTTTCATTGTGGACCTGATTTATGCCTTTCAGACCGGAGGAAAGCTCTACCTCATCCTCGA  518

Query  519  GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTTATGGAAGACACTGCCTGCTTTT  592
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|         
Sbjct  519  GTATCTCAGTGGAGGAGAACTATTTATGCAGTTAGAAAGAGAGGGAATATTCATGGAAGACACAG---------  583

Query  593  ACTTGGCAGAAATCTCCATGGCTTTGGGGCATTTACATCAAAAGGGGATC-ATCTACAGAGACCTGAAGCCGGA  665
                            |.||||.||||                |.|||.| .|||.||           |.|.|
Sbjct  584  ----------------CGTGGCCTTGG----------------GTGGACCGCTCTTCA-----------CTGCA  614

Query  666  GAATATCATGCTT-AAT--------CA----CCAAGGTCATGTGAAACTAACAGACTTTGGACTATGCAAAGAA  726
            ||||.||   ||| |||        ||    ||||||.|.|.|    ||||                ||.||||
Sbjct  615  GAATTTC---CTTGAATTGACTTTCCAGTTCCCAAGGCCTTTT----CTAA----------------CACAGAA  665

Query  727  TCTATTCATGATGGAACAGTCACACACACATTTTGTGGAACAATAGAATACATGGCCCCTGAAATCTTGATGAG  800
            .||                        .|||||        ||.||           |||    |...|||  |
Sbjct  666  GCT------------------------GCATTT--------AAGAG-----------CCT----TAGGGAT--G  690

Query  801  AAGTGGCCACAATCGTGCTGTGGATTGGTGGAG--TTTGGGAGCATTAATGTATGACATGCTGACTGGAGCACC  872
            |||||.||         ||.|   ||||.||||  |.|.                                   
Sbjct  691  AAGTGCCC---------CTTT---TTGGAGGAGGCTCTC-----------------------------------  717

Query  873  CCCATTCACTGGGGAGAATAGAAAGAAAACAATTGACAAAATCCTCAAATGTAAACTCAATTTGCCTCCCTACC  946
                                                                                      
Sbjct  718  --------------------------------------------------------------------------  717

Query  947  TCACACAAGAAGCCAGAGATCTGCTTAAAAAGCTGCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCT  1020
                                                                                      
Sbjct  718  --------------------------------------------------------------------------  717

Query 1021  GGGGACGCTGGAGAAGTTCAAGCTCATCCATTCTTTAGACACATTAACTGGGAAGAACTTCTGGCTCGAAAGGT  1094
                                                                                      
Sbjct  718  --------------------------------------------------------------------------  717

Query 1095  GGAGCCCCCCTTTAAACCTCTGTTGCAATCTGAAGAGGATGTAAGTCAGTTTGATTCCAAGTTTACACGTCAGA  1168
                                                                                      
Sbjct  718  --------------------------------------------------------------------------  717

Query 1169  CACCTGTCGACAGCCCAGATGACTCAACTCTCAGTGAAAGTGCCAATCAGGTCTTTCTGGGTTTTACATATGTG  1242
                                                                                      
Sbjct  718  --------------------------------------------------------------------------  717

Query 1243  GCTCCATCTGTACTTGAAAGTGTGAAAGAAAAGTTTTCCTTTGAACCAAAAATCCGATCACCTCGAAGATTTAT  1316
                                                                                      
Sbjct  718  --------------------------------------------------------------------------  717

Query 1317  TGGCAGCCCACGAACACCTGTCAGTACTGCTATGTGC  1353
                                                 
Sbjct  718  -------------------------------------  717