Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15129
- Subject:
- NM_001172684.1
- Aligned Length:
- 1447
- Identities:
- 1007
- Gaps:
- 428
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCCGCGGCGCCGGGAGGGTCAGCGCAGCCCGCTGGCCCCGGCCCGCGCCTGGGTTTCAGCACCGCGGACAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCGTCGGCATGAGCGGGCTAAACCCCGGTCCCGCCGTACCCATGAAGGACCACGACGCCATCAAGCTCTTCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGGGCAGATCCCGCGGGGCTTGGACGAGCAGGACCTCAAGCCGCTGTTCGAGGAGTTCGGCCGCATCTACGAG 222
Query 1 -------------ATGA---TCTCAGATCCCCCCTCAAACAACAGCT------------------------GGA 34
|.|| .|||| ||..|||| .||||..||| ||.
Sbjct 223 CTGACGGTGCTGAAGGACCGGCTCA---CCGGCCTC-CACAAAGGCTGTGCCTTCCTCACCTACTGCGCCCGGG 292
Query 35 ACTCTGTTCTC---------------------------------------------TATCTTC----------- 52
||||||.|||| .|||.||
Sbjct 293 ACTCTGCTCTCAAGGCCCAGAGTGCACTGCACGAGCAGAAGACCCTGCCAGGGATGAATCGTCCGATCCAAGTG 366
Query 53 -------------------------TAGAGGACCGAAAGCTGTTTGTGGGGATGCTGGGCAAGCAGCAGGGTGA 101
.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 AAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGACCGAAAGCTGTTTGTGGGGATGCTGGGCAAGCAGCAGGGTGA 440
Query 102 GGAGGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACATCGAGGAGTGCACGGTCCTGCGGAGTCCTGACGGCA 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441 GGAGGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACATCGAGGAGTGCACGGTCCTGCGGAGTCCTGACGGCA 514
Query 176 CCAGTAAAGGCTGTGCCTTTGTGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACGGC 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 515 CCAGTAAAGGCTGTGCCTTTGTGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACGGC 588
Query 250 AGCCGGACCATGGCGGGCGCCTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGACCGGGAGCGCGCGCTGCG 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 589 AGCCGGACCATGGCGGGCGCCTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGACCGGGAGCGCGCGCTGCG 662
Query 324 GCGGATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCACCCCGCGCCACTGCCGCTAGGGGCCTGCGGCGCCT 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 GCGGATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCACCCCGCGCCACTGCCGCTAGGGGCCTGCGGCGCCT 736
Query 398 ACACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGCGGCGGCACAGGGCCCAGGCCTAGGCCCGGTGGCG 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 737 ACACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGCGGCGGCACAGGGCCCAGGCCTAGGCCCGGTGGCG 810
Query 472 GCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTTTAGCCTGGTAGCTGCGCCTCTGTTGCCCGCGGCAGCAGC 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 GCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTTTAGCCTGGTAGCTGCGCCTCTGTTGCCCGCGGCAGCAGC 884
Query 546 CAACTCCCCGCCTGGCAGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCCATCGGGGTCAATGGATTCGGCC 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 CAACTCCCCGCCTGGCAGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCCATCGGGGTCAATGGATTCGGCC 958
Query 620 CTCTGACCCCCCAGACCAATGGCCAGCCGGGCTCCGACACGCTCTACAATAACGGGCTCTCCCCTTATCCAGCC 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 CTCTGACCCCCCAGACCAATGGCCAGCCGGGCTCCGACACGCTCTACAATAACGGGCTCTCCCCTTATCCAGCC 1032
Query 694 CAGAGCCCCGGCGTGGCTGACCCCCTGCAGCAGGCCTACGCTGGGATGCACCACTACGCAGCAGCCTATCCGTC 767
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 CAGAGCCCCGGCGTGGCTGACCCCCTGCAGCAGGCCTACGCTGGGATGCACCACTACGC--------------- 1091
Query 768 GGCCTATGCCCCAGTGAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCCCG 841
||||||||
Sbjct 1092 ------------------------------------------------------------------AGGCCCCG 1099
Query 842 AAGGCTGTAACCTCTTCATCTATCACCTGCCTCAGGAGTTTGGTGATGCGGAACTCATACAGACATTCCTGCCC 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100 AAGGCTGTAACCTCTTCATCTATCACCTGCCTCAGGAGTTTGGTGATGCGGAACTCATACAGACATTCCTGCCC 1173
Query 916 TTTGGAGCCGTTGTCTCTGCTAAAGTCTTTGTGGATCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTGTTAG 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 TTTGGAGCCGTTGTCTCTGCTAAAGTCTTTGTGGATCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTGTTAG 1247
Query 990 TTTTGACAATCCAACTAGTGCCCAGACTGCTATTCAGGCGATGAATGGCTTTCAAATTGGCATGAAGAGGCTCA 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248 TTTTGACAATCCAACTAGTGCCCAGACTGCTATTCAGGCGATGAATGGCTTTCAAATTGGCATGAAGAGGCTCA 1321
Query 1064 AGGTCCAGCTAAAGCGGCCCAAGGATGCCAACCGGCCTTAC 1104
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1322 AGGTCCAGCTAAAGCGGCCCAAGGATGCCAACCGGCCTTAC 1362