Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15071
- Subject:
- NR_138025.2
- Aligned Length:
- 6256
- Identities:
- 352
- Gaps:
- 5878
Alignment
Query 1 ATGGCCCGGCACGTGTTCCTAACGGGGCCCCCAGGAGTTGGAAAAACAACATTGATCCATAAAGCCAGTGAGGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTTAAAATCCTCTGGTGTGCCTGTTGATGGATTTTATACCGAAGAAGTCAGACAGGGAGGGAGAAGAATAGGAT 148
|||.|||
Sbjct 1 ------------------------------------------------------GGGCGGG------------- 7
Query 149 TC--GATGTCGTCA-CGTTGTCCGGCACCCGGGGGCCTTTATCGAGAGTTGGGTTAGAGCCTCCACCTGGAAAA 219
|| || ||||..| |.|.|||||| ||| .|.|||..||.|.|| ||.|.|||||||
Sbjct 8 TCCTGA-GTCGCGACCCTGGTCCGG-ACC---TGACCTGAATTGCGA------------CCCCAACCTGGA--- 61
Query 220 CGTGAATGCCGAGTTGGGCAGTATGTGGTCGACCTGACTTCTTTTG------------------AGCAGT-TGG 274
.||.|| .|||||| .| |.|||| |||
Sbjct 62 ------------------------CTGCTC-CCCTGAC------CGCAACCCCTACCCCCGCCCACCAGTATGG 104
Query 275 CACTACCCGTCTT------GAGG----AATGCCGACTGCAGCAGTGGCCCAGGGCAAAGAGTGTGCGTCATCGA 338
|.|..|.|||.|| |.|| .|.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 105 CCCGGCACGTGTTCCTAACGGGGCCCCCAGGCCGACTGCAGCAGTGGCCCAGGGCAAAGAGTGTGCGTCATCGA 178
Query 339 TGAGATTGGGAAGATGGAGCTCTTCAGTCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCCCAGGGA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 TGAGATTGGGAAGATGGAGCTCTTCAGTCAGCTTTTCATTCAAGCTGTTCGTCAGACGCTGTCTACCCCAGGGA 252
Query 413 CTATAATCCTTGGCACAATCCCAGTTCCTAAAGGAAAGCCACTGGCTCTTGTAGAAGAAATCAGAAACAGAAAG 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 253 CTATAATCCTTGGCACAATCCCAGTTCCTAAAGGAAAGCCACTGGCTCTTGTAGAAGAAATCAGAAACAGAAAG 326
Query 487 GATGTGAAGGTGTTTAATGTCACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAG 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 GATGTGAAGGTGTTTAATGTCACCAAGGAAAACAGAAACCACCTTCTGCCAGATATCGTGACGTGCGTGCAGAG 400
Query 561 CAGCAGGAAG---------------------------------------------------------------- 570
||||||||||
Sbjct 401 CAGCAGGAAGTGAAGACACGTGCATTCCTGCCTTCCGTGAAGGAGTGCCCAGTTCAAGAGGAGCCTGATGGAGC 474
Query 571 -------------------------------------------------------------------------- 570
Sbjct 475 CCTGCCTGTCGAGGCTGTATGCCTATGGGGTTATGGAACCTTGTGGGCTTTTCTAGAGAAAACTCAACAGCTGT 548
Query 571 -------------------------------------------------------------------------- 570
Sbjct 549 TTCCCATAAAATGTTTAAAAGATCAAATTAGCCTTAATGCTGGATTGTCTGTACAAGATTAACTATCCATTGTG 622
Query 571 -------------------------------------------------------------------------- 570
Sbjct 623 GCTTATCTATGCTTAAAGATTTCTTGTTTATTTCCTCTTGCAGTCATGCACATGATTTGGGTAAACTGTGAGAT 696
Query 571 -------------------------------------------------------------------------- 570
Sbjct 697 GAGAAATGGTTTTCAGAGTATTAGATGGAATTCACCCCCGTTGAAGTTTATAAATGTGTTCAGGGGAAGCGGGA 770
Query 571 -------------------------------------------------------------------------- 570
Sbjct 771 GGAAAGAGTTCACTGCCTAATCAGTTTTGCATGTCATGAAAATTAAATTCCTCTCCAGGTGCAGCTTCAGCCTC 844
Query 571 -------------------------------------------------------------------------- 570
Sbjct 845 ATGCAACTTAAAGTGATAACAGTTATTTGATTTTTTAAAAAATATTATTCCAAAAGAAAACCATTTTAGGTCAT 918
Query 571 -------------------------------------------------------------------------- 570
Sbjct 919 CTCCCCCAACTCTGTTTGCTTACTGCTTAATAAATATAAAAATAAATCTGATGGTTACAGACAGGAGGCATTGT 992
Query 571 -------------------------------------------------------------------------- 570
Sbjct 993 GTGGGAGGAATACACAACCTTTGGAAGTGTTGATAGCATCTGATATTCAGCCGACCAGATGACAAGAGCTCAGG 1066
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1067 CCCACGGGTTTGCATAAGAGCACTGCTTTGCCTTAGTTTACTCGGGAGCAATTTTGAATCTTTCTATGCCTAGT 1140
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1141 TTCCCTTCCAGAAAAGCAGGAAGTGGCTGTCATCTCAGGAGTGATGTCACACCACAGAAGGAAACTGTCAACCA 1214
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1215 CTCCACACAACTGTGGAGAGTGCCCAGTGCCAGGGGCTGGGCTTATCAGGAATAATGGTGTAGCAATGCGGAGT 1288
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1289 TCAGCCCATAACAGGGGTACTATAAAAATGAAGTAGGAAAGTAGAAGAGACCCCTGAAACCCCAGAACTGATAG 1362
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1363 AGGATAAAAACTTCCCTCCAAGTGGTAGATGGTACTGGAGTGATAAACAGTTCAGTGTTTTTAGGTCATTTTTG 1436
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1437 GTGAAGATCTATGAATTTCCAGGATTTTTTTTTAACAAATTAGCATTGGCTACAAACCCACTGGTATAAGCAGC 1510
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1511 AGTGTGCCTTCTCTCTAACTGTGGACAAGTCGGGCATGTGGCGGGTGAGGAGCCCTGGGCTGGGCACTGGGGCA 1584
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1585 CAGTGAATGGGGCGGGAGGGGCTCACATCAAAACCAAAATGGCACGCAGCCCAGGTCTGGTTCCTCCATCAGTG 1658
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1659 TCTCTTTCCTCAGCGCTTTTCTTCCGAGGTAACTTTGTGAAGCTTGACTTGGACTTGCCTAGCCTTGGAGGGAC 1732
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1733 CACAACAGGGAGGCCTAATAGATTATGAACTAAGCCCTCAAAAGGGCTACCTGCCCAGGAGGAGGAAGTGGGCA 1806
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1807 TCTCCTTCCACAGTCCCTGCCTGGCGGGGCTGTTCAGGGAGACTGAGTTCCGAGCTCAGGATGTCTGGCAGGCT 1880
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1881 GGCTGTGACTTCCAGCCACCATCACCAGGACACCGGTGTGGGCTGCATGCCTCAGTGGGCCAGGAGAGGCACGG 1954
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1955 CCTCTGAGTTGGGTAGAGGCTTCCCACAAAGGCCTGGGAACCTGATCCTGGCCGTAAATCTGAAAGTACCACAG 2028
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2029 CCCTCAGGAGAACCAAGAGATAGGGAGGCAGGCTGGGGAAATGTCATCAATGTGCACCCAGGCGTGGTGGAGCT 2102
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2103 GGTCAGCCCCAGCTGGAGTGGGACCCCATCAAGATGGAGCCTTTCCTGGCACCTCCGGGAGGCCGTTTTGCGTT 2176
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2177 TCCGCCCTTCATGCATCTGAAACACCAAGGGCCATGTTCCTTCTGGTGCTTGTCCTTTTGAGCTTGGTGTTTCA 2250
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2251 GCCGTGTCTGTTTTGTAGACTTTGATTTTGTCTTAAATGAGAAAGAAAGCTGGTGAAGGTTATTTCAAAGTTAA 2324
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2325 ATAGCTAGTCTGAGGGGCTTATCACTGAAGCCAGTTGTGCTTATGTGGGGTGGGAGTGTCACTGCCTACTTGAA 2398
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2399 AGTATGCACTTGTGTGGAACAGATTCAGGGTGGCCCCTAGCACTTGGGGCTGCGGGAGCTTCTGCACACTTTCC 2472
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2473 CTTTAACGGTAAAGAGACAAGCTTGGAGTGTTTAAGTGGTTCGTTCAGGAGCACAGTGATAGCGGTGACAAAGG 2546
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2547 AGATTTGAACCCACGTCTGCGTGGCTCCAAAGTTCACTCTTTCATCACTCCCTGCTGCGTCCTTCTTGAGGCTT 2620
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2621 TAGCATTTTTAGTGTGTTTTGTGCCCCCAGACCTCAGAGTTGACATTTAGCAGTGATAAACTGCTGTAAATCCA 2694
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2695 AAGAACGTTTAGTGTCTCTTGTGGTGAGGTCCTGAAATGATTGTTGTATTAGTCAAACAGAATGATCATGGAGC 2768
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2769 ATGTATGGAGATGTCAGATGCAATCCCTGTATTGTAAGGCAATGACATTTAATGAAGGATAAGATGAATTCACA 2842
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2843 GATAACTAGAACTCAGGGCCAAACGCACACAGCCTGTAGCAACAGTGTCATGCTGAGATTTAAAGGAAGAAGAG 2916
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2917 GTGCCGTGGCAGAACTCCACGTGACCGTCCCCTCCCTGCACGCAGCCAGGATGAGAGGAGCAGAGCTGAGCGCC 2990
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2991 ACCTCCCTGTCGGTGCCACGGCTGAGGTGAGGAGCTCTTGCCGGATGGTGGGGTGGGGGCAGCAGGGCAGATTG 3064
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3065 AAGTCAGGGATTCTCTTATACCTGAGTTTGGAATGCCTCCTATTCAAACAAAGCAAAATATCTAACAGATGGTT 3138
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3139 GGATATGAGTCTCAGGGAGGAATTCAATTTGAAAAGCACAGAATTAACATGTATTGCTTATATGAAGAATCTCA 3212
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3213 GCTAGAATAACAAGGTCGGATGGGAGGAATCAGGACTGATTTGAAGCACGATTTACTAAATCATTCTTTCCTTT 3286
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3287 TCCTCCTTAGCAGATCATACCGCCAGCTGCTTAACACGTAATAGTTTAATAAATTGTTTCTTCTTACCTCTCAG 3360
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3361 TGAGGGTAAGCACATGCAGGGAGATGGGTGAGTCTTTTAAATGGATAGTGTCATCTCTGATGATCAGCCTTGAC 3434
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3435 AGGGAGAGATCCTAGTAAAGCTGCAAATTCAGGCACTCAGTTCCCAGCCCTCCAGTTATCAAGGGGGTGGGAAC 3508
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3509 GCTGGTGGGCTGGAAAATGTGGAACAGACCTGCTCCTCTTCTTTTCCTGCCAATTACCGTATTCATAGAAGGTT 3582
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3583 GTGTCTGTGGATCACACCTGTGTGTGTGCTGATGGCGGATGCTTGTGTAGCATAGTGACTTGGGACAAAACAGC 3656
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3657 ATGGTAGATGAGGCTGGAGACGGGTGGGCTAAGTAAACAGGCATTGCATTGCACATTTTGTGGGCAAAGAAGTT 3730
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3731 GAAGCATCGCATGATTTTAACAAATTACTTGCCAGATGATTTCAACACACTGCAAAATTTAGAATCAATAATGC 3804
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3805 CAAATTGGCCACATGATTTATATAAAACCAAGTGCTATGGTTTTAATATTATCTTTAGAGGAGAAACCATTTTG 3878
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3879 ATCTGTGTCCAAATAACTCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCTTGAGCTGGAGT 3952
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3953 GCAGTGGTGCTATCTCGGCTCACTGTAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAACCTCCTGA 4026
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4027 GTAGCTGGGATTACAGGCACCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACC 4100
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4101 ATGTTGGCCAAGCTGGTCTCGAACTCCTGACCTCATGATTTGCCTGCCTCAGCCTACAAAAGTGCTGGGATTAC 4174
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4175 AGGCGTGAGCCACCGTGCCCAGCCCCCAAATAACTCTTGAACTGGAAAATAACTCTTTAGCTATATACTGGCAG 4248
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4249 AATATTTGAACAACTCTAGCAAGAAATGTCAGTTTAGGGATGCCTCCTCTAAATGGGGGCTTAGAATATAACAT 4322
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4323 TTTGCAGGAAGTCCTTTCTGATACATAGCTGACTAGATGAAGGACCAGATTAACAAGTTCATGAGTTGTAAATA 4396
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4397 TAAAAGTTGTGTACCACGATAAAAAAGAAAAAGAAGTATGGCTGCACTGTTGATGGCTGGTCAAACAGCCCCCA 4470
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4471 AGAATCCTGGGGTGACTCCAATACTGCCACCTTTTCTCTGTGGGTGCAGTTGCCTGCGGATGTGTGTGCACATC 4544
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4545 TGTGCCTCGGTATGCACACTCGAGATGCCCGCTCTCATAGACGGTGCAGAGCGTCACTGCATTCCTATCTGATT 4618
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4619 AATGTGACCTTAGTGTTGTAGATACACTGTGTCACTTTCATCCTCCCTCCTCCCCACAAAAGATGCCACGAGAA 4692
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4693 CTCGTGAACTGTGATAAGCAATGAACAGAATAACTGTTGAAGAAGCACCTCATGAACCTCCCCAGAGAAACGGG 4766
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4767 ATGGAGGAGCACCCAGGGTGCTCTTGCTCTCTTGCCTGCGCTGCCATTTCCTTCCAGCCTGGGTTTCTAGCTCT 4840
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4841 TTGGGGAGATTCCCCGTTTTGTGGAATGCTTTCTGTGTTTCCTACTTCTGGATGCCTAAGGAGTGGCCAGTCAT 4914
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4915 ACTCCTGGCTGACCACTGCCAGGCACCGTGGTTTTCCTCACTGAACTCAAGGAGTCACCCTCCGTGGGGAGGCC 4988
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4989 ACACTCACAGCTCCAGGCCTGCCATTTAGCCCTTGGGGCTTGGCTGTAAAGTTGCCCAAGAGGATTACAGGAGC 5062
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5063 TGCCAGCCAAGTTTAATTTGGCCACCTTAGAGAACTGCAGCAAGGCCCTATCAGCTTCCCATTAGACAAACAAC 5136
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5137 TGCATTTAAATTAAATAAAGTTTGCACCTCTAGGGAGTGCTGACCTGAAAATAAGAACCTTCTGTCTGTGATTA 5210
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5211 TAGAGTACACTTGCTTTTATTAATTGCTGATTCTTAGTTTACAAAAAAAAAAATTAGAAAAGCATTACCATTTA 5284
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5285 CTTTCCAAGGGGCAAGAGATTCTCTACAATACCCTTCCCCCAACCCTCTCCTCAAATTTCCAAATCCTAAATAC 5358
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5359 TTTGAAGAAATTTGTGTGACTGTTTAAAATTGAGTATTTCCTTCTAACTATTGTCTTTTGAAAAGGGATGGTTC 5432
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5433 ACCAGGCCAGTGATACTCTATGGACTGCATTTTGGGACCTCTACCCCAGCAAGGATACAGGTTCCTGGGGTCTT 5506
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5507 GAAGATGGGAAAAGTTGTCTCAGAATTTACCCAAATGTCGTTCTCACCATAAAAGATATACTTGTAGAAATGAG 5580
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5581 AAGCTTCAGTATAACTCAAAACACTGGACGCAGCAATAACTATAAACATTTTAATTTCAAAAACAAAGGTGTGT 5654
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5655 GCGATGTTGTGTGCACAGTAAGGGTTGCGGGGCTTGGAGAACAAGCACGCGTCCCTGTGAAGCCCGCAGGGTGC 5728
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5729 TGGCGGCCCACCAATCGCCTGGACTACAGTGAGGAGCATTGTGTGACTCCGCGGTGGATTTCCATGCACCGAAT 5802
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5803 GGACTCAGTTTCTAAACTCACATCCTAACGTATCCTGGCTTTTCACAGAATACTGGAGACATGACTGCATGCAT 5876
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5877 GATCACGGTTCTTGTTGTGAAGCTGCCACCATGTTACGCTTAACAGCTGCATAAATATTATAAAGAAATAGGGT 5950
Query 571 -------------------------------------------------------------------------- 570
Sbjct 5951 TTTCTTGACACTTAGATTTAACCTTAATGCATCTGCCCAGCTGATGGTATCAGACGTGCTGCTGTTCATTTCTT 6024
Query 571 ---------------------------------------- 570
Sbjct 6025 TTTCATGGTAACAGTAATGTATAAAGTGCCGATGATGTAA 6064
