Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15207
• Subject: NM_001367174.2
• Aligned Length: 1096
• Identities: 710
• Gaps: 287

Alignment

Query    1  ATGAACATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAGAGTCA  74
            |||||||||||||||||||.|||.||||||||||..||.|.||||||.||||.|||||||||||..|||.||||
Sbjct    1  ATGAACATCAGAGGTGACATTGGGCACAAGGCATACGAGTATCAGGACTATGCACCAAAGCCATATAAGTGTCA  74

Query   75  ACAACCTAAAAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAAACCCT  148
            |||||||||.||||||||||||||||||||||||||.|||||||||||||||.|||||||.|||.|||||||||
Sbjct   75  ACAACCTAAGAAAGCCTTCAGATATCACCCCTCCTTTAGAACACAAGAAAGGAATCACACCGGAGAGAAACCCT  148

Query  149  ATGCTTGTAAAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACAGTGGG  222
            ||||||||||||||||||||||||.|.||||||.|||||||.||||||.|||||.|||||||.|||||||||||
Sbjct  149  ATGCTTGTAAAGAATGTGGAAAAACCTTTATTTCCCATTCAGGCATTCGAAGACGCATGGTAATGCACAGTGGG  222

Query  223  GATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAAAGAAC  296
            |||||||||||||||||||||||||||||||||||..|||||||||||||.|||||||||||||||||||||||
Sbjct  223  GATGGACCTTATAAATGTAAGTTTTGTGGGAAAGCTGTCCATTGTCTCAGATTATATCTTATCCATGAAAGAAC  296

Query  297  TCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCGAATAC  370
            ||||||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||||
Sbjct  297  TCACACTGGAGAGAAACCGTATGAATGTAAACAATGTGTTAAATCCTTTAGTTATTCTGCTACCCATCGAATAC  370

Query  371  ATGAAAGAACTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCAGATCC  444
            |||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||||||||||.||||.||.
Sbjct  371  ATGAAAGAACTCACACTGGAGAAAAGCCTTATGAATGTCAGCAATGTGGGAAAGCATTCCATAGTTCCAGTTCT  444

Query  445  TGTCACAGACATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCATGTG  518
            |.||                                                         ||||         
Sbjct  445  TTTC---------------------------------------------------------AAGC---------  452

Query  519  TCCCCGTTATGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGGGAAAG  592
                              ||||.||||.||||||.||.||..|||.|..|||||||||||.||.|||||.||  
Sbjct  453  ------------------ACATAAAAGAACCCACACTGGGGGAAAGCCATATGAATGTAAACAATGTGGCAA--  506

Query  593  CATTATCCTCTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGACA  666
                ||||| ||     |||                          |||                |||    ||
Sbjct  507  ----ATCCT-TC-----AGT--------------------------TGG----------------TGT----CA  524

Query  667  TGTGGGAAAGGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCGTATAA  740
            |                          ||.|||||||.||||||||.||||||||.|||.|||||.||.|.|.|
Sbjct  525  T--------------------------TCCTTTCAAATACATGAAAGAACTCACACTGGGGAGAAGCCCTGTGA  572

Query  741  ATGCAAGC-AATGTGGTAAAGCCTTCACTCGTTCCGGTTCCT---TTCGATATCATGAAAGGACTCACACTGGA  810
            ||| .||| |||||..||||||.|||..|.|||.|.|.||||   ||.||   |||.||||||.||||||.|||
Sbjct  573  ATG-TAGCAAATGTAATAAAGCATTCCGTAGTTACAGATCCTATCTTAGA---CATAAAAGGAGTCACACGGGA  642

Query  811  GAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATCGCATGGTAGGAC  884
            |||||.||.|||.|.||||||.|||||.|.|||||.||||                                  
Sbjct  643  GAGAAGCCTTATCAATGTAAGGAATGTAGAAAAGCATTCA----------------------------------  682

Query  885  TCACACTGGAGAGAAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCTGCCTCACAACTTCGAATCC  958
                             ||||||                        .|||.||         .|||||.|..|
Sbjct  683  -----------------CGTATC------------------------CCAGTTC---------CCTTCGTAGAC  706

Query  959  ATCGTAGGATTCACACTG-GAGAGAAACCCTATGAATGTAAGAAATGTGGGAAAGCCT--TCAGATATGTCCAG  1029
            ||...||||..|||.||| || |.|||||.||||||||||||.|.|||||||||||.|  ||..|||.||    
Sbjct  707  ATGAAAGGACCCACTCTGCGA-AAAAACCTTATGAATGTAAGCAGTGTGGGAAAGCATTATCTTATAAGT----  775

Query 1030  AACTTTCGATTTCATGAAAGGACAAACACACATAAGAATGCACTCTGGAGAAAGACCTTA  1089
               |||                |||||||||.|||||||||.||||||||||||||||||
Sbjct  776  ---TTT----------------CAAACACACCTAAGAATGCGCTCTGGAGAAAGACCTTA  816