Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15236
- Subject:
- NM_001321163.2
- Aligned Length:
- 1845
- Identities:
- 412
- Gaps:
- 1416
Alignment
Query 1 ------------------------------------------------------------ATGGACCCAGTGGC 14
||||||||||||||
Sbjct 1 ATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCCCGGGACATCTGAAAGCCAGGAAATGGACCCAGTGGC 74
Query 15 TTTTAAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGAAACTCTACA 88
.|||.|.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTTGATGATGTTGCTGTGAACTTCACCCAGGAGGAGTGGGCTTTGCTGGATATTTCCCAGAGGAAACTCTACA 148
Query 89 GGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTTTAGGAAAAAGGTGGAAAGACCAGAACATTGAATAT 162
.|||||||||||||||||||||||||||||||||||||.||||||||||.||||||||||||||||||||||||
Sbjct 149 AGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTGTAGGAAAAAGTTGGAAAGACCAGAACATTGAATAT 222
Query 163 GAGCACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAGAAAAAGTCAATGAAATTAAAGATGACAGTCA 236
|||.||||||||||||||||||||||||||||||||||||||.|.|||||||||||||||||||||||||||||
Sbjct 223 GAGTACCAAAACCCCAGGAGAAACTTCAGGAGTCTCATAGAAAAGAAAGTCAATGAAATTAAAGATGACAGTCA 296
Query 237 TTGTGGAGAAACTTTTACCCCAGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGCTTCTCCTGAAGTAA 310
||||||||||||||||||||..||||||||||||||.|||||||||||||||||||||||||||||||||.|||
Sbjct 297 TTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGGCTGAACTTCCAGGAGAAGAAAGCTTCTCCTGAAATAA 370
Query 311 AATCATGTGAAAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATCAGAGGTGAC 384
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AATCATGTGACAGCTTTGTGTGTGGAGAAGTTGGCCTAGGTAACTCATCTTTTAATATGAACATCAGAGGTGAC 444
Query 385 ATTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATGTAAGTGTCAACAACCTAAAAAAGCCTT 458
||||||||||||||.|||||||||||||||||||||||.||||||
Sbjct 445 ATTGGACACAAGGCCTATGAGTATCAGGAATATGGACCGAAGCCA----------------------------- 489
Query 459 CAGATACCGCCCCTCCTTTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCAATGCTTGTAAAGTATGTG 532
Sbjct 490 -------------------------------------------------------------------------- 489
Query 533 GAAAAACCTTTATTTCCCATTCAAGTGTTCGAAGACACATGGTAATGCACAGTGGGGATGGACCTTATAAATGT 606
Sbjct 490 -------------------------------------------------------------------------- 489
Query 607 AAGTTTTGTGGGAAAGCATTCCATTGTCTCAGATTATATCTTATCCATGAAAGAATTCACACTGGAGAGAAACC 680
Sbjct 490 -------------------------------------------------------------------------- 489
Query 681 ATGTGAATGTAAACAGTGTGGTAAATCCTTTAGTTATTCTGCTACCCATCGAATACATAAAAGAACTCACACTG 754
Sbjct 490 -------------------------------------------------------------------------- 489
Query 755 GAGAAAAGCCTTATGAATATCAGGAGTGTGGGAAAGCATTTCATAGTCCCAGATCCTATCGTAGACATGAAAGG 828
Sbjct 490 -------------------------------------------------------------------------- 489
Query 829 ATTCACATGGGAGAAAAGGCTTATCAATGTAAGGAATGTGGAAAAGCATTCACGTGTCCCCGTTATGTTCGTAT 902
Sbjct 490 -------------------------------------------------------------------------- 489
Query 903 ACATGAAAGGACCCACTCTAGGAAAAATCTCTATGAATGTAAGCAGTGTGGGAAAGCATTATCCTCTCTTACAA 976
Sbjct 490 -------------------------------------------------------------------------- 489
Query 977 GTTTTCAAACACACGTAAGATTGCACTCTGGAGAAAGACCTTATGAATGTAAGATATGTGGAAAAGACTTTTGT 1050
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1051 TCTGTGAATTCATTTCAAAGACATGAAAAAATTCACAGTGGAGAGAAACCCTATAAATGTAAGCAGTGTGGTAA 1124
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1125 AGCCTTCCCTCATTCCAGTTCCCTTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTATGAGTGTAAGC 1198
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1199 AATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCGAGTGCATGGTAGGACTCACACTGGAGAGAAACCGTAT 1272
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1273 GAATGTAAGGAATGTGGGAAAGCCTTCAGATATGTGAATAACCTTCAAAGTCATGAAAGGACACAAACACACAT 1346
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1347 AAGAATACACTCTGGAGAAAGACGTTATAAATGTAAGATATGTGGGAAAGGCTTTTATTGTCCCAAATCATTTC 1420
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1421 AAAGACATGAAAAAACTCACACTGGAGAGAAACTCTATGAATGCAAGCAACGTTCAGTAGTTCCTTCAGTAGTT 1494
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1495 CCAGTTCCTTTTGATATCATGAAAGGACTCACACTGGAGAGAAGCCCTATAAATGCGAGCAATGTGGGAAAGCC 1568
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1569 TTCAGAGCTGTGTCAATCCTTTGAATGCATGGTAGGACTCACCCTGAAGAGAAACCCTATGAGTGTGAGCAATG 1642
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1643 ACGGAAAGCCTTCAGATCTGCCCCACACCTTTGAATACGTGGTAGGACACACAATGGAGAGAAGCCCTATGCAT 1716
Sbjct 490 -------------------------------------------------------------------------- 489
Query 1717 GTAAGGAATGTGGGAAACCCTTCGGATCTGCCCATAACCTTCAAAGTCATGAAAGGACACAAACACACA 1785
Sbjct 490 --------------------------------------------------------------------- 489
