Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15129
• Subject: NM_052840.5
• Aligned Length: 1447
• Identities: 1088
• Gaps: 347

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCCGCGGCGCCGGGAGGGTCAGCGCAGCCCGCTGGCCCCGGCCCGCGCCTGGGTTTCAGCACCGCGGACAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGCGTCGGCATGAGCGGGCTAAACCCCGGTCCCGCCGTACCCATGAAGGACCACGACGCCATCAAGCTCTTCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGGGCAGATCCCGCGGGGCTTGGACGAGCAGGACCTCAAGCCGCTGTTCGAGGAGTTCGGCCGCATCTACGAG  222

Query    1  -------------ATGA---TCTCAGATCCCCCCTCAAACAACAGCT------------------------GGA  34
                         |.||   .||||   ||..|||| .||||..|||                        ||.
Sbjct  223  CTGACGGTGCTGAAGGACCGGCTCA---CCGGCCTC-CACAAAGGCTGTGCCTTCCTCACCTACTGCGCCCGGG  292

Query   35  ACTCTGTTCTC---------------------------------------------TATCTTC-----------  52
            ||||||.||||                                             .|||.||           
Sbjct  293  ACTCTGCTCTCAAGGCCCAGAGTGCACTGCACGAGCAGAAGACCCTGCCAGGGATGAATCGTCCGATCCAAGTG  366

Query   53  -------------------------TAGAGGACCGAAAGCTGTTTGTGGGGATGCTGGGCAAGCAGCAGGGTGA  101
                                     .||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  367  AAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGACCGAAAGCTGTTTGTGGGGATGCTGGGCAAGCAGCAGGGTGA  440

Query  102  GGAGGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACATCGAGGAGTGCACGGTCCTGCGGAGTCCTGACGGCA  175
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  441  GGAGGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACATCGAGGAGTGCACGGTCCTGCGGAGTCCTGACGGCA  514

Query  176  CCAGTAAAGGCTGTGCCTTTGTGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACGGC  249
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  515  CCAGTAAAGGCTGTGCCTTTGTGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACGGC  588

Query  250  AGCCGGACCATGGCGGGCGCCTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGACCGGGAGCGCGCGCTGCG  323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  589  AGCCGGACCATGGCGGGCGCCTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGACCGGGAGCGCGCGCTGCG  662

Query  324  GCGGATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCACCCCGCGCCACTGCCGCTAGGGGCCTGCGGCGCCT  397
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  663  GCGGATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCACCCCGCGCCACTGCCGCTAGGGGCCTGCGGCGCCT  736

Query  398  ACACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGCGGCGGCACAGGGCCCAGGCCTAGGCCCGGTGGCG  471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  737  ACACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGCGGCGGCACAGGGCCCAGGCCTAGGCCCGGTGGCG  810

Query  472  GCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTTTAGCCTGGTAGCTGCGCCTCTGTTGCCCGCGGCAGCAGC  545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  811  GCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTTTAGCCTGGTAGCTGCGCCTCTGTTGCCCGCGGCAGCAGC  884

Query  546  CAACTCCCCGCCTGGCAGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCCATCGGGGTCAATGGATTCGGCC  619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  885  CAACTCCCCGCCTGGCAGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCCATCGGGGTCAATGGATTCGGCC  958

Query  620  CTCTGACCCCCCAGACCAATGGCCAGCCGGGCTCCGACACGCTCTACAATAACGGGCTCTCCCCTTATCCAGCC  693
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  CTCTGACCCCCCAGACCAATGGCCAGCCGGGCTCCGACACGCTCTACAATAACGGGCTCTCCCCTTATCCAGCC  1032

Query  694  CAGAGCCCCGGCGTGGCTGACCCCCTGCAGCAGGCCTACGCTGGGATGCACCACTACGCAGCAGCCTATCCGTC  767
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033  CAGAGCCCCGGCGTGGCTGACCCCCTGCAGCAGGCCTACGCTGGGATGCACCACTACGCAGCAGCCTATCCGTC  1106

Query  768  GGCCTATGCCCCAGTGAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCCCG  841
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107  GGCCTATGCCCCAGTGAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCCCG  1180

Query  842  AAGGCTGTAACCTCTTCATCTATCACCTGCCTCAGGAGTTTGGTGATGCGGAACTCATACAGACATTCCTGCCC  915
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181  AAGGCTGTAACCTCTTCATCTATCACCTGCCTCAGGAGTTTGGTGATGCGGAACTCATACAGACATTCCTGCCC  1254

Query  916  TTTGGAGCCGTTGTCTCTGCTAAAGTCTTTGTGGATCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTGTTAG  989
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255  TTTGGAGCCGTTGTCTCTGCTAAAGTCTTTGTGGATCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTGTTAG  1328

Query  990  TTTTGACAATCCAACTAGTGCCCAGACTGCTATTCAGGCGATGAATGGCTTTCAAATTGGCATGAAGAGGCTCA  1063
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329  TTTTGACAATCCAACTAGTGCCCAGACTGCTATTCAGGCGATGAATGGCTTTCAAATTGGCATGAAGAGGCTCA  1402

Query 1064  AGGTCCAGCTAAAGCGGCCCAAGGATGCCAACCGGCCTTAC  1104
            |||||||||||||||||||||||||||||||||||||||||
Sbjct 1403  AGGTCCAGCTAAAGCGGCCCAAGGATGCCAACCGGCCTTAC  1443