Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14983
Subject:
XM_006726278.2
Aligned Length:
1977
Identities:
1467
Gaps:
288

Alignment

Query    1  ATGACCCTCACCCTCTCAGTCCTGATTTGCCTCGGGCTGAGTGTGGGCCCCAGGACCTGCGTGCAGGCAGGCAC  74
            |||||.|.|.|||||.|||.||||.|.|||||.|||||||||.||||||||||||||.||.||||||||||..|
Sbjct    1  ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCATGCAGGCAGGGCC  74

Query   75  CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGCCTCTGTGAT-AGCTCGGGGGAAGCCCGTGACCCTCTGGTGT  147
            |.||||||||||||||||||||||||||||||.||||||||| |||| ||||||..|||||||||.||||||||
Sbjct   75  CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCT-GGGGGAGCCCCGTGACCATCTGGTGT  147

Query  148  CAGGGGCCCCTGGAGACTGAGGAGTACCGTCTGGATAAGGAGGGACTCCCATGGGCCC-GGAAGAGACAGAACC  220
            ||.|||..|||||||.|..|||||||||..||||||||.||||||..|||| |.|||| ||.|.|||.|.||||
Sbjct  148  CAAGGGAGCCTGGAGGCCCAGGAGTACCAACTGGATAAAGAGGGAAGCCCA-GAGCCCTGGGACAGAAATAACC  220

Query  221  CACTGGAGCCTGGAGC-----CAAGGCCAAGTTCCACATTCCATCCACGGTGTATGACA-------GTGCAGGG  282
            |||||||.||     |     ||||||||..|||..|||.||||||       ||||||       .|||||||
Sbjct  221  CACTGGAACC-----CAAGAACAAGGCCAGATTCTCCATCCCATCC-------ATGACACAGCACCATGCAGGG  282

Query  283  CGATACCGCTGCTACTATGAGACCCCTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGCGACAGG  356
            .|||||||||||.|||||.|.|.|.||||||||||||||||||||||.||||||||||||||||||..||||||
Sbjct  283  AGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGG  356

Query  357  ATTCTATGCA--GAACCCACTCTTTTAGCCCTGCCGAGTCCTGTGGTGGCCTCAGGAGGAAATGTGACCCTCCA  428
            ||||||  ||  .|||||||.||.|.|||||||||.||.|||||||||||||||||.||.|||.|||||||||.
Sbjct  357  ATTCTA--CAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCG  428

Query  429  GTGTGATACACTGGACGGACTTCTCAC--GTTTGTTCTTGTTG-AGGA---AGAACAGAAGCTCCCCAGGACCC  496
            .||||...|||.|.|.|||  |.||||  .||||||| ||.|| ||||   ||||||..||||||||.||||||
Sbjct  429  ATGTGGCTCACAGAAGGGA--TATCACCATTTTGTTC-TGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCC  499

Query  497  TGTACTCACAGAAGCTCCCCAAAGGGCCATCCCAGGCCCTGTTCCCTGTGGGTCCCGTGACCCCCAGCTGCAGG  570
            ||.||||||||.||||||.||..|||...|.|||||||||||||||||||||.|||||||||||||||..||||
Sbjct  500  TGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGG  573

Query  571  TGGAGGTTCAGATGCTATTACTATTACAGGAAAAACCCTC-AGGTGTGGTCGAACCCCAGTGACCTCCTGGAGA  643
            ||||||||||.|||||||||||||||.| .|||.||||.| .|||||||||..||||||||||||.||||||||
Sbjct  574  TGGAGGTTCACATGCTATTACTATTATA-CAAACACCCCCTGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGA  646

Query  644  TTCTGGTCCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGATCCCGCAGGGCTCTGTCGTGGCCCGCGGAGGC--A  715
            |||||..|.||||||||||||||||||||||||||||||.||.|||||||.|||||.||||||..|  |||  |
Sbjct  647  TTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTG--GGCAGA  718

Query  716  GCCTGACCCTGCAGTGTCGCTCTGATGTCGGCTATGACATATTCGTTCTGTACAAGGAGGGGGAACATGACCTC  789
            ||||||||||.||||||.||||||||||||||||.||||.|||.||||||||.|||||||||||||.||||.||
Sbjct  719  GCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTC  792

Query  790  GTCCAGGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTC  863
            .|||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  793  CTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTC  866

Query  864  CCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCC-CCTAGGTGGTCGGCCCCCAGCGACCCCCTG  936
            |.||||||||||||||||.|||||.|||||||||||||||||| ||.| |||||||||||||||.|||||||||
Sbjct  867  CTACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGA-GTGGTCGGCCCCCAGTGACCCCCTG  939

Query  937  GCCATCCTGATCGCAGGACTGATCCCTGACATACCCG---CCCTCTCGGTGCAGCCGGGCCCCAAGGTGGCCTC  1007
            |.||||||||||.||||||.||||..|||||   |||   ||||.||.|..|||||||||||||..||||||||
Sbjct  940  GACATCCTGATCACAGGACAGATCTATGACA---CCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTC  1010

Query 1008  AGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGCATCAGATA----GACACTTTCTTTTTGACCAAGGAGGGG  1077
            |||||||||||||||||||||||||||||||.||    .|.||    |||||||||.||.|||||||.||.|||
Sbjct 1011  AGGAGAGAACGTGACCCTGCTGTGTCAGTCACGG----GGGTATTTTGACACTTTCCTTCTGACCAAAGAAGGG  1080

Query 1078  GCAGCCCATCCCCCGCTGTGTCTAAAGTCAAAGTAC-CAGTCTTATAGACACCAGGCTGAATTCTCCATGAGTC  1150
            ||||||||||||||.|||.||||.|..||||.|||| .|| ||.|||...||||||||||||||.|||||||||
Sbjct 1081  GCAGCCCATCCCCCACTGCGTCTGAGATCAATGTACGGAG-CTCATAAGTACCAGGCTGAATTCCCCATGAGTC  1153

Query 1151  CTGTGACCTCAGCCCAGGGTGGAACCTACCGATGCTACAGCGCAATCAGGTCCTACCCCTACCTGCTGTCCAGC  1224
            ||||||||||||||||.|..||.||||||.|.||||||.||.||..|||.|||.|||||.||||||||||...|
Sbjct 1154  CTGTGACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCACGCAGCTCCAACCCCCACCTGCTGTCTTTC  1227

Query 1225  CCTAGTTACCCCCAGGAGCTCGTGGTCTCAGGACCCTCTGG-GGATCCCAGCCTCTCACCTACAGGCTCCACCC  1297
            ||.|||.|.||||.|||.|||.||||||||||||.|||||| ||.| ||||||||.||||.||||| .||.|||
Sbjct 1228  CCCAGTGAGCCCCTGGAACTCATGGTCTCAGGACACTCTGGAGGCT-CCAGCCTCCCACCCACAGG-GCCGCCC  1299

Query 1298  -CCACACCTGGCCCTGAGGACCAGCCCCTCACCCCCACGGGGTTGGATCCCCAGAGTGGTCTGGGAAGGCACCT  1370
             |||||||                                                ||||||||||||..||||
Sbjct 1300  TCCACACC------------------------------------------------TGGTCTGGGAAGATACCT  1325

Query 1371  GGGGGTTGTGACTGGGGTCTCAGTGGCCTTCGTCCTGCTGCTGTTCCTCCTCCTCTTCCTCCTCCTCCGACATC  1444
            ||.||||.|||.|||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||.||
Sbjct 1326  GGAGGTTTTGATTGGGGTCTCGGTGGCCTTCGTCCTGCTGCTCTTCCTCCTCCTCTTCCTCCTCCTCCGACGTC  1399

Query 1445  GGCATCAGAGCAAACACAGGACATCGGCCC------------ATTTCTACCGTCCTGCAGGGGCTGCGGGGCCA  1506
            .||.|||.|||||||||||||||||.|.||            |||||.|.|||||||||||||||||||.|.||
Sbjct 1400  AGCGTCACAGCAAACACAGGACATCTGACCAGAGAAAGACTGATTTCCAGCGTCCTGCAGGGGCTGCGGAGACA  1473

Query 1507  GAGCCCAAGGACCAGGGCCTGCAGAAGAGGGCCAGCCCAGTTGCTGACATCCAGGAGGAAATTCTCAATGCTGC  1580
            ||||||||||||..||||||||.||.||||.|||||||||.|||||||.|||||||.||||..|||.|||||||
Sbjct 1474  GAGCCCAAGGACAGGGGCCTGCTGAGGAGGTCCAGCCCAGCTGCTGACGTCCAGGAAGAAAACCTCTATGCTGC  1547

Query 1581  CGTGAAGGACACACAGCCCAAGGACGGGGTGG------------------------------------------  1612
            .|||||||||||||||.|..|||||.||||||                                          
Sbjct 1548  TGTGAAGGACACACAGTCTGAGGACAGGGTGGAGCTGGACAGTCAGCAGAGCCCACACGATGAAGACCCCCAGG  1621

Query 1613  --------------------------------------------------------------------------  1612
                                                                                      
Sbjct 1622  CAGTGACGTATGCCCCGGTGAAACACTCCAGTCCTAGGAGAGAAATGGCCTCTCCTCCCTCCTCACTGTCTGGG  1695

Query 1613  -------------------------------------------AGATGGATGCTCGGGCTGCTGCATCTGAAGC  1643
                                                       |||||||..||..||||||||||||||||||
Sbjct 1696  GAATTCCTGGACACAAAGGACAGACAGGTGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGC  1769

Query 1644  CCCCCAGGATGTGACCTACGCCCAGCTACACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCC  1717
            |.|||||||||||||||||||||||||.||||||||||||||.||||||.||||||||||||||||||||||||
Sbjct 1770  CTCCCAGGATGTGACCTACGCCCAGCTGCACAGCTTGACCCTTAGACGGAAGGCAACTGAGCCTCCTCCATCCC  1843

Query 1718  AGGAAAGGGAACCTCCAGCTGAACCCAGCATCTACGCCCCCCTGGCCATCCAC  1770
            |||||.||||||||||||||||.|||||||||||||||.|.||||||||||||
Sbjct 1844  AGGAAGGGGAACCTCCAGCTGAGCCCAGCATCTACGCCACTCTGGCCATCCAC  1896

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