Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15207
- Subject:
- XM_006722873.4
- Aligned Length:
- 1710
- Identities:
- 998
- Gaps:
- 624
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCGGGACATCTGAAAGCCAGGAAATGATGTTTCAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCAGTGGCCTTTGATGATGTTGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACTCTACAAGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTGTAGGAAAAAGTTGGAAAGACCAGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTGAATATGAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAAAGAAAGTCAATGAAATTAAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAACTTCCAGGAGAAGAAAGCTTCTC 370
Query 1 -----------------------------------------------------------------ATGAACATC 9
|||||||||
Sbjct 371 CTGAAATAAAATCATGTGACAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATC 444
Query 10 AGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGAATATGGACCAAAGCCATGGAAGAGTCAACAACCTAA 83
||||||||||.||||||||||||.|.|||.|.|||||||||||||||.||||||||.|||.|||||||||||||
Sbjct 445 AGAGGTGACATTGGACACAAGGCCTATGAGTATCAGGAATATGGACCGAAGCCATGTAAGTGTCAACAACCTAA 518
Query 84 AAAAGCCTTCAGATATCACCCCTCCTTGAGAACACAAGAAAGGGATCACACTGGAAAGAAACCCTATGCTTGTA 157
|||||||||||||||||||||||||||.|||||||.|.|||||||||||||||||.||||||||||||||||||
Sbjct 519 AAAAGCCTTCAGATATCACCCCTCCTTTAGAACACCACAAAGGGATCACACTGGAGAGAAACCCTATGCTTGTA 592
Query 158 AAGAATGTGGAAAAAACATTATTTACCATTCAAGCATTCAAAGACACATGGTAGTGCACAGTGGGGATGGACCT 231
|||||||||||||||...||||||.||||||||||||||||||||||.|||||.||||||||||||||||||||
Sbjct 593 AAGAATGTGGAAAAACTTTTATTTCCCATTCAAGCATTCAAAGACACGTGGTAATGCACAGTGGGGATGGACCT 666
Query 232 TATAAATGTAAGTTTTGTGGGAAAGCATTCCATTGTCTCAGTTTATATCTTATCCATGAAAGAACTCACACTGG 305
|||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 667 TATAAATGTAAATTTTGTGGGAAAGCCTTCCATTGTCTCAGTTTATATCTTATCCATGAAAGAATTCACACTGG 740
Query 306 AGAGAAACCGTATGAATGTAAACAATGTGGTAAATCTTTTAGTTATTCTGCTACCCATCGAATACATGAAAGAA 379
|||||||||.||||||||||||||||||||||||||.|||||||||||||||||||.|||||||||.|||||||
Sbjct 741 AGAGAAACCATATGAATGTAAACAATGTGGTAAATCCTTTAGTTATTCTGCTACCCTTCGAATACACGAAAGAA 814
Query 380 CTCACATTGGAGAAAAGCCTTATGAATGTCAGGAATGTGGGAAAGCATTCCATAGTCCCAGATCCTGTCACAGA 453
||||||.|||||||||||||||||||||||||.||||||||||||||||.|||||||||||||.||.||..|||
Sbjct 815 CTCACACTGGAGAAAAGCCTTATGAATGTCAGCAATGTGGGAAAGCATTTCATAGTCCCAGATGCTATCGTAGA 888
Query 454 CATGAAAGGAGTCACATGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCATGTGTCCCCGTTA 527
||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||..||
Sbjct 889 CATGAAAGGATTCACACGGGAGAGAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCCCAGTA 962
Query 528 TGTTCGTAGACATGAAAGGACCCACTCTAGGAAAAAACTTTATGAATGTAAGCAGTGTGGGAAAGCATTATCCT 601
||||||||.|||||||||||||||||||||||||||||..||||||||||.|||||||||||||||||||||||
Sbjct 963 TGTTCGTATACATGAAAGGACCCACTCTAGGAAAAAACCCTATGAATGTACGCAGTGTGGGAAAGCATTATCCT 1036
Query 602 CTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGACATGTGGGAAA 675
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1037 CTCTTACAAGTTTTCAAACACACATAAGAATGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTGGGAAA 1110
Query 676 GGCTTTTATTCTGCCAAGTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCGTATAAATGCAAGCA 749
|||||||.|||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1111 GGCTTTTGTTCTGCCAATTCATTTCAAAGACATGAAAAAACTCACAGTGGAGAGAAACCCTATAAATGCAAGCA 1184
Query 750 ATGTGGTAAAGCCTTCACTCGTTCCGGTTCCTTTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTATG 823
|||||||||||||||||.||.||||.|||||.||||.|||||||||||||.|||||||||||||||||||||||
Sbjct 1185 ATGTGGTAAAGCCTTCATTCATTCCAGTTCCCTTCGTTATCATGAAAGGATTCACACTGGAGAGAAACCCTATG 1258
Query 824 AGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCCCAAATCTTCAATCGCATGGTAGGACTCACACTGGAGAG 897
|||||||||||||||||||.||||||||||||.||.||.|.|||||||.|||||||||||||||||||||||||
Sbjct 1259 AGTGTAAGCAATGTGGGAAGGCCTTCAGATCTTCCTCACACCTTCAATTGCATGGTAGGACTCACACTGGAGAG 1332
Query 898 AAACCGTATCAATGTAAGGAATGTGGGAAAGCTTTCAGATCT-------GCCT-----------------CACA 947
||.||.|||.|||||.||||||||||||||||.||||||||| .||| ||||
Sbjct 1333 AAGCCCTATGAATGTCAGGAATGTGGGAAAGCCTTCAGATCTATGAAGAACCTTCAAAGTCATGAAAGGACACA 1406
Query 948 A-------------------------------CTT-------------------------------------CG 953
| ||| |.
Sbjct 1407 AACACACGTAAGAATACACTCTGGAGAAAGACCTTATAAATGTAAGCTATGTGGGAAAGGCTTTTATTGTCCCA 1480
Query 954 AATC----------CATCGTAGGATTCACACTGGAGAGAAACCCTATGAATGTAAGAAATGTGGGAAAGCCTTC 1017
|||| |||...|..|.|||||||||||||||||.|||||||||.|||.|||||||..||||||||
Sbjct 1481 AATCATTGCAAAGACATGAAAAAACTCACACTGGAGAGAAACTCTATGAATGCAAGCAATGTGGTGAAGCCTTC 1554
Query 1018 AGATATGTCCAG-AACTTTCGATTTCATGAAAGGACAAACAC---------AC---ATAA--GAATGCACTCTG 1076
|| ||..||||| ..||||||||..|||||||||||..|||| || |||| |.|.|||.|.||
Sbjct 1555 AG-TAGTTCCAGTTCCTTTCGATACCATGAAAGGACTCACACTGGAGAGAAACCCTATAAATGCAAGCAATGTG 1627
Query 1077 GAGAAAGACCTTA------------------------------------------------------------- 1089
| ||||| ||||.
Sbjct 1628 G-GAAAG-CCTTCAGAGCTGCCTCAGTCCTTCGAATGCATGGTAGGACTCACCCTGAAGATAAACCCTATGAGT 1699
Query 1090 -------- 1089
Sbjct 1700 GTAAGCAA 1707
