Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15118
- Subject:
- NM_001290374.1
- Aligned Length:
- 1155
- Identities:
- 917
- Gaps:
- 144
Alignment
Query 1 ATGGCCCGGGAGAACGGCGAGAGCAGCTCCTCCTGGAAAAAGCAAGCTGAAGACATCAAGAAGATCTTCGAGTT 74
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||||
Sbjct 1 ATGGCCCGGGAGAACGGCGAGAGCAGCTCCTCCTGGAAAAAGCAAGCAGAAGACATTAAGAAGATCTTCGAGTT 74
Query 75 CAAAGAGACCCTCGGAACCGGGGCCTTTTCCGAAGTGGTTTTAGCTGAAGAGAAGGCAACTGGCAAGCTCTTTG 148
|||.||||||||||||||.|||||||||||.|||||.||||||||.||.|||||.||.|||||.||||||||.|
Sbjct 75 CAAGGAGACCCTCGGAACTGGGGCCTTTTCTGAAGTTGTTTTAGCCGAGGAGAAAGCTACTGGGAAGCTCTTCG 148
Query 149 CTGTGAAGTGTATCCCTAAGAAGGCGCTGAAGGGCAAGGAAAGCAGCATAGAGAATGAGATAGCCGTCCTGAGA 222
|.||||||||.|||||.|||||||||||||||||||||||.||||||||.|||||.|||||.|||||.||.|||
Sbjct 149 CAGTGAAGTGCATCCCGAAGAAGGCGCTGAAGGGCAAGGAGAGCAGCATCGAGAACGAGATTGCCGTGCTTAGA 222
Query 223 AAGATTAAGCATGAAAATATTGTTGCCCTGGAAGACATTTATGAAAGCCCAAATCACCTGTACTTGGTCATGCA 296
||
Sbjct 223 AA------------------------------------------------------------------------ 224
Query 297 GCTGGTGTCCGGTGGAGAGCTGTTTGACCGGATAGTGGAGAAGGGGTTTTATACAGAGAAGGATGCCAGCACTC 370
.|||||.||||||||.||.||.||.|||||||||||||||||||||||.||||||||.|||||||||||||
Sbjct 225 ---TGTGTCTGGTGGAGAACTCTTCGATCGGATAGTGGAGAAGGGGTTTTACACAGAGAAAGATGCCAGCACTC 295
Query 371 TGATCCGCCAAGTCTTGGACGCCGTGTACTATCTCCACAGAATGGGCATCGTCCACAGAGACCTCAAGCCCGAA 444
|.||||||||.|||.||||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||.||.
Sbjct 296 TCATCCGCCAGGTCCTGGATGCCGTATACTATCTCCACAGAATGGGCATTGTCCACAGGGACCTCAAGCCGGAG 369
Query 445 AATCTCTTGTACTACAGTCAAGATGAGGAGTCCAAAATAATGATCAGTGACTTTGGATTGTCAAAAATGGAGGG 518
||||||||.||||||||||||||.||||||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 370 AATCTCTTATACTACAGTCAAGACGAGGAGTCCAAAATAATGATCAGTGACTTTGGCTTGTCGAAAATGGAGGG 443
Query 519 CAAAGGAGATGTGATGTCCACTGCCTGTGGAACTCCAGGCTATGTCGCTCCTGAAGTCCTCGCCCAGAAACCTT 592
|||||||||||||||||||||.|||||.||.||.|||||||||||.|||||.|||||.||||||||||||||.|
Sbjct 444 CAAAGGAGATGTGATGTCCACGGCCTGCGGGACCCCAGGCTATGTTGCTCCGGAAGTTCTCGCCCAGAAACCGT 517
Query 593 ACAGCAAAGCCGTTGACTGCTGGTCCATCGGAGTGATTGCCTACATCTTGCTCTGCGGCTACCCTCCTTTTTAT 666
||||||||||.||.|||||||||||||||||.|||||.|||||.|||||||||||.||.|||||||||||||||
Sbjct 518 ACAGCAAAGCTGTGGACTGCTGGTCCATCGGGGTGATCGCCTATATCTTGCTCTGTGGTTACCCTCCTTTTTAT 591
Query 667 GATGAAAATGACTCCAAGCTCTTTGAGCAGATCCTCAAGGCGGAATATGAGTTTGACTCTCCCTACTGGGATGA 740
||||||||||||||.|||||.|||||.||||||||||||||.||||||||||||||.||.||||||||||||||
Sbjct 592 GATGAAAATGACTCGAAGCTGTTTGAACAGATCCTCAAGGCAGAATATGAGTTTGATTCCCCCTACTGGGATGA 665
Query 741 CATCTCCGACTCTGCAAAAGACTTCATTCGGAACCTGATGGAGAAGGACCCGAATAAAAGATACACGTGTGAGC 814
|||||||||||||||.|||||||||||||||||.|||||||||||.|||||.||||||||||||||.|||||||
Sbjct 666 CATCTCCGACTCTGCCAAAGACTTCATTCGGAATCTGATGGAGAAAGACCCAAATAAAAGATACACTTGTGAGC 739
Query 815 AGGCAGCTCGGCACCCATGGATCGCTGGTGACACAGCCCTCAACAAAAACATCCACGAGTCCGTCAGCGCCCAG 888
||||||||||.|||||||||||.|||||||||||||||||.|.|||||||||.|||||.||.|||||.||||||
Sbjct 740 AGGCAGCTCGACACCCATGGATTGCTGGTGACACAGCCCTTAGCAAAAACATTCACGAATCTGTCAGTGCCCAG 813
Query 889 ATCCGGAAAAACTTTGCCAAGAGCAAATGGAGACAAGCATTTAATGCCACGGCCGTCGTGAGACATATGAGAAA 962
||||||||.||.|||||.||||||||||||||||||||.|||||.||||||||.|||||||||||||||.|.|.
Sbjct 814 ATCCGGAAGAATTTTGCAAAGAGCAAATGGAGACAAGCGTTTAACGCCACGGCAGTCGTGAGACATATGCGGAG 887
Query 963 ACTACACCTCGGCAGCAGCCTGGACAGTTCAAATGCAAGTGTTTCGAGCAGCCTCAGTTTGGCCAGCCAAAAAG 1036
.||.||.||.|||||||||||||||||||||||
Sbjct 888 GCTCCAGCTTGGCAGCAGCCTGGACAGTTCAAA----------------------------------------- 920
Query 1037 ACTGTCTGGCACCTTCCACGCTCTGTAGTTTCATTTCTTCTTCGTCGGGGGTCTCAGGAGTTGGAGCCGAGCGG 1110
||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||.|||||.|||.||
Sbjct 921 --TGTCTGGCACCTTCCACGCTCTGTAGTTTCCTTTCTTCTTCGTCGGGGGTCGCAGGAGTCGGAGCTGAGAGG 992
Query 1111 AGACCCAGGCCCACCACTGTGACGGCAGTGCACTCTGGAAGCAAG 1155
|||||||||||||||||||
Sbjct 993 AGACCCAGGCCCACCACTG-------------------------- 1011