Protein Global Alignment

Description

Query:
ccsbBroad304_15236
Subject:
NM_001348718.1
Aligned Length:
618
Identities:
395
Gaps:
134

Alignment

Query   1  -----------------------MDPVAFKDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSLGKRWKDQN  51
                                  .||||||||||||||||||||||||..||||||||||.||||.||.|||||
Sbjct   1  MPCFTHRSCREDPGTSESREMMFQDPVAFKDVAVNFTQEEWALLDISQKNLYREVMLETFWNLTSIGKKWKDQN  74

Query  52  IEYEHQNPRRNFRSLIEEKVNEIKDDSHCGETFTPVPDDRLNFQEKKASPEVKSCESFVCGEVGLGNSSFNMNI  125
           ||||.|||||||||..||||||||.|||||||||||||||||||.||||||||||.|||| ||||||||.||||
Sbjct  75  IEYEYQNPRRNFRSVTEEKVNEIKEDSHCGETFTPVPDDRLNFQKKKASPEVKSCDSFVC-EVGLGNSSSNMNI  147

Query 126  RGDIGHKAYEYQEYGPKPCKCQQPKKAFRYRPSFRTQERDHTGEKPNACKVCGKTFISHSSVRRHMVMHSGDGP  199
           |||.||||.|.|||||||.|.|||||||||.||.|||||||||.||.|||.|||..|.|||..||||.||||||
Sbjct 148  RGDTGHKACECQEYGPKPWKSQQPKKAFRYHPSLRTQERDHTGKKPYACKECGKNIIYHSSIQRHMVVHSGDGP  221

Query 200  YKCKFCGKAFHCLRLYLIHERIHTGEKPCECKQCGKSFSYSATHRIHKRTHTGEKPYEYQECGKAFHSPRSYRR  273
           |||||||||||||.|||||||.||||||.||||||||||||||||||.|||.||||||.||||||||||||..|
Sbjct 222  YKCKFCGKAFHCLSLYLIHERTHTGEKPYECKQCGKSFSYSATHRIHERTHIGEKPYECQECGKAFHSPRSCHR  295

Query 274  HERIHMGEKAYQCKECGKAFTCPRYVRIHERTHSRKNLYECKQCGKALSSLTSFQTHVRLHSGERPYECKICGK  347
           |||.||||||||||||||||.||||||.||||||||.||||||||||||||||||||.|.||||||||||.|||
Sbjct 296  HERSHMGEKAYQCKECGKAFMCPRYVRRHERTHSRKKLYECKQCGKALSSLTSFQTHIRMHSGERPYECKTCGK  369

Query 348  DFCSVNSFQRHEKIHSGEKPYKCKQCGKAFPHSSSLRYHERTHTGEKPYECKQCGKAFRSASHLRVHGRTHTGE  421
           .|.|..|||||||.||||||||||||||||..|.|.|||||||||||||||||||||||||..|..||||||||
Sbjct 370  GFYSAKSFQRHEKTHSGEKPYKCKQCGKAFTRSGSFRYHERTHTGEKPYECKQCGKAFRSAPNLQLHGRTHTGE  443

Query 422  KPYECKECGKAFRYVNNLQSHERTQTHIRIHSGERRYKCKICGKGFYCPKSFQRHEKTHTGEKLYECKQRSVVP  495
           |||.|||||||||....|..|.      |||.||..|.||.|||.|.....|..||.|.|.......|..    
Sbjct 444  KPYQCKECGKAFRSASQLRIHR------RIHTGEKPYECKKCGKAFRYVQNFRFHERTQTHKNALWRKTL----  507

Query 496  SVVPVPFDIMKGLTLERSPINASNVGKPSELCQSFECMVGLTLKRNPMSVSNDGKPSDLPHTFEYVVGHTMERS  569
                                                                                     
Sbjct 508  --------------------------------------------------------------------------  507

Query 570  PMHVRNVGNPSDLPITFKVMKGHKHT  595
                                     
Sbjct 508  --------------------------  507