Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15099
• Subject: XM_005253420.4
• Aligned Length: 1376
• Identities: 779
• Gaps: 577

Alignment

Query    1  ATGCTCTGCGGCCGCCCGCGGTCCAGCTCCGACAACAGGAATTTTCTCCGAGAGCGGGCCGGGCTCAGTTCAGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTCTGCGGCCGCCCGCGGTCCAGCTCCGACAACAGGAATTTTCTCCGAGAGCGGGCCGGGCTCAGTTCAGC  74

Query   75  TGCTGTCCAGACCCGGATCGGCAACAGTGCCGCCTCCAGACGTTCTCCTGCCGCTCGCCCGCCCGTCCCAGCGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGCTGTCCAGACCCGGATCGGCAACAGTGCCGCCTCCAGACGTTCTCCTGCCGCTCGCCCGCCCGTCCCAGCGC  148

Query  149  CCCCAGCCCTCCCGCGAGGGCGCCCCGGGACGGAAGGATCCACCAGTCTGTCGGCGCCCGCCGTTCTCGTGGTC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCCCAGCCCTCCCGCGAGGGCGCCCCGGGACGGAAGGATCCACCAGTCTGTCGGCGCCCGCCGTTCTCGTGGTC  222

Query  223  GCCGTCGCCGTCGTCGTGGTGGTAGTCTCCGCCGTCGCCTGGGCCATGGCCAATTACATCCACGTCCCTCCCGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCGTCGCCGTCGTCGTGGTGGTAGTCTCCGCCGTCGCCTGGGCCATGGCCAATTACATCCACGTCCCTCCCGG  296

Query  297  CTCCCCGGAGGTGCCCAAGCTGAACGTCACCGTTCAGGATCAGGAGGAGCATCGCTGCCGGGAGGGGGCCCTGA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTCCCCGGAGGTGCCCAAGCTGAACGTCACCGTTCAGGATCAGGAGGAGCATCGCTGCCGGGAGGGGGCCCTGA  370

Query  371  GCCTCCTGCAACACCTGCGGCCTCACTGGGACCCCCAGGAGGTGACCCTGCAGCTCTTCACAGATGGAATCACA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCCTCCTGCAACACCTGCGGCCTCACTGGGACCCCCAGGAGGTGACCCTGCAGCTCTTCACAGATGGAATCACA  444

Query  445  AATAAACTTATTGGCTGTTACGTGGGAAACACCATGGAGGATGTAGTCCTGGTGAGAATTTATGGCAATAAGAC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AATAAACTTATTGGCTGTTACGTGGGAAACACCATGGAGGATGTAGTCCTGGTGAGAATTTATGGCAATAAGAC  518

Query  519  TGAGTTATTAGTCGATCGAGATGAGGAAGTAAAGAGTTTTCGAGTGTTGCAGGCTCATGGGTGTGCACCACAAC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGAGTTATTAGTCGATCGAGATGAGGAAGTAAAGAGTTTTCGAGTGTTGCAGGCTCATGGGTGTGCACCACAAC  592

Query  593  TCTACTGTACCTTCAATAATGGACTATGCTATGAATTTATACAAGGAGAAGCACTGGATCCAAAGCATGTCTGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTACTGTACCTTCAATAATGGACTATGCTATGAATTTATACAAGGAGAAGCACTGGATCCAAAGCATGTCTGC  666

Query  667  AACCCAGCCATTTTCAGGCTAATAGCTCGTCAGCTTGCTAAAATCCATGCTATTCATGCACACAATGGCTGGAT  740
            |||||||||||||||||           .||||      ||.|              |||.| ||.||||    
Sbjct  667  AACCCAGCCATTTTCAG-----------ATCAG------AAGA--------------GCAGA-AACGGCT----  704

Query  741  CCCCAAATCTAATCTTTGGCTAAAGA-------TGGGAAAGTATTTCTCTCTCATTCCCACAGGATTTGCAGAT  807
                     ||.|     .|||||||       |||.|||            ||||.|||              
Sbjct  705  ---------TAGT-----TCTAAAGAGACTGTTTGGAAAA------------CATTTCCA--------------  738

Query  808  GAAGACATTAATAAAAGGTTCCTAAGTGATATCCCAAGCTCTCAGATTCTCCAGGAAGAGATGACTTGGATGAA  881
                     |||||                                  ||.|||        .|||||||||| 
Sbjct  739  ---------AATAA----------------------------------CTGCAG--------CACTTGGATGA-  760

Query  882  GGAGATTCT--TTCCAACCTGGGCTCACCTGTTGTGCTTTGCCATAATGACCTATTGTGTAAGAATATAATCTA  953
                   ||  |||   ||||        .|||.||||      ||.|.||      ||.|||.|   .|.|||
Sbjct  761  -------CTACTTC---CCTG--------AGTTTTGCT------TATTCAC------TGAAAGCA---GAACTA  801

Query  954  CAATG-----------AGAAACAAGGTGATGTACAGTTCATTGATTATGAATATTCTGGATACAACTACCTGGC  1016
            |..||           ||                                                        
Sbjct  802  CTGTGCCGAGCCCTCCAG--------------------------------------------------------  819

Query 1017  ATATGATATTGGAAATCATTTCAATGAATTTGCAGGTGTGAGTGATGTAGACTATAGTCTGTATCCAGATAGAG  1090
                                                                                      
Sbjct  820  --------------------------------------------------------------------------  819

Query 1091  AACTACAGAGTCAGTGGCTGCGTGCTTACCTTGAAGCCTACAAAGAATTTAAGGGCTTTGGGACTGAAGTTACT  1164
                                                                                      
Sbjct  820  --------------------------------------------------------------------------  819

Query 1165  GAAAAGGAGGTAGAAATACTCTTCATTCAAGTCAATCAGTTTGCATTGGCTTCTCATTTCTTTTGGGGATTGTG  1238
                                                                                      
Sbjct  820  --------------------------------------------------------------------------  819

Query 1239  GGCTTTGATTCAAGCCAAATACTCCACTATTGAGTTTGATTTCCTTGGGTATGCAATTGTTCGTTTTAACCAGT  1312
                                                                                      
Sbjct  820  --------------------------------------------------------------------------  819

Query 1313  ACTTTAAAATGAAGCCTGAGGTTACTGCATTAAAAGTGCCTGAG  1356
                                                        
Sbjct  820  --------------------------------------------  819