Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15197
- Subject:
- XR_430213.4
- Aligned Length:
- 3173
- Identities:
- 1354
- Gaps:
- 1815
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCGGCCTGCAGCATCCGCCGGCCCGCACCTCAGACCCCCCCGGCGGGGGGAGGCGCAGGAAGCGGGGGGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAGAAACGGGCTGGGGAGGGGGGGCCCCGCAGCCCCCCTGGGCCATGCTGACTCCCGGGGCCTGACCCCCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCAGCCCCCCCTCCCCCAGCTCCGCGGCCCGCCGACTGGGGGGGGCCAGCCCAGCCCCCTGGGGACCCCCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGAGGTGGGGGGCAGCCGGGGGGGCCGGGACGGAGCGGTCGCCGGCCCCCACCGGAGAGACGGGGCGACGGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGGGGGGCGGCCGGGGGACCGGTCGGGCCGGGACCAAGGGCACCATGTCGTCCGGGGCCAAGGAGGGAGGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGGCTCTCCCGCCTACCACCTCCCCCACCCCCACCCCCACCCACCCCAGCACGCCCAATATGTGGGCCCCTAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGCTGGAGAAGACGCTGGGCAAAGGACAGACAGGGCTGGTTAAACTCGGGGTCCACTGCATCACGGGTCAGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTCGCCATCAAGATCGTGAACCGGGAGAAGCTGTCGGAGTCGGTGCTGATGAAGGTGGAGCGGGAGATCGCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCTGAAGCTCATCGAACACCCACATGTCCTCAAGCTCCACGACGTCTACGAGAACAAGAAATATTTGTACCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTCTGGAGCACGTCTCGGGGGGTGAGCTATTCGACTACCTGGTAAAGAAGGGGAGACTGACGCCCAAGGAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCGAAAGTTCTTCCGCCAGATTGTGTCTGCGCTGGACTTCTGCCACAGCTACTCCATCTGCCACAGAGACCTAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCCCGAGAACCTGCTTTTGGATGAGAAAAACAACATCCGCATTGCAGACTTCGGCATGGCGTCCCTGCAGGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGGACAGCCTCCTGGAGACCAGCTGCGGGTCCCCCCATTATGCGTGTCCAGAGGTGATTAAGGGGGAAAAATA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGATGGCCGCCGGGCAGACATGTGGAGCTGTGGAGTCATCCTCTTCGCCCTGCTCGTGGGGGCTCTGCCCTTTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGACGACAACCTCCGCCAGCTGCTGGAGAAGGTGAAACGGGGCGTCTTCCACATGCCCCACTTCATTCCTCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATTGCCAGAGCCTCCTGAGGGGAATGATCGAAGTGGAGCCCGAAAAAAGGCTCAGTCTGGAGCAAATTCAGAA 1184
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1185 ACATCCTTGGTACCTAGGCGGGAAACACGAGCCAGACCCGTGCCTGGAGCCAGCCCCTGGCCGCCGGGTAGCCA 1258
Query 2 TGCGGAGCCTGCCATCCAACGGAGAGCTGGACCCCGACGTCCTAGAGAGCATGGCATCACTGGGCTGCTTCAGG 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGCGGAGCCTGCCATCCAACGGAGAGCTGGACCCCGACGTCCTAGAGAGCATGGCATCACTGGGCTGCTTCAGG 1332
Query 76 GACCGCGAGAGGCTGCATCGCGAGCTGCGCAGTGAGGAGGAGAACCAAGAAAAGATGATATATTATCTGCTTTT 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GACCGCGAGAGGCTGCATCGCGAGCTGCGCAGTGAGGAGGAGAACCAAGAAAAGATGATATATTATCTGCTTTT 1406
Query 150 GGATCGGAAGGAGCGGTATCCCAGCTGTGAGGACCAGGACCTGCCTCCCCGGAATGATGTTGACCCCCCCCGGA 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGATCGGAAGGAGCGGTATCCCAGCTGTGAGGACCAGGACCTGCCTCCCCGGAATGATGTTGACCCCCCCCGGA 1480
Query 224 AGCGTGTGGATTCTCCCATGCTGAGTCGTCACGGGAAGCGGCGACCAGAGCGGAAGTCCATGGAAGTCCTGAGC 297
|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGCGTGTGGATTCTCCCATGCTGAGCCGTCACGGGAAGCGGCGACCAGAGCGGAAGTCCATGGAAGTCCTGAGC 1554
Query 298 ATCACCGATGCCGGGGGTGGTGGCTCCCCTGTACCCACACGACGGGCCTTGGAGATGGCCCAGCACAGCCAGAG 371
||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1555 ATCACCGATGCCGGGGGTGGTGGCTCCCCTGTACCCACCCGACGGGCCTTGGAGATGGCCCAGCACAGCCAGA- 1627
Query 372 ATCCCGTAGCGTCAGTGGAGCCTCCACGGGTCTGTCCTCCAGCCCTCTAAGCAGCCCAAGGAGTCCGGTCTTTT 445
||||||||||||||
Sbjct 1628 ------------------------------------------------------------GAGTCCGGTCTTTT 1641
Query 446 CCTTTTCACCGGAGCCGGGGGCTGGAGATGAGGCTCGAGGCGGGGGCTCCCCGACTTCCAAAACGCAGACGCTG 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1642 CCTTTTCACCGGAGCCGGGGGCTGGAGATGAGGCTCGAGGCGGGGGCTCCCCGACTTCCAAAACGCAGACGCTG 1715
Query 520 CCTTCTCGGGGCCCCAGGGGTGGGGGCGCCGGGGAGCAGCCCCCGCCCCCCAGTGCCCGCTCCACACCCCTGCC 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1716 CCTTCTCGGGGCCCCAGGGGTGGGGGCGCCGGGGAGCAGCCCCCGCCCCCCAGTGCCCGCTCCACACCCCTGCC 1789
Query 594 CGGCCCCCCAGGCTCCCCGCGCTCCTCTGGCGGGACCCCCTTGCACTCGCCTCTGCACACGCCCCGGGCCAGTC 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1790 CGGCCCCCCAGGCTCCCCGCGCTCCTCTGGCGGGACCCCCTTGCACTCGCCTCTGCACACGCCCCGGGCCAGTC 1863
Query 668 CCACCGGGACCCCGGGGACAACACCACCCCCCAGCCCCGGCGGTGGCGTCGGGGGAGCCGCCTGGAGGAGTCGT 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1864 CCACCGGGACCCCGGGGACAACACCACCCCCCAGCCCCGGCGGTGGCGTCGGGGGAGCCGCCTGGAGGAGTCGT 1937
Query 742 CTCAACTCCATCCGCAACAGCTTCCTGGGCTCCCCTCGCTTTCACCGGCGCAAGATGCAGGTCCCTACCGCTGA 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1938 CTCAACTCCATCCGCAACAGCTTCCTGGGCTCCCCTCGCTTTCACCGGCGCAAGATGCAGGTCCCTACCGCTGA 2011
Query 816 GGAGATGTCCAGCTTGACGCCAGAGTCCTCCCCGGAGCTGGCAAAACGCTCCTGGTTCGGGAACTTCATCTCCT 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2012 GGAGATGTCCAGCTTGACGCCAGAGTCCTCCCCGGAGCTGGCAAAACGCTCCTGGTTCGGGAACTTCATCTCCT 2085
Query 890 TGGACAAAGAAGAACAAATATTCCTCGTGCTAAAGGACAAACCTCTCAGCAGCATCAAAGCAGACATCGTCCAT 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2086 TGGACAAAGAAGAACAAATATTCCTCGTGCTAAAGGACAAACCTCTCAGCAGCATCAAAGCAGACATCGTCCAT 2159
Query 964 GCCTTTCTGTCGATCCCCAGCCTGAGTCACAGTGTGCTGTCACAGACCAGCTTCAGGGCCGAGTACAAAGCCAG 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 2160 GCCTTTCTGTCGATCCCCAGCCTGAGTCACAGTGTGCTGTCACAGACCAGCTTCAGGGCCGAGTACAAGGCCAG 2233
Query 1038 TGGCGGCCCCTCCGTCTTCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTCCTCTGAGGGTCCAGAGCCCT 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2234 TGGCGGCCCCTCCGTCTTCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTCCTCTGAGGGTCCAGAGCCCT 2307
Query 1112 CCCCGCGACGGGACGGCAGCGGAGGTGGTGGCATCTACTCCGTCACCTTCACTCTCATCTCGGGTCCCAGCCGT 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2308 CCCCGCGACGGGACGGCAGCGGAGGTGGTGGCATCTACTCCGTCACCTTCACTCTCATCTCGGGTCCCAGCCGT 2381
Query 1186 CGGTTCAAGCGAGTGGTGGAGACCATCCAGGCACAGCTCCTGAGCACTCATGACCAGCCCTCCGTGCAGGCCCT 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2382 CGGTTCAAGCGAGTGGTGGAGACCATCCAGGCACAGCTCCTGAGCACTCATGACCAGCCCTCCGTGCAGGCCCT 2455
Query 1260 GGCAGACGAGAAGAACGGGGCCCAGACCCGGCCTGCTGGTGCCCCACCCCGAAGCCTGCAGCCCCCACCCGGCC 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2456 GGCAGACGAGAAGAACGGGGCCCAGACCCGGCCTGCTGGTGCCCCACCCCGAAGCCTGCAGCCCCCACCCGGCC 2529
Query 1334 GCCCAGACCCAGAGCTGAGCAGCTCTCCCCGCCGAGCCCCCCCCAAGGACAAGAAGCTCCTGGCCACCAACGGG 1407
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 2530 GCCCAGACCCAGAGCTGAGCAGCTCTCCCCGCCGAGGCCCCCCCAAGGACAAGAAGCTCCTGGCCACCAACGGG 2603
Query 1408 ACCCCTCTGCCC-------------------------------------------------------------- 1419
||||||||||||
Sbjct 2604 ACCCCTCTGCCCTGACCCCACGGGGCCGGGGAGGGAGGGGACCCCCCTCCACCCCCCTTCCGTGCCCCCCAACT 2677
Query 1420 -------------------------------------------------------------------------- 1419
Sbjct 2678 GTGAATCTGTAAATAAGGCCCAAGGAACATGTCGGGAGGGGGGTGGACACAAAAACCGGCCTTGCCCTGCAGGG 2751
Query 1420 -------------------------------------------------------------------------- 1419
Sbjct 2752 ATGGGGCTCCACAGGCCGTGCCCAACTGGGGGTGGTTCTAGGGGAACAGGGGGCGGGGGAGCTGTTTCTATTTT 2825
Query 1420 -------------------------------------------------------------------------- 1419
Sbjct 2826 ATTTATTGATTAATTTATTATTTTATTTATTGATCAATCTCTCTGCGGGGTGGGGTGGGGGAGGGACGGGAGCT 2899
Query 1420 -------------------------------------------------------------------------- 1419
Sbjct 2900 GGTTGGGGTGGCTTAGCAGATCCGGACAGGGCCCTCTGTCCCTGTGTCGTCCCCAACCCCCTCTTCCCGGGCCC 2973
Query 1420 -------------------------------------------------------------------------- 1419
Sbjct 2974 CTCCTCCCCTGGTCCTCCCCCCACGACCTTCTGTACGGATTTGCTCTCCGGAAGGAATTCTGGTTTCGCGTGAT 3047
Query 1420 ----------------------------------------------------------------- 1419
Sbjct 3048 CCTGCCTGCGTCCGTGTCTCTGATTCCGCCGGCGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3112
