Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15036
- Subject:
- NM_014572.3
- Aligned Length:
- 3272
- Identities:
- 1511
- Gaps:
- 1751
Alignment
Query 1 ATGAGGCCAAAGACTTTTCCTGCCACGACTTATTCTGGAAATAGCCGGCAGCGACTGCAAGAGATTCGTGAGGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGGCCAAAGACTTTTCCTGCCACGACTTATTCTGGAAATAGCCGGCAGCGACTGCAAGAGATTCGTGAGGG 74
Query 75 GTTAAAGCAGCCATCCAAGTCTTCGGTTCAGGGGCTACCCGCAGGACCAAACAGTGACACTTCCCTGGATGCCA 148
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTTAAAACAGCCATCCAAGTCTTCGGTTCAGGGGCTACCCGCAGGACCAAACAGTGACACTTCCCTGGATGCCA 148
Query 149 AAGTCCTGGGGAGCAAAGATGCCACCAGGCAGCAGCAGCAGATGAGAGCCACCCCAAAGTTCGGACCTTATCAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAGTCCTGGGGAGCAAAGATGCCACCAGGCAGCAGCAGCAGATGAGAGCCACCCCAAAGTTCGGACCTTATCAG 222
Query 223 AAAGCCTTGAGGGAAATCAGATATTCCTTGTTGCCTTTTGCTAATGAATCGGGCACCTCTGCAGCTGCAGAAGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAAGCCTTGAGGGAAATCAGATATTCCTTGTTGCCTTTTGCTAATGAATCGGGCACCTCTGCAGCTGCAGAAGT 296
Query 297 GAACCGGCAAATGCTGCAGGAACTGGTGAACGCAGGATGCGACCAGGAGATGGCTGGCCGAGCTCTCAAGCAGA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAACCGGCAAATGCTGCAGGAACTGGTGAACGCAGGATGCGACCAGGAGATGGCTGGCCGAGCTCTCAAGCAGA 370
Query 371 CTGGCAGCAGGAGCATCGAGGCCGCCCTGGAGTACATCAGCAAGATGGGCTACCTGGACCCGAGGAATGAGCAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CTGGCAGCAGGAGCATCGAGGCCGCCCTGGAGTACATCAGCAAGATGGGCTACCTGGACCCGAGGAATGAGCAG 444
Query 445 ATTGTGCGGGTCATTAAGCAGACCTCCCCAGGAAAGGGGCTCATGCCAACCCCAGTGACGCGGAGGCCCAGCTT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTGTGCGGGTCATTAAGCAGACCTCCCCAGGAAAGGGGCTCATGCCAACCCCAGTGACGCGGAGGCCCAGCTT 518
Query 519 CGAAGGAACCGGCGATTCGTTTGCGTC----------------------------------------------- 545
|||||||||||||||||||||||||||
Sbjct 519 CGAAGGAACCGGCGATTCGTTTGCGTCCTACCACCAGCTGAGCGGTACCCCCTACGAGGGCCCAAGCTTCGGCG 592
Query 546 -------------------------------------------------------------------------- 545
Sbjct 593 CTGACGGCCCCACGGCGCTGGAGGAGATGCCGCGGCCGTACGTGGACTACCTTTTCCCCGGAGTCGGCCCCCAC 666
Query 546 -------------------------------------------------------------------------- 545
Sbjct 667 GGGCCCGGCCACCAGCACCAGCACCCACCCAAGGGCTACGGTGCCAGCGTAGAGGCAGCAGGGGCACACTTCCC 740
Query 546 -------------------------------------------------------------------------- 545
Sbjct 741 GCTGCAGGGCGCGCACTACGGGCGGCCGCACCTGCTGGTGCCTGGGGAACCCCTGGGCTACGGAGTGCAGCGCA 814
Query 546 -------------------------------------------------------------------------- 545
Sbjct 815 GCCCCTCCTTCCAGAGCAAGACGCCGCCGGAGACCGGGGGTTACGCCAGCCTGCCCACGAAGGGCCAGGGAGGA 888
Query 546 -------------------------------------------------------------------------- 545
Sbjct 889 CCGCCAGGCGCCGGCCTCGCTTTCCCACCCCCTGCCGCCGGGCTCTACGTGCCGCACCCACACCACAAGCAGGC 962
Query 546 -------------------------------------------------------------------------- 545
Sbjct 963 CGGTCCCGCGGCCCACCAGCTGCATGTGCTGGGCTCCCGCAGCCAGGTGTTCGCCAGCGACAGCCCCCCGCAGA 1036
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1037 GCCTGCTCACTCCCTCGCGGAACAGCCTCAACGTGGACCTGTATGAATTGGGCAGCACCTCCGTCCAGCAGTGG 1110
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1111 CCGGCTGCCACCCTGGCCCGCCGGGACTCCCTGCAGAAGCCGGGCCTGGAGGCGCCGCCGCGCGCGCACGTGGC 1184
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1185 CTTCCGGCCTGACTGCCCAGTGCCCAGCAGGACCAACTCCTTCAACAGCCACCAGCCGCGGCCCGGTCCGCCTG 1258
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1259 GCAAGGCCGAGCCCTCCCTGCCCGCCCCCAACACCGTGACGGCTGTCACGGCCGCGCACATCTTGCACCCGGTG 1332
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1333 AAGAGCGTGCGTGTGCTGAGGCCGGAGCCGCAGACGGCTGTGGGGCCCTCGCACCCCGCCTGGGTGCCCGCGCC 1406
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1407 TGCCCCGGCCCCCGCCCCCGCCCCCGCCCCGGCTGCGGAGGGCTTGGACGCCAAGGAGGAGCATGCCCTGGCGC 1480
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1481 TGGGCGGCGCAGGCGCCTTCCCGCTGGACGTGGAGTACGGAGGCCCAGACCGGAGGTGCCCGCCTCCGCCCTAC 1554
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1555 CCGAAGCACCTGCTGCTGCGCAGCAAGTCGGAGCAGTACGACCTGGACAGCCTGTGCGCAGGCATGGAGCAGAG 1628
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1629 CCTCCGTGCGGGCCCCAACGAGCCCGAGGGCGGCGACAAGAGCCGCAAAAGCGCCAAGGGGGACAAAGGCGGAA 1702
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1703 AGGATAAAAAGCAGATTCAGACCTCTCCCGTTCCCGTCCGCAAAAACAGCAGAGACGAAGAGAAGAGAGAGTCA 1776
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1777 CGCATCAAGAGCTACTCGCCATACGCCTTTAAGTTCTTCATGGAGCAGCACGTGGAGAATGTCATCAAAACCTA 1850
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1851 CCAGCAGAAGGTTAACCGGAGGCTGCAGCTGGAGCAAGAAATGGCCAAAGCTGGACTCTGTGAAGCTGAGCAGG 1924
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1925 AGCAGATGCGGAAGATCCTCTACCAGAAAGAGTCTAATTACAACAGGTTAAAGAGGGCCAAGATGGACAAGTCT 1998
Query 546 -------------------------------------------------------------------------- 545
Sbjct 1999 ATGTTTGTCAAGATCAAAACCCTGGGGATCGGTGCCTTTGGAGAAGTGTGCCTTGCTTGTAAGGTGGACACTCA 2072
Query 546 -------------------------------------------------------------------------- 545
Sbjct 2073 CGCCCTGTACGCCATGAAGACCCTAAGGAAAAAGGATGTCCTGAACCGGAATCAGGTGGCCCACGTCAAGGCCG 2146
Query 546 -------------------------------------------------------------------------- 545
Sbjct 2147 AGAGGGACATCCTGGCCGAGGCAGACAATGAGTGGGTGGTCAAACTCTACTACTCCTTCCAAGACAAAGACAGC 2220
Query 546 -----------------------------------------------------------------CTTCCCTGA 554
|||||||||
Sbjct 2221 CTGTACTTTGTGATGGACTACATCCCTGGTGGGGACATGATGAGCCTGCTGATCCGGATGGAGGTCTTCCCTGA 2294
Query 555 GCACCTGGCCCGGTTCTACATCGCAGAGCTGACTTTGGCCATTGAGAGTGTCCACAAGATGGGCTTCATCCACC 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GCACCTGGCCCGGTTCTACATCGCAGAGCTGACTTTGGCCATTGAGAGTGTCCACAAGATGGGCTTCATCCACC 2368
Query 629 GAGACATCAAGCCTGATAACATTTTGATAGATCTGGATGGTCACATTAAACTCACAGATTTCGGCCTCTGCACT 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GAGACATCAAGCCTGATAACATTTTGATAGATCTGGATGGTCACATTAAACTCACAGATTTCGGCCTCTGCACT 2442
Query 703 GGGTTCAG--TGACTCACAANTCCCAAANTATTNCCAGAAANGNAGCCATGTCAGACAGGACAGCATGGAGCCC 774
|||||||| .|||||||||.||| ||.||||.|||||||.|.||||||||||||||||||||||||||||||
Sbjct 2443 GGGTTCAGGTGGACTCACAATTCC--AAATATTACCAGAAAGGGAGCCATGTCAGACAGGACAGCATGGAGCCC 2514
Query 775 AGCGACNTTCTGGGGATGATGTGGTTCTANCNGGTCGGTGTGGGGACAGGCTG-AGACCCCTAGAGCAGAGGGC 847
||||||. ||| ||||||||||| ||||.|. |||||||||||||||||||| ||| ||||||||||||||||
Sbjct 2515 AGCGACC-TCT-GGGATGATGTG--TCTAACT-GTCGGTGTGGGGACAGGCTGAAGA-CCCTAGAGCAGAGGGC 2582
Query 848 GCGGAAGCAGCACCAGAGGTGCCTGGCACATTCACTGGTGGGGACTCCAAACTACATCGCACCCGAGGTGCTCC 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2583 GCGGAAGCAGCACCAGAGGTGCCTGGCACATTCACTGGTGGGGACTCCAAACTACATCGCACCCGAGGTGCTCC 2656
Query 922 TCCGCAAAGGGTACACTCAACTCTGTGACTGGTGGAGTGTTGGAGTGATTCTCTTCGAGATGCTGGTGGGGCAG 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2657 TCCGCAAAGGGTACACTCAACTCTGTGACTGGTGGAGTGTTGGAGTGATTCTCTTCGAGATGCTGGTGGGGCAG 2730
Query 996 CCGCCCTTTTTGGCACCTACTCCCACAGAAACCCAGCTGAAGGTGATCAACTGGGAGAACACGCTCCACATTCC 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2731 CCGCCCTTTTTGGCACCTACTCCCACAGAAACCCAGCTGAAGGTGATCAACTGGGAGAACACGCTCCACATTCC 2804
Query 1070 AGCCCAGGTGAAGCTGAGCCCTGAGGCCAGGGACCTCATCACCAAGCTGTGCTGCTCCGCAGACCACCGCCTGG 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2805 AGCCCAGGTGAAGCTGAGCCCTGAGGCCAGGGACCTCATCACCAAGCTGTGCTGCTCCGCAGACCACCGCCTGG 2878
Query 1144 GGCGGAATGGGGCCGATGACCTGAAGGCCCACCCCTTCTTCAGCGCCATTGACTTCTCCAGTGACATCCGGAAG 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2879 GGCGGAATGGGGCCGATGACCTGAAGGCCCACCCCTTCTTCAGCGCCATTGACTTCTCCAGTGACATCCGGAAG 2952
Query 1218 CAGCCAGCCCCCTACGTTCCCACCATCAGCCACCCCATGGACACCTCGAATTTCGACCCCGTAGATGAAGAAAG 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2953 CAGCCAGCCCCCTACGTTCCCACCATCAGCCACCCCATGGACACCTCGAATTTCGACCCCGTAGATGAAGAAAG 3026
Query 1292 CCCTTGGAACGATGCCAGCGAAGGTAGCACCAAGGCCTGGGACACACTCACCTCGCCCAATAACAAGCATCCTG 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3027 CCCTTGGAACGATGCCAGCGAAGGTAGCACCAAGGCCTGGGACACACTCACCTCGCCCAATAACAAGCATCCTG 3100
Query 1366 AGCACGCATTTTACGAATTCACCTTCCGAAGGTTCTTTGATGACAATGGCTACCCCTTTCGATGCCCAAAGCCT 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3101 AGCACGCATTTTACGAATTCACCTTCCGAAGGTTCTTTGATGACAATGGCTACCCCTTTCGATGCCCAAAGCCT 3174
Query 1440 TCAGGAGCAGAAGCTTCACAGGCTGAGAGCTCAGATTTAGAAAGCTCTGATCTGGTGGATCAGACTGAAGGCTG 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3175 TCAGGAGCAGAAGCTTCACAGGCTGAGAGCTCAGATTTAGAAAGCTCTGATCTGGTGGATCAGACTGAAGGCTG 3248
Query 1514 CCAGCCTGTGTACGTG 1529
||||||||||||||||
Sbjct 3249 CCAGCCTGTGTACGTG 3264
