Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15154
• Subject: XM_011538747.2
• Aligned Length: 1274
• Identities: 721
• Gaps: 536

Alignment

Query    1  ATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGC  74

Query   75  CTCCAAGACCAAGAAGAAGCATTTCGTGCAGCAGAAGGTGAAGGTGTTCCGGGCGGCCGACCCGCTGGTGGGTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CTCCAAGACCAAGAAGAAGCATTTCGTGCAGCAGAAGGTGAAGGTGTTCCGGGCGGCCGACCCGCTGGTGGGTG  148

Query  149  TGTTCCTGTGGGGCGTAGCCCACTCGATCAATGAGCTCAGCCAGGTGCCTCCCCCGGTGATGCTGCTGCCAGAT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGTTCCTGTGGGGCGTAGCCCACTCGATCAATGAGCTCAGCCAGGTGCCTCCCCCGGTGATGCTGCTGCCAGAT  222

Query  223  GACTTTAAGGCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAATCTGCCCAGTCATTTCAA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACTTTAAGGCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAATCTGCCCAGTCATTTCAA  296

Query  297  GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCTCCGTGATCGATTTGGCATTGATGACCAAGATTACTTGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCTCCGTGATCGATTTGGCATTGATGACCAAGATTACTTGG  370

Query  371  TGTCCCTTACCCGAAACCCCCCCAGCGAAAGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGTCCCTTACCCGAAACCCCCCCAGCGAAAGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACT  444

Query  445  CTGGTCATCAAAGAAGTATCCAGTGAGNACATTGNTGACATNCATAGCAACNTNNCCAACTATCACCAGTACAT  518
            |||||||||||||||||||||||||||.||||||.||||||.|||||||||.|..|||||||||||||||||||
Sbjct  445  CTGGTCATCAAAGAAGTATCCAGTGAGGACATTGCTGACATGCATAGCAACCTCTCCAACTATCACCAGTACAT  518

Query  519  TGTGAAGTGCCATGGCAACACGCNTNTGCCCCAGTTCNTGGGGATGTACCGAGTCAGTGTGGACAACGAAGACA  592
            |||||||||||||||||||||||.|.|||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct  519  TGTGAAGTGCCATGGCAACACGCTTCTGCCCCAGTTCCTGGGGATGTACCGAGTCAGTGTGGACAACGAAGACA  592

Query  593  GCTACATGCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGACCTCAAGGGTTCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GCTACATGCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGACCTCAAGGGTTCC  666

Query  667  CTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAANGATATGGACTTT--CTC  738
            |||||||||||||||||||||||||||||||||.|                             |||||  ||.
Sbjct  667  CTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGCT-----------------------------ACTTTTGCTT  711

Query  739  AACAAGAACCAG-------AAAGTATATATTGGTGANNNGNAGAAGAAAATATTTCTGGAGAAGCTGAAGAAGN  805
            ||.||||..|||       |          |||||                            |||.|.|    
Sbjct  712  AAGAAGACACAGGCCGGGCA----------TGGTG----------------------------GCTTATG----  743

Query  806  NGATGTGGAGTTTCTAGTGCAGCTGAAGATCATGGACTACAGCCTTCTGCTAGGCATCCACGACATCATTCGGG  879
             .|||                                                                     
Sbjct  744  -CATG---------------------------------------------------------------------  747

Query  880  GCTCTGAACCAGAGGAGGAAGCGCCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGACTGCAGCCTGACTGGA  953
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query  954  CCTCCTGCTCTGGTGGGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGCTACATCCATTCCCATCGGCCCCT  1027
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1028  GGGCCCAGGAGAGTTTGAGTCCTTCATTGATGTCTATGCCATCCGGAGTGCTGAAGGAGCCCCCCAGAAGGAGG  1101
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1102  TCTACTTCATGGGCCTCATTGATATCCTTACACAGTATGATGCCAAGAAGAAAGCAGCTCATGCAGCCAAAACT  1175
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1176  GTCAAGCATGGGGCTGGGGCAGAGATCTCTACTGTCCATCCGGAGCAGTATGCTAAGCGATTCCTGGATTTTAT  1249
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1250  TACCAACATCTTTGCC  1265
                            
Sbjct  748  ----------------  747