Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14983
- Subject:
- XM_011547130.2
- Aligned Length:
- 1812
- Identities:
- 1157
- Gaps:
- 462
Alignment
Query 1 ATGACCCTCACCCTCTCAGTCCTGATTTGCCTCGGGCTGAGTGTGGGCCCCAGGACCTGCGTGCAGGCAGGCAC 74
|||||.|.|.|||||.|||.||||.|.|||||.|||||||||.||||||||||||||.|||||||||||||..|
Sbjct 1 ATGACGCCCGCCCTCACAGCCCTGCTCTGCCTTGGGCTGAGTCTGGGCCCCAGGACCCGCGTGCAGGCAGGGCC 74
Query 75 CCTCCCCAAACCCACCCTCTGGGCTGAGCCAGCCTCTGTGAT-AGCTCGGGGGAAGCCCGTGACCCTCTGGTGT 147
|.||||||||||||||||||||||||||||||.||||||||| |||| ||||||..|||||||||.||||||||
Sbjct 75 CTTCCCCAAACCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCAGCT-GGGGGAGCCCCGTGACCATCTGGTGT 147
Query 148 CAGGGGCCCCTGGAGACTGAGGAGTACCGTCTGGATAAGGAGGGACTCCCATGGGCCC-GGAAGAGACAGAACC 220
||||||..|||||||.|..|||||||||..||||||||.||||||..|||| |.|||| ||.|.|||.|.||||
Sbjct 148 CAGGGGAGCCTGGAGGCCCAGGAGTACCAACTGGATAAAGAGGGAAGCCCA-GAGCCCTGGGACAGAAATAACC 220
Query 221 CACTGGAGCCTGGAGC-----CAAGGCCAAGTTCCACATTCCATCCACGGTGTATGACA-------GTGCAGGG 282
|||||||.|| | ||||||||..|||..|||.|||||| |||||| .|||||||
Sbjct 221 CACTGGAACC-----CAAGAACAAGGCCAGATTCTCCATCCCATCC-------ATGACACAGCACCATGCAGGG 282
Query 283 CGATACCGCTGCTACTATGAGACCCCTGCAGGCTGGTCAGAGCCCAGTGACCCCCTGGAGCTGGTGGCGACAGG 356
.|||||||||||.|||||.|.|.|.||||||||||||||||||||||.||||||||||||||||||..||||||
Sbjct 283 AGATACCGCTGCCACTATTACAGCTCTGCAGGCTGGTCAGAGCCCAGCGACCCCCTGGAGCTGGTGATGACAGG 356
Query 357 ATTCTATGCA--GAACCCACTCTTTTAGCCCTGCCGAGTCCTGTGGTGGCCTCAGGAGGAAATGTGACCCTCCA 428
|||||| || .|||||||.||.|.|||||||||.||.|||||||||||||||||.||.|||.|||||||||.
Sbjct 357 ATTCTA--CAACAAACCCACCCTCTCAGCCCTGCCCAGCCCTGTGGTGGCCTCAGGGGGGAATATGACCCTCCG 428
Query 429 GTGTGATACACTGGACGGACTTCTCAC--GTTTGTTCTTGTTG-AGGA---AGAACAGAAGCTCCCCAGGACCC 496
.||||...|||.|.|.||| |.|||| .||||||| ||.|| |||| ||||||..||||||||.||||||
Sbjct 429 ATGTGGCTCACAGAAGGGA--TATCACCATTTTGTTC-TGATGAAGGAAGGAGAACACCAGCTCCCCCGGACCC 499
Query 497 TGTACTCACAGAAGCTCCCCAAAGGGCCATCCCAGGCCCTGTTCCCTGTGGGTCCCGTGACCCCCAGCTGCAGG 570
||.||||||||.||||||.||..|||...|.|||||||||||||||||||||.|||||||||||||||..||||
Sbjct 500 TGGACTCACAGCAGCTCCACAGTGGGGGGTTCCAGGCCCTGTTCCCTGTGGGCCCCGTGACCCCCAGCCACAGG 573
Query 571 TGGAGGTTCAGATGCTATTACTATTACAGGAAAAACCCTC-AGGTGTGGTCGAACCCCAGTGACCTCCTGGAGA 643
||||||||||.|||||||||||||||.| .|||.||||.| .|||||||||..||||||||||||.||||||||
Sbjct 574 TGGAGGTTCACATGCTATTACTATTATA-CAAACACCCCCTGGGTGTGGTCCCACCCCAGTGACCCCCTGGAGA 646
Query 644 TTCTGGTCCCAGGCGTGTCTAGGAAGCCCTCCCTCCTGATCCCGCAGGGCTCTGTCGTGGCCCGCGGAGGC--A 715
|||||..|.||||||||||||||||||||||||||||||.||.|||||||.|||||.||||||..| ||| |
Sbjct 647 TTCTGCCCTCAGGCGTGTCTAGGAAGCCCTCCCTCCTGACCCTGCAGGGCCCTGTCCTGGCCCCTG--GGCAGA 718
Query 716 GCCTGACCCTGCAGTGTCGCTCTGATGTCGGCTATGACATATTCGTTCTGTACAAGGAGGGGGAACATGACCTC 789
||||||||||.||||||.||||||||||||||||.||||.|||.||||||||.|||||||||||||.||||.||
Sbjct 719 GCCTGACCCTCCAGTGTGGCTCTGATGTCGGCTACGACAGATTTGTTCTGTATAAGGAGGGGGAACGTGACTTC 792
Query 790 GTCCAGGGCTCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTC 863
.|||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 793 CTCCAGCGCCCTGGCCAGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCCCTC 866
Query 864 CCACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCC-CCTAGGTGGTCGGCCCCCAGCGACCCCCTG 936
||||||||||||||||||.|||||.|||||||||||||||||| ||.| |||||||||||||||||||||||||
Sbjct 867 CCACGGGGGCCAGTACAGGTGCTATGGTGCACACAACCTCTCCTCCGA-GTGGTCGGCCCCCAGCGACCCCCTG 939
Query 937 GCCATCCTGATCGCAGGACTGATCCCTGACATACCCG---CCCTCTCGGTGCAGCCGGGCCCCAAGGTGGCCTC 1007
..|||||||||.|||||||.||||..||||| ||| ||||.||.|..|||||||||||||..||||||||
Sbjct 940 AACATCCTGATGGCAGGACAGATCTATGACA---CCGTCTCCCTGTCAGCACAGCCGGGCCCCACAGTGGCCTC 1010
Query 1008 AGGAGAGAACGTGACCCTGCTGTGTCAGTCATGGCATCAGATAGACACTTTCTTTTTGACCAAGGAGGGGGCAG 1081
|||||||||||||||||||||||||||||||.||..|.|..|.|||||||||.||.|||||||.||.|||||||
Sbjct 1011 AGGAGAGAACGTGACCCTGCTGTGTCAGTCACGGGGTTATTTTGACACTTTCCTTCTGACCAAAGAAGGGGCAG 1084
Query 1082 CCCATCCCCCGCTGTGTCTAAAGTCAAAGTAC-CAGTCTTATAGACACCAGGCTGAATTCTCCATGAGTCCTGT 1154
||||||||||.|||.||||.|..||||.|||| .|| ||.|||...||||||||||||||.|||||||||||||
Sbjct 1085 CCCATCCCCCACTGCGTCTGAGATCAATGTACGGAG-CTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGT 1157
Query 1155 GACCTCAGCCCAGGGTGGAACCTACCGATGCTACAGCGCAATCAGGTCCTACCCCTACCTGCTGTC-CAGCCCT 1227
||||||||||||.|..||.||||||.|.||||||.||.||..|||.|||.|||||.|||||||||| || |||.
Sbjct 1158 GACCTCAGCCCACGCGGGGACCTACAGGTGCTACGGCTCACGCAGCTCCAACCCCCACCTGCTGTCTCA-CCCC 1230
Query 1228 AGTTACCCCCAGGAGCTCGTGGTCTCAGGACCCTCTGGGGATCCCAGCCTCTCAC-CTACAGGCTCCACCCCCA 1300
|||.|.||||.|||||||.|||||| |||||||.||| |.| |||.| .|
Sbjct 1231 AGTGAGCCCCTGGAGCTCATGGTCT-------------------CAGCCTCACACGCCA-AGGAT-------TA 1277
Query 1301 CAC-CTGGCCCTGAGGACCAGCCCCTCACCCCCACGGGGTTGGATCCCCAGAGTGGTCTGGG-AAGGCACCTGG 1372
||| .||| ||...||||.||.|| |||| |.||||
Sbjct 1278 CACAGTGG-----------AGAATCTCATCCGCA------------------------TGGGCATGGCA----- 1311
Query 1373 GGGTTGTGACTGGGGTCTCAGTGGCCTTCGTCCTGCTGCTGTTCCTC---CTCCTCTTCCTCCTCCTCCGACAT 1443
|.|||.||| |||.|||||||| .|.||.||
Sbjct 1312 -----------------------GGCTTGGTC---CTGGTGTTCCTCGGGATTCTGTT---------------- 1343
Query 1444 CGGCATCAGAGCAAACACAGGACATCGGCCCATTTCTACCGTCCTGCAGGGGCTGCGGGGCCAGAG-----CCC 1512
||..||| .|.|||.||| ||||||| |||
Sbjct 1344 ----ATTTGAG---GCTCAGCACA-----------------------------------GCCAGAGAAACCCCC 1375
Query 1513 AAGGACCAGGGCCTGCAGAAGAGGGCCAGCCCAGTTGCTGACATCCAGGAGGAAATTCTCAATGCTGCCGTGAA 1586
||| .||||| ||.|||||
Sbjct 1376 AAG---------ATGCAG--------------------------CCGGGAGG---------------------- 1392
Query 1587 GGACACACAGCCCAAGGACGGGGTGGAGATGGATGCTCGGGCTGCTGCATCTGAAGCCCCCCAGGATGTGACCT 1660
Sbjct 1393 -------------------------------------------------------------------------- 1392
Query 1661 ACGCCCAGCTACACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAAGGGAACCTCCA 1734
Sbjct 1393 -------------------------------------------------------------------------- 1392
Query 1735 GCTGAACCCAGCATCTACGCCCCCCTGGCCATCCAC 1770
Sbjct 1393 ------------------------------------ 1392
