Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15099
- Subject:
- NM_001039481.2
- Aligned Length:
- 1367
- Identities:
- 481
- Gaps:
- 871
Alignment
Query 1 ATGCTCTGCGGCCGCCCGCGGTCCAGCTCCGACAACAGGAATTTTCTCCGAGAGCGGGCCGGGCTCAGTTCAGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGCTGTCCAGACCCGGATCGGCAACAGTGCCGCCTCCAGACGTTCTCCTGCCGCTCGCCCGCCCGTCCCAGCGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCCCAGCCCTCCCGCGAGGGCGCCCCGGGACGGAAGGATCCACCAGTCTGTCGGCGCCCGCCGTTCTCGTGGTC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCCGTCGCCGTCGTCGTGGTGGTAGTCTCCGCCGTCGCCTGGGCCATGGCCAATTACATCCACGTCCCTCCCGG 296
|||||||||||||||||||||||||||||
Sbjct 1 ---------------------------------------------ATGGCCAATTACATCCACGTCCCTCCCGG 29
Query 297 CTCCCCGGAGGTGCCCAAGCTGAACGTCACCGTTCAGGATCAGGAGGAGCATCGCTGCCGGGAGGGGGCCCTGA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 30 CTCCCCGGAGGTGCCCAAGCTGAACGTCACCGTTCAGGATCAGGAGGAGCATCGCTGCCGGGAGGGGGCCCTGA 103
Query 371 GCCTCCTGCAACACCTGCGGCCTCACTGGGACCCCCAGGAGGTGACCCTGCAGCTCTTCACAGATGGAATCACA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 104 GCCTCCTGCAACACCTGCGGCCTCACTGGGACCCCCAGGAGGTGACCCTGCAGCTCTTCACAGATGGAATCACA 177
Query 445 AATAAACTTATTGGCTGTTACGTGGGAAACACCATGGAGGATGTAGTCCTGGTGAGAATTTATGGCAATAAGAC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 178 AATAAACTTATTGGCTGTTACGTGGGAAACACCATGGAGGATGTAGTCCTGGTGAGAATTTATGGCAATAAGAC 251
Query 519 TGAGTTATTAGTCGATCGAGATGAGGAAGTAAAGAGTTTTCGAGTGTTGCAGGCTCATGGGTGTGCACCACAAC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 252 TGAGTTATTAGTCGATCGAGATGAGGAAGTAAAGAGTTTTCGAGTGTTGCAGGCTCATGGGTGTGCACCACAAC 325
Query 593 TCTACTGTACCTTCAATAATGGACTATGCTATGAATTTATACAAGGAGAAGCACTGGATCCAAAGCATGTCTGC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 326 TCTACTGTACCTTCAATAATGGACTATGCTATGAATTTATACAAGGAGAAGCACTGGATCCAAAGCATGTCTGC 399
Query 667 AACCCAGCCATTTTCAGGCTAATAGCTCGTCAGC-TTGCTAAAATCCATGCTATTCATGCACACAATGGCTGGA 739
|||||||||||||||||..|| |||.| ||| .||.|| ||||.| |||
Sbjct 400 AACCCAGCCATTTTCAGTTTA--------TCATCGTTG-----------ACTCTT--TGCAAA--------GGA 444
Query 740 TCCCCAAATCTAATCTTTGGCTAAAGATGGGAAAGTATTTCTCTCTCATTCCCACAGGATT-------TGCAGA 806
|||.||| .|||||| ||| .||||| ||||||
Sbjct 445 -----AAAACTA----------CAAGATG--------TTT---------------TGGATTAACCGGCTGCAGA 480
Query 807 TGAAGACATTAATAAAAGG-TTC--CTAAGTGATATCCCAAGCTCTCAGATTCTCCAGGAAGAGATGACTTGGA 877
.| |.| |||| ||| ||.|||..|.||
Sbjct 481 GG--GTC--------AAGGCTTCTGCTTAGTTTTTTC------------------------------------- 507
Query 878 TGAAGGAGATTCTTTCCAACCTGGGCTCACCTGTTGTGCTTTGCCATAATGACCTATTGTGTAAGAATATAATC 951
Sbjct 508 -------------------------------------------------------------------------- 507
Query 952 TACAATGAGAAACAAGGTGATGTACAGTTCATTGATTATGAATATTCTGGATACAACTACCTGGCATATGATAT 1025
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1026 TGGAAATCATTTCAATGAATTTGCAGGTGTGAGTGATGTAGACTATAGTCTGTATCCAGATAGAGAACTACAGA 1099
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1100 GTCAGTGGCTGCGTGCTTACCTTGAAGCCTACAAAGAATTTAAGGGCTTTGGGACTGAAGTTACTGAAAAGGAG 1173
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1174 GTAGAAATACTCTTCATTCAAGTCAATCAGTTTGCATTGGCTTCTCATTTCTTTTGGGGATTGTGGGCTTTGAT 1247
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1248 TCAAGCCAAATACTCCACTATTGAGTTTGATTTCCTTGGGTATGCAATTGTTCGTTTTAACCAGTACTTTAAAA 1321
Sbjct 508 -------------------------------------------------------------------------- 507
Query 1322 TGAAGCCTGAGGTTACTGCATTAAAAGTGCCTGAG 1356
Sbjct 508 ----------------------------------- 507
