Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15154
Subject:
XM_017313768.1
Aligned Length:
1272
Identities:
1129
Gaps:
16

Alignment

Query    1  ATGGCGTCCTCCTCGGTCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGC  74
            ||||||||||||||.|||||.||.|||||.|.|.|.|||||..|.|.||||||||||||.||.|||||||||||
Sbjct    1  ATGGCGTCCTCCTCCGTCCCTCCCGCCACCGCACCCGCGGCAGCTGGAGGCCCCGGCCCGGGATTCGGCTTCGC  74

Query   75  CTCCAAGACCAAGAAGAAGCATTTCGTGCAGCAGAAGGTGAAGGTGTTCCGGGCGGCCGACCCGCTGGTGGGTG  148
            ||||||.||||||||||||||||||||.||||||||.|||||||||||||||||.||.||||||||||||||.|
Sbjct   75  CTCCAAAACCAAGAAGAAGCATTTCGTACAGCAGAAAGTGAAGGTGTTCCGGGCCGCGGACCCGCTGGTGGGCG  148

Query  149  TGTTCCTGTGGGGCGTAGCCCACTCGATCAATGAGCTCAGCCAGGTGCCTCCCCCGGTGATGCTGCTGCCAGAT  222
            ||||||||||||||||.||.||||||||||||||||||||||||||.||.|||||.||||||.|||||||||||
Sbjct  149  TGTTCCTGTGGGGCGTCGCTCACTCGATCAATGAGCTCAGCCAGGTACCGCCCCCAGTGATGTTGCTGCCAGAT  222

Query  223  GACTTTAAGGCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAATCTGCCCAGTCATTTCAA  296
            ||||||||.||||||||||||||||||||||||||||||.|||||||.||.||||||||.||||||||||||||
Sbjct  223  GACTTTAAAGCCAGCTCCAAGATCAAGGTCAACAATCACTTTTTCCATAGAGAAAATCTTCCCAGTCATTTCAA  296

Query  297  GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCTCCGTGATCGATTTGGCATTGATGACCAAGATTACTTGG  370
            ||||||||||||||||||||||||||||||||||||..|.|||||.||||.|||.|||||.||.||||||||||
Sbjct  297  GTTCAAGGAGTATTGTCCCCAGGTCTTCAGGAACCTGAGAGATCGGTTTGCCATCGATGATCACGATTACTTGG  370

Query  371  TGTCCCTTACCCGAAACCCCCCCAGCGAAAGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACT  444
            ||||||||||.||||.||||||.|||||||.|||||||||||||||.||.||||||||||||||.||.||.|||
Sbjct  371  TGTCCCTTACTCGAAGCCCCCCAAGCGAAACTGAAGGCAGTGATGGCCGTTTCCTTATCTCCTATGACCGCACT  444

Query  445  CTGGTCATCAAAGAAGTATCCAGTGAGNACATTGNTGACATNCATAGCAACNTNNCCAACTATCACCAGTACAT  518
            |||||||||||.|||||.||.||.||..|.||||..||.||.||.||||||.|..|||||||.|||||||||||
Sbjct  445  CTGGTCATCAAGGAAGTGTCGAGCGAAGATATTGCGGATATGCACAGCAACCTCTCCAACTACCACCAGTACAT  518

Query  519  TGTGAAGTGCCATGGCAACACGCNTNTGCCCCAGTTCNTGGGGATGTACCGAGTCAGTGTGGACAACGAAGACA  592
            .|||||.||.|||||||||||||.|.|||||||||||.||||.|||||||||||||||||.||.||.|||||||
Sbjct  519  AGTGAAATGTCATGGCAACACGCTTCTGCCCCAGTTCCTGGGCATGTACCGAGTCAGTGTAGAAAATGAAGACA  592

Query  593  GCTACATGCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGACCTCAAGGGTTCC  666
            ||||||||||.||||||||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||.
Sbjct  593  GCTACATGCTCGTGATGCGCAATATGTTTAGTCATCGTCTTCCTGTGCATAGGAAGTATGACCTCAAGGGCTCT  666

Query  667  CTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAANGATATGGACTTTCTCAA  740
            ||||||||||||||||||||||||||||||||||||||||||.||||.||.||.||.||||||||||||||.||
Sbjct  667  CTAGTGTCCCGGGAAGCCAGCGATAAGGAAAAGGTTAAAGAACTGCCAACACTAAAGGATATGGACTTTCTTAA  740

Query  741  CAAGAACCAGAAAGTATATATTGGTGANNNGNAGAAGAAAA-----TATTTCTGGAGAAGCTGAA--GAAGNNG  807
            |||||||||||||||.|||||||||||     |||||||||     ||||.||||||||||||||  ||    |
Sbjct  741  CAAGAACCAGAAAGTGTATATTGGTGA-----AGAAGAAAAGAAAGTATTCCTGGAGAAGCTGAAGCGA----G  805

Query  808  ATGTGGAGTTTCTAGTGCAGCTGAAGATCATGGACTACAGCCTTCTGCTAGGCATCCACGACATCATTCGGGGC  881
            |||||||||||||||||||||||||||||||||||||||||||.|||.|.|||||||||||||||||.||||||
Sbjct  806  ATGTGGAGTTTCTAGTGCAGCTGAAGATCATGGACTACAGCCTCCTGTTGGGCATCCACGACATCATCCGGGGC  879

Query  882  TCTGAACCAGAGGAGGAAGCGCCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGACTGCAGCCTGACTGGACC  955
            ||||||||.|||||.||.|.|||.|||.|||||||.|||||.|||..||||||||||||.|.||||.|||||||
Sbjct  880  TCTGAACCCGAGGAAGAGGGGCCTGTGAGGGAGGAGGAGTCTGAGTGGGATGGGGACTGTAACCTGGCTGGACC  953

Query  956  TCCTGCTCTGGTGGGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGCTACATCCATTCCCATCGGCCCCTGG  1029
            |||.||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.|||||.||||
Sbjct  954  TCCCGCCCTGGTGGGCTCCTATGGTACCTCCCCTGAGGGTATCGGAGGCTACATCCATTCCCACCGGCCACTGG  1027

Query 1030  GCCCAGGAGAGTTTGAGTCCTTCATTGATGTCTATGCCATCCGGAGTGCTGAAGGAGCCCCCCAGAAGGAGGTC  1103
            |||||||||||||||||||||||||.|||||||||||.|||||||||||.||.||.|||||||||||||||||.
Sbjct 1028  GCCCAGGAGAGTTTGAGTCCTTCATCGATGTCTATGCTATCCGGAGTGCGGAGGGGGCCCCCCAGAAGGAGGTG  1101

Query 1104  TACTTCATGGGCCTCATTGATATCCTTACACAGTATGATGCCAAGAAGAAAGCAGCTCATGCAGCCAAAACTGT  1177
            ||.|||||||||||||||||.||.||.|||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1102  TATTTCATGGGCCTCATTGACATTCTGACACAGTATGATGCCAAGAAGAAAGCAGCTCATGCAGCCAAGACTGT  1175

Query 1178  CAAGCATGGGGCTGGGGCAGAGATCTCTACTGTCCATCCGGAGCAGTATGCTAAGCGATTCCTGGATTTTATTA  1251
            ||||||.|||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||.||||||.
Sbjct 1176  CAAGCACGGGGCGGGGGCAGAGATCTCCACTGTCCATCCTGAGCAGTATGCTAAGCGATTCCTGGACTTTATTG  1249

Query 1252  CCAACATCTTTGCC  1265
            ||||||||||||||
Sbjct 1250  CCAACATCTTTGCC  1263

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