Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15207
- Subject:
- NM_001367173.2
- Aligned Length:
- 1468
- Identities:
- 710
- Gaps:
- 659
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTCAGGACCCTGTGGCCTGTGAGGATGTTGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCGCAGAGGAAACTCTACAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTATAGGGAAAAAGTGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGACCAGAACATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGGGAATGTCAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAATTAAAGAAGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAACTTCCAGGAGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAAGCTTCTCCTGAAGCAAAATCATGTGATAACTTTGTATGTGGAGAAGTTGGCATAGGTAACTCATCTTTTA 370
Query 1 --ATGAACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAGAGT 72
|||||||||||||||||||.|||.||||||||||..||.|.||||||.||||.|||||||||||..|||.||
Sbjct 371 ATATGAACATCAGAGGTGACATTGGGCACAAGGCATACGAGTATCAGGACTATGCACCAAAGCCATATAAGTGT 444
Query 73 CAACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAAACC 146
|||||||||||.||||||||||||||||||||||||||.|||||||||||||||.|||||||.|||.|||||||
Sbjct 445 CAACAACCTAAGAAAGCCTTCAGATATCACCCCTCCTTTAGAACACAAGAAAGGAATCACACCGGAGAGAAACC 518
Query 147 CTATGCTTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACAGTG 220
||||||||||||||||||||||||||.|.||||||.|||||||.||||||.|||||.|||||||.|||||||||
Sbjct 519 CTATGCTTGTAAAGAATGTGGAAAAACCTTTATTTCCCATTCAGGCATTCGAAGACGCATGGTAATGCACAGTG 592
Query 221 GGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAAAGA 294
|||||||||||||||||||||||||||||||||||||..|||||||||||||.|||||||||||||||||||||
Sbjct 593 GGGATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCTGTCCATTGTCTCAGATTATATCTTATCCATGAAAGA 666
Query 295 ACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCGAAT 368
||||||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||
Sbjct 667 ACTCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGTTAAATCCTTTAGTTATTCTGCTACCCATCGAAT 740
Query 369 ACATGAAAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCAGAT 442
|||||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||||||||||.||||.|
Sbjct 741 ACATGAAAGAACTCACACTGGAGAAAAGCCTTATGAATGTCAGCAATGTGGGAAAGCATTCCATAGTTCCAGTT 814
Query 443 CCTGTCACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCATG 516
|.|.|| ||||
Sbjct 815 CTTTTC---------------------------------------------------------AAGC------- 824
Query 517 TGTCCCCGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGGGAA 590
||||.||||.||||||.||.||..|||.|..|||||||||||.||.|||||.||
Sbjct 825 --------------------ACATAAAAGAACCCACACTGGGGGAAAGCCATATGAATGTAAACAATGTGGCAA 878
Query 591 AGCATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGA 664
||||| || ||| ||| |||
Sbjct 879 ------ATCCT-TC-----AGT--------------------------TGG----------------TGT---- 894
Query 665 CATGTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCGTAT 738
||| ||.|||||||.||||||||.||||||||.|||.|||||.||.|.|
Sbjct 895 CAT--------------------------TCCTTTCAAATACATGAAAGAACTCACACTGGGGAGAAGCCCTGT 942
Query 739 AAATGCAAGC-AATGTGGTAAAGCCTTCACTCGTTCCGGTTCCT---TTCGATATCATGAAAGGACTCACACTG 808
.|||| .||| |||||..||||||.|||..|.|||.|.|.|||| ||.|| |||.||||||.||||||.|
Sbjct 943 GAATG-TAGCAAATGTAATAAAGCATTCCGTAGTTACAGATCCTATCTTAGA---CATAAAAGGAGTCACACGG 1012
Query 809 GAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATCGCATGGTAGG 882
|||||||.||.|||.|.||||||.|||||.|.|||||.||||
Sbjct 1013 GAGAGAAGCCTTATCAATGTAAGGAATGTAGAAAAGCATTCA-------------------------------- 1054
Query 883 ACTCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTGCCTCACAACTTCGAAT 956
|||||| .|||.|| .|||||.|.
Sbjct 1055 -------------------CGTATC------------------------CCAGTTC---------CCTTCGTAG 1076
Query 957 CCATCGTAGGATTCACACTG-GAGAGAAACCCTATGAATGTAAGAAATGTGGGAAAGCCT--TCAGATATGTCC 1027
.|||...||||..|||.||| || |.|||||.||||||||||||.|.|||||||||||.| ||..|||.||
Sbjct 1077 ACATGAAAGGACCCACTCTGCGA-AAAAACCTTATGAATGTAAGCAGTGTGGGAAAGCATTATCTTATAAGT-- 1147
Query 1028 AGAACTTTCGATTTCATGAAAGGACAAACACACATAAGAATGCACTCTGGAGAAAGACCTTA 1089
||| |||||||||.|||||||||.||||||||||||||||||
Sbjct 1148 -----TTT----------------CAAACACACCTAAGAATGCGCTCTGGAGAAAGACCTTA 1188