Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15071
- Subject:
- NR_138024.2
- Aligned Length:
- 6328
- Identities:
- 407
- Gaps:
- 5921
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGGTCCTGAGTCGCGACCCTGGTCCGGACCTGACCTGAATTGCGACCCCAACCTGGACTGCTCCCCTGAC 74
Query 1 --------------------------ATGGCCCGGCACGTGTTCCTAACGGGGCCCCCAGGAGTTGGAAAAACA 48
|||||||||||||||||||||||||||||||||
Sbjct 75 CGCAACCCCTACCCCCGCCCACCAGTATGGCCCGGCACGTGTTCCTAACGGGGCCCCCA--------------- 133
Query 49 ACATTGATCCATAAAGCCAGTGAGGTTTTAAAATCCTCTGGTGTGCCTGTTGATGGATTTTATACCGAAGAAGT 122
Sbjct 134 -------------------------------------------------------------------------- 133
Query 123 CAGACAGGGAGGGAGAAGAATAGGATTCGATGTCGTCACGTTGTCCGGCACCCGGGGGCCTTTATCGAGAGTTG 196
Sbjct 134 -------------------------------------------------------------------------- 133
Query 197 GGTTAGAGCCTCCACCTGGAAAACGTGAATGCCGAGTTGGGCAGTATGTGGTCGACCTGACTTCTTTTGAGCAG 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 134 GGTTAGAGCCTCCACCTGGAAAACGTGAATGCCGAGTTGGGCAGTATGTGGTCGACCTGACTTCTTTTGAGCAG 207
Query 271 TTGGCACTACCCGTCTTGAGGAAT----GCCGACTGCAGCAGTGGCCCAGGGCAAAGAGTGTGCGTCATCGATG 340
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 208 TTGGCACTACCCGTCTTGAGGAATGTGAGCCGACTGCAGCAGTGGCCCAGGGCAAAGAGTGTGCGTCATCGATG 281
Query 341 AGATTGGGAAGATGGAGCTCTTCAGTCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCCCAGGGACT 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 282 AGATTGGGAAGATGGAGCTCTTCAGTCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCCCAGGGACT 355
Query 415 ATAATCCTTGGCACAATCCCAGTTCCTAAAGGAAAGCCACTGGCTCTTGTAGAAGAAATCAGAAACAGAAAGGA 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 ATAATCCTTGGCACAATCCCAGTTCCTAAAGGAAAGCCACTGGCTCTTGTAGAAGAAATCAGAAACAGAAAGGA 429
Query 489 TGTGAAGGTGTTTAATGTCACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAGCA 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 430 TGTGAAGGTGTTTAATGTCACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAGCA 503
Query 563 GCAGGAAG------------------------------------------------------------------ 570
||||||||
Sbjct 504 GCAGGAAGTGAAGACACGTGCATTCCTGCCTTCCGTGAAGGAGTGCCCAGTTCAAGAGGAGCCTGATGGAGCCC 577
Query 571 -------------------------------------------------------------------------- 570
Sbjct 578 TGCCTGTCGAGGCTGTATGCCTATGGGGTTATGGAACCTTGTGGGCTTTTCTAGAGAAAACTCAACAGCTGTTT 651
Query 571 -------------------------------------------------------------------------- 570
Sbjct 652 CCCATAAAATGTTTAAAAGATCAAATTAGCCTTAATGCTGGATTGTCTGTACAAGATTAACTATCCATTGTGGC 725
Query 571 -------------------------------------------------------------------------- 570
Sbjct 726 TTATCTATGCTTAAAGATTTCTTGTTTATTTCCTCTTGCAGTCATGCACATGATTTGGGTAAACTGTGAGATGA 799
Query 571 -------------------------------------------------------------------------- 570
Sbjct 800 GAAATGGTTTTCAGAGTATTAGATGGAATTCACCCCCGTTGAAGTTTATAAATGTGTTCAGGGGAAGCGGGAGG 873
Query 571 -------------------------------------------------------------------------- 570
Sbjct 874 AAAGAGTTCACTGCCTAATCAGTTTTGCATGTCATGAAAATTAAATTCCTCTCCAGGTGCAGCTTCAGCCTCAT 947
Query 571 -------------------------------------------------------------------------- 570
Sbjct 948 GCAACTTAAAGTGATAACAGTTATTTGATTTTTTAAAAAATATTATTCCAAAAGAAAACCATTTTAGGTCATCT 1021
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1022 CCCCCAACTCTGTTTGCTTACTGCTTAATAAATATAAAAATAAATCTGATGGTTACAGACAGGAGGCATTGTGT 1095
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1096 GGGAGGAATACACAACCTTTGGAAGTGTTGATAGCATCTGATATTCAGCCGACCAGATGACAAGAGCTCAGGCC 1169
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1170 CACGGGTTTGCATAAGAGCACTGCTTTGCCTTAGTTTACTCGGGAGCAATTTTGAATCTTTCTATGCCTAGTTT 1243
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1244 CCCTTCCAGAAAAGCAGGAAGTGGCTGTCATCTCAGGAGTGATGTCACACCACAGAAGGAAACTGTCAACCACT 1317
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1318 CCACACAACTGTGGAGAGTGCCCAGTGCCAGGGGCTGGGCTTATCAGGAATAATGGTGTAGCAATGCGGAGTTC 1391
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1392 AGCCCATAACAGGGGTACTATAAAAATGAAGTAGGAAAGTAGAAGAGACCCCTGAAACCCCAGAACTGATAGAG 1465
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1466 GATAAAAACTTCCCTCCAAGTGGTAGATGGTACTGGAGTGATAAACAGTTCAGTGTTTTTAGGTCATTTTTGGT 1539
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1540 GAAGATCTATGAATTTCCAGGATTTTTTTTTAACAAATTAGCATTGGCTACAAACCCACTGGTATAAGCAGCAG 1613
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1614 TGTGCCTTCTCTCTAACTGTGGACAAGTCGGGCATGTGGCGGGTGAGGAGCCCTGGGCTGGGCACTGGGGCACA 1687
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1688 GTGAATGGGGCGGGAGGGGCTCACATCAAAACCAAAATGGCACGCAGCCCAGGTCTGGTTCCTCCATCAGTGTC 1761
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1762 TCTTTCCTCAGCGCTTTTCTTCCGAGGTAACTTTGTGAAGCTTGACTTGGACTTGCCTAGCCTTGGAGGGACCA 1835
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1836 CAACAGGGAGGCCTAATAGATTATGAACTAAGCCCTCAAAAGGGCTACCTGCCCAGGAGGAGGAAGTGGGCATC 1909
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1910 TCCTTCCACAGTCCCTGCCTGGCGGGGCTGTTCAGGGAGACTGAGTTCCGAGCTCAGGATGTCTGGCAGGCTGG 1983
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1984 CTGTGACTTCCAGCCACCATCACCAGGACACCGGTGTGGGCTGCATGCCTCAGTGGGCCAGGAGAGGCACGGCC 2057
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2058 TCTGAGTTGGGTAGAGGCTTCCCACAAAGGCCTGGGAACCTGATCCTGGCCGTAAATCTGAAAGTACCACAGCC 2131
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2132 CTCAGGAGAACCAAGAGATAGGGAGGCAGGCTGGGGAAATGTCATCAATGTGCACCCAGGCGTGGTGGAGCTGG 2205
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2206 TCAGCCCCAGCTGGAGTGGGACCCCATCAAGATGGAGCCTTTCCTGGCACCTCCGGGAGGCCGTTTTGCGTTTC 2279
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2280 CGCCCTTCATGCATCTGAAACACCAAGGGCCATGTTCCTTCTGGTGCTTGTCCTTTTGAGCTTGGTGTTTCAGC 2353
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2354 CGTGTCTGTTTTGTAGACTTTGATTTTGTCTTAAATGAGAAAGAAAGCTGGTGAAGGTTATTTCAAAGTTAAAT 2427
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2428 AGCTAGTCTGAGGGGCTTATCACTGAAGCCAGTTGTGCTTATGTGGGGTGGGAGTGTCACTGCCTACTTGAAAG 2501
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2502 TATGCACTTGTGTGGAACAGATTCAGGGTGGCCCCTAGCACTTGGGGCTGCGGGAGCTTCTGCACACTTTCCCT 2575
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2576 TTAACGGTAAAGAGACAAGCTTGGAGTGTTTAAGTGGTTCGTTCAGGAGCACAGTGATAGCGGTGACAAAGGAG 2649
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2650 ATTTGAACCCACGTCTGCGTGGCTCCAAAGTTCACTCTTTCATCACTCCCTGCTGCGTCCTTCTTGAGGCTTTA 2723
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2724 GCATTTTTAGTGTGTTTTGTGCCCCCAGACCTCAGAGTTGACATTTAGCAGTGATAAACTGCTGTAAATCCAAA 2797
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2798 GAACGTTTAGTGTCTCTTGTGGTGAGGTCCTGAAATGATTGTTGTATTAGTCAAACAGAATGATCATGGAGCAT 2871
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2872 GTATGGAGATGTCAGATGCAATCCCTGTATTGTAAGGCAATGACATTTAATGAAGGATAAGATGAATTCACAGA 2945
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2946 TAACTAGAACTCAGGGCCAAACGCACACAGCCTGTAGCAACAGTGTCATGCTGAGATTTAAAGGAAGAAGAGGT 3019
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3020 GCCGTGGCAGAACTCCACGTGACCGTCCCCTCCCTGCACGCAGCCAGGATGAGAGGAGCAGAGCTGAGCGCCAC 3093
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3094 CTCCCTGTCGGTGCCACGGCTGAGGTGAGGAGCTCTTGCCGGATGGTGGGGTGGGGGCAGCAGGGCAGATTGAA 3167
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3168 GTCAGGGATTCTCTTATACCTGAGTTTGGAATGCCTCCTATTCAAACAAAGCAAAATATCTAACAGATGGTTGG 3241
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3242 ATATGAGTCTCAGGGAGGAATTCAATTTGAAAAGCACAGAATTAACATGTATTGCTTATATGAAGAATCTCAGC 3315
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3316 TAGAATAACAAGGTCGGATGGGAGGAATCAGGACTGATTTGAAGCACGATTTACTAAATCATTCTTTCCTTTTC 3389
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3390 CTCCTTAGCAGATCATACCGCCAGCTGCTTAACACGTAATAGTTTAATAAATTGTTTCTTCTTACCTCTCAGTG 3463
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3464 AGGGTAAGCACATGCAGGGAGATGGGTGAGTCTTTTAAATGGATAGTGTCATCTCTGATGATCAGCCTTGACAG 3537
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3538 GGAGAGATCCTAGTAAAGCTGCAAATTCAGGCACTCAGTTCCCAGCCCTCCAGTTATCAAGGGGGTGGGAACGC 3611
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3612 TGGTGGGCTGGAAAATGTGGAACAGACCTGCTCCTCTTCTTTTCCTGCCAATTACCGTATTCATAGAAGGTTGT 3685
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3686 GTCTGTGGATCACACCTGTGTGTGTGCTGATGGCGGATGCTTGTGTAGCATAGTGACTTGGGACAAAACAGCAT 3759
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3760 GGTAGATGAGGCTGGAGACGGGTGGGCTAAGTAAACAGGCATTGCATTGCACATTTTGTGGGCAAAGAAGTTGA 3833
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3834 AGCATCGCATGATTTTAACAAATTACTTGCCAGATGATTTCAACACACTGCAAAATTTAGAATCAATAATGCCA 3907
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3908 AATTGGCCACATGATTTATATAAAACCAAGTGCTATGGTTTTAATATTATCTTTAGAGGAGAAACCATTTTGAT 3981
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3982 CTGTGTCCAAATAACTCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCTTGAGCTGGAGTGC 4055
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4056 AGTGGTGCTATCTCGGCTCACTGTAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAACCTCCTGAGT 4129
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4130 AGCTGGGATTACAGGCACCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCAT 4203
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4204 GTTGGCCAAGCTGGTCTCGAACTCCTGACCTCATGATTTGCCTGCCTCAGCCTACAAAAGTGCTGGGATTACAG 4277
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4278 GCGTGAGCCACCGTGCCCAGCCCCCAAATAACTCTTGAACTGGAAAATAACTCTTTAGCTATATACTGGCAGAA 4351
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4352 TATTTGAACAACTCTAGCAAGAAATGTCAGTTTAGGGATGCCTCCTCTAAATGGGGGCTTAGAATATAACATTT 4425
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4426 TGCAGGAAGTCCTTTCTGATACATAGCTGACTAGATGAAGGACCAGATTAACAAGTTCATGAGTTGTAAATATA 4499
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4500 AAAGTTGTGTACCACGATAAAAAAGAAAAAGAAGTATGGCTGCACTGTTGATGGCTGGTCAAACAGCCCCCAAG 4573
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4574 AATCCTGGGGTGACTCCAATACTGCCACCTTTTCTCTGTGGGTGCAGTTGCCTGCGGATGTGTGTGCACATCTG 4647
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4648 TGCCTCGGTATGCACACTCGAGATGCCCGCTCTCATAGACGGTGCAGAGCGTCACTGCATTCCTATCTGATTAA 4721
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4722 TGTGACCTTAGTGTTGTAGATACACTGTGTCACTTTCATCCTCCCTCCTCCCCACAAAAGATGCCACGAGAACT 4795
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4796 CGTGAACTGTGATAAGCAATGAACAGAATAACTGTTGAAGAAGCACCTCATGAACCTCCCCAGAGAAACGGGAT 4869
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4870 GGAGGAGCACCCAGGGTGCTCTTGCTCTCTTGCCTGCGCTGCCATTTCCTTCCAGCCTGGGTTTCTAGCTCTTT 4943
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4944 GGGGAGATTCCCCGTTTTGTGGAATGCTTTCTGTGTTTCCTACTTCTGGATGCCTAAGGAGTGGCCAGTCATAC 5017
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5018 TCCTGGCTGACCACTGCCAGGCACCGTGGTTTTCCTCACTGAACTCAAGGAGTCACCCTCCGTGGGGAGGCCAC 5091
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5092 ACTCACAGCTCCAGGCCTGCCATTTAGCCCTTGGGGCTTGGCTGTAAAGTTGCCCAAGAGGATTACAGGAGCTG 5165
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5166 CCAGCCAAGTTTAATTTGGCCACCTTAGAGAACTGCAGCAAGGCCCTATCAGCTTCCCATTAGACAAACAACTG 5239
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5240 CATTTAAATTAAATAAAGTTTGCACCTCTAGGGAGTGCTGACCTGAAAATAAGAACCTTCTGTCTGTGATTATA 5313
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5314 GAGTACACTTGCTTTTATTAATTGCTGATTCTTAGTTTACAAAAAAAAAAATTAGAAAAGCATTACCATTTACT 5387
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5388 TTCCAAGGGGCAAGAGATTCTCTACAATACCCTTCCCCCAACCCTCTCCTCAAATTTCCAAATCCTAAATACTT 5461
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5462 TGAAGAAATTTGTGTGACTGTTTAAAATTGAGTATTTCCTTCTAACTATTGTCTTTTGAAAAGGGATGGTTCAC 5535
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5536 CAGGCCAGTGATACTCTATGGACTGCATTTTGGGACCTCTACCCCAGCAAGGATACAGGTTCCTGGGGTCTTGA 5609
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5610 AGATGGGAAAAGTTGTCTCAGAATTTACCCAAATGTCGTTCTCACCATAAAAGATATACTTGTAGAAATGAGAA 5683
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5684 GCTTCAGTATAACTCAAAACACTGGACGCAGCAATAACTATAAACATTTTAATTTCAAAAACAAAGGTGTGTGC 5757
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5758 GATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGCTG 5831
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5832 GCGGCCCACCAATCGCCTGGACTACAGTGAGGAGCATTGTGTGACTCCGCGGTGGATTTCCATGCACCGAATGG 5905
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5906 ACTCAGTTTCTAAACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCATGA 5979
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5980 TCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGCATAAATATTATAAAGAAATAGGGTTT 6053
Query 571 -------------------------------------------------------------------------- 570
Sbjct 6054 TCTTGACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTTTT 6127
Query 571 -------------------------------------- 570
Sbjct 6128 TCATGGTAACAGTAATGTATAAAGTGCCGATGATGTAA 6165
