Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15247
- Subject:
- XM_024446658.1
- Aligned Length:
- 3484
- Identities:
- 2065
- Gaps:
- 1310
Alignment
Query 1 ATGGCGACCTCCGAGAGGGCTCTCCTGAGGACCAGAGCTGCCTCTCTCCTGAGAGGCTTGGGCAGATCCCGAAC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACCTCCGAGAGGGCTCTCCTGAGGACCAGAGCTGCCTCTCTCCTGAGAGGCTTGGGCAGATCCCGAAC 74
Query 75 TGGAGCCCGATCGTTACAGTTTCGCGCAGAAAAAGAGCGTCAGCCTTGCTGGTCTTTTCCCATGGGGCAGAAGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGAGCCCGATCGTTACAGTTTCGCGCAGAAAAAGAGCGTCAGCCTTGCTGGTCTTTTCCCATGGGGCAGAAGA 148
Query 149 CGAAAGGCAGCTCTAACATAGCCTCCTCCTACCTGCTCCAGCAGCTCATGCACCGCTATCAGGAGCTGGACTCG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGAAAGGCAGCTCTAACATAGCCTCCTCCTACCTGCTCCAGCAGCTCATGCACCGCTATCAGGAGCTGGACTCG 222
Query 223 GACGGAGATGAGGACCAGGGCGAGGGCGAGGCGGGATCCGAGGAGTCCTCAGAGTCCGAAATGCTGAATTTGGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GACGGAGATGAGGACCAGGGCGAGGGCGAGGCGGGATCCGAGGAGTCCTCAGAGTCCGAAATGCTGAATTTGGA 296
Query 297 GGAGGAATTTGATGGGGTCCTGAGAGAGGAGGCTGTGGCCAAAGCACTCCATCACTTGGGGCGCTCAGGCTCTG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGGAATTTGATGGGGTCCTGAGAGAGGAGGCTGTGGCCAAAGCACTCCATCACTTGGGGCGCTCAGGCTCTG 370
Query 371 GGACTGAGCAAGTCTACCTCAATCTAACTTTATCAGGTTGTAATTTAATTGATGTTAGCATTCTCTGTGGATAT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGACTGAGCAAGTCTACCTCAATCTAACTTTATCAGGTTGTAATTTAATTGATGTTAGCATTCTCTGTGGATAT 444
Query 445 GTTCATCTACAGAAGTTGGATCTTTCAGCGAATAAAATTGAAGATTTATCTTGTGTGAGTTGTATGCCTTATCT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTTCATCTACAGAAGTTGGATCTTTCAGCGAATAAAATTGAAGATTTATCTTGTGTGAGTTGTATGCCTTATCT 518
Query 519 CCTAGAACTTAATGCTTCTCAAAATAATTTGACTACGTTCTTCAATTTCAAGCCACCCAAAAACCTCAAGAAAG 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCTAGAACTTAATGCTTCTCAAAATAATTTGACTACGTTCTTCAATTTCAAGCCACCCAAAAACCTCAA----- 587
Query 593 CGGATTTTTCCCACAACCAAATTTCTGAAATTTGTGATTTGTCAGCGTATCATGCTCTCACTAAACTAATTTTG 666
Sbjct 588 -------------------------------------------------------------------------- 587
Query 667 GATGGCAATGAGATAGAAGAATCAGTGGACTAGAGATGTGCACACCTAATTCACCTTAGTTTGGCCACAATAGA 740
Sbjct 588 -------------------------------------------------------------------------- 587
Query 741 TCACGACATTAATGGCTTAAACAAGTTACCAATCAAAATACTTTGTTCTGAGCAATAACCAGATTGAGATGATC 814
|||||||||||||||||||||||||
Sbjct 588 -------------------------------------------------GAGCAATAACCAGATTGAGATGATC 612
Query 815 ACAGGTTTGGAGGATCTGAAAGCCCTGCAGAACCTGGATCTGTCCCACAATCAGATAAGCAGCCTCCAAGGCTT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 613 ACAGGTTTGGAGGATCTGAAAGCCCTGCAGAACCTGGATCTGTCCCACAATCAGATAAGCAGCCTCCAAGGCTT 686
Query 889 AGAGAATCATGACCTCCTGGAAGTGATCAACCTGGAGGATAATAAGATTGCTGAGCTGAGAGAAATAGAATACA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 687 AGAGAATCATGACCTCCTGGAAGTGATCAACCTGGAGGATAATAAGATTGCTGAGCTGAGAGAAATAGAATACA 760
Query 963 TTAAAAATTTACCCATCCTTCGAGTTCTCAATCTTCTAGAAAATCCAATTCAGGAAAAGTCTGAATATTGGTTC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 TTAAAAATTTACCCATCCTTCGAGTTCTCAATCTTCTAGAAAATCCAATTCAGGAAAAGTCTGAATATTGGTTC 834
Query 1037 TTCGTAATTTTTATGCTTCTGCGATTAACAGAATTAGATCAGAAGAAGATTAAAGTGGAAGAAAAGGTTTCAGC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 TTCGTAATTTTTATGCTTCTGCGATTAACAGAATTAGATCAGAAGAAGATTAAAGTGGAAGAAAAGGTTTCAGC 908
Query 1111 AGTGAATAAATATGATCCTCCCCCTGAAGTGGTTGCAGCTCAAGACCACCTGACCCATGTTGTCAACAGCGTGA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 AGTGAATAAATATGATCCTCCCCCTGAAGTGGTTGCAGCTCAAGACCACCTGACCCATGTTGTCAACAGCGTGA 982
Query 1185 TGCAGCCGCAGAGGATCTTTGACAGCACTCTTCCCAGCCTGGATGCTCCTTATCCCATGCTGATACTAGCTGGT 1258
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 983 TGCAGCCGCAGAGGATCTTTGACAGCACTCTTCCCAGCCTGGATGCCCCTTATCCCATGCTGATACTAGCTGGT 1056
Query 1259 CCTGAAGCTTGTGGGAAACGAGAGCTTGCCCATCGCCTCTGCAGACAGTTTAGCACTTACTTCAGATATGGGGC 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 CCTGAAGCTTGTGGGAAACGAGAGCTTGCCCATCGCCTCTGCAGACAGTTTAGCACTTACTTCAGATATGGGGC 1130
Query 1333 CTGTCATACCACAAGACCACCTTACTTTGGAGAAGGGGATCGAGTTGATTATCATTTTATCTCTCAAGACGTTT 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 CTGTCATACCACAAGACCACCTTACTTTGGAGAAGGGGATCGAGTTGATTATCATTTTATCTCTCAAGACGTTT 1204
Query 1407 TTGATGAAATGGTGAACATGGGGAAATTCATTCTAACATTTAGTTATGGTAATCACAAGTATGGATTAAATAGG 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1205 TTGATGAAATGGTGAACATGGGGAAATTCATTCTAACATTTAGTTATGGTAATCACAAGTATGGATTAAATAGG 1278
Query 1481 GACACCGTAGAAGGTATCGCAAGAGATGGTTTGGCAAGCTGTATTCATATGGAAATAGAAGGTGTAAGAAGTTT 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1279 GACACCGTAGAAGGTATCGCAAGAGATGGTTTGGCAAGCTGTATTCATATGGAAATAGAAGGTGTAAGAAGTTT 1352
Query 1555 GAAATATTCCTATTTTGAGCCTCGTTATATCCTGGTGGTGCCCATGAACAAGGAAAAATATGAGGGATATTTGC 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1353 GAAATATTCCTATTTTGAGCCTCGTTATATCCTGGTGGTGCCCATGAACAAGGAAAAATATGAGGGATATTTGC 1426
Query 1629 GGAGAAAAGGATTATTCAGTCGTGCAGAAATTGAATTTGCTGTCTCCAGAGTGGACCTTTATAATAAAAATTAA 1702
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.||||||||
Sbjct 1427 GGAGAAAAGGATTATTCAGTCGTGCAGAAATTGAATTTGCTGTCTCCAGAGTGGACCTTTAT-ATTAAAATTAA 1499
Query 1703 TCAGAATTTTCCGGGGATATTTGAATGAGGTAATCAATGCAGATGATCTGGATG-TGCCTTACAAAAAACTGAG 1775
|||||||||||| |||||||||..|||||||||||||||||||||||||||||| |||| |||.||||||||||
Sbjct 1500 TCAGAATTTTCC-GGGATATTTTGATGAGGTAATCAATGCAGATGATCTGGATGTTGCC-TACCAAAAACTGAG 1571
Query 1776 TCAGCTCATTAGAGAATACCTTGGATGGAATGAGGAACCTGCCAAGAGTTTGGCTACAACTGCAGATGTA---- 1845
||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||..|.|
Sbjct 1572 TCAGCTCATTAGAGAATACCTTGGATTGACTGAGGAACCTGCCAAGAGTTTGGCTACAACTGCAGCAGGAGCTC 1645
Query 1846 --------AAGA------------------CATCCCACCT------------------------GAAACCTG-A 1868
|||| ||.|.||||| |||| ||| |
Sbjct 1646 CCGCTAGCAAGAAGACTGTCTCTGGGGTGCCAGCACACCTGGTTCCATCTCCCAGGTGCTTGGCGAAA-CTGCA 1718
Query 1869 AGC------------------GCATC---CTACAAAGTATATT----------TCTTCGAATAT----GGGTGA 1907
||| ||||| ||..||.|.|.||| .|.|.|||.|| |.|| |
Sbjct 1719 AGCAGATGGCCAGATGACAGAGCATCTCTCTGGAATGCAAATTCATGCCAAGGACCTAGAAAATCAGAGCGT-A 1791
Query 1908 TTTCCT-----------------------------------------------GCATTCTACAGACAG------ 1928
..|||| ||.||||.|.|||||
Sbjct 1792 ACTCCTGCCCAGAACCAAGAGCTGGCTCAGGATGGAGAAACCCATCAAAAAGAGCTTTCTCCTGACAGCCATCT 1865
Query 1929 ----------------AAACTACCTCATTAAAT----TTTGGGCCAAACTT--TCAG-----CCAAAA------ 1969
.||| ||||||.|..|| ..|||| .||| |||| |||..|
Sbjct 1866 CAATCCTGAGCTCCCTCAAC-ACCTCAGTTCATCAGCACTGGG----TCTTCCTCAGCAGGCCCAGGACCTATC 1934
Query 1970 ---AAACACCAGCGGAA-----------------AGAGATT---CTATACACAGACAG-CAC-GAGGCAG---- 2014
|||| |||.||||| |||..|| ||| |.|||.|.|| ||| |||.|||
Sbjct 1935 CCTAAAC-CCAACGGAAGAGGATGTCCAACAATCAGATCTTCCCCTA-AAACAAATAGCCACTGAGACAGATGT 2006
Query 2015 CCCGGCAAGCTCTAA-----------TGGGAAGGATACGCCCTGATCACAC-----------ACTCCTAT---- 2062
|||.| ||.|..|| ||||.|| .|.||| |||||.| .|||||.|
Sbjct 2007 CCCTG--AGGTGGAAGCCAGTGAGGTTGGGCAG---TCTCCC--ATCACCCCGACCCTGGTGCCTCCTGTGCAC 2073
Query 2063 --TTC------------------------------------AAAGGGGTC----CAGTACCAG----------- 2083
||| .||||.||| .||..||||
Sbjct 2074 CCTTCCCCTCCCTCGTCCCGCAGCCCTCAGCCAGGCCAGGACAAGGAGTCAGGGGAGGCCCAGGTAACCCCTAC 2147
Query 2084 -----CACCTCTCACCAGTGGTCTACACTATTATACA-------------ACT-----------TTAGAAGAAC 2128
|.||||| ||||..|| .|.|||| ||| |.|| ||||.
Sbjct 2148 TGGCCCTCCTCT--------GTCTGAAC--CTCTACAGGGACCTGGCCCCACTCCCCTCAGCCCTCAG-AGAAT 2210
Query 2129 TCTGGA-----AAAGTTTTGA-TCTTTGTGAAGACTATTTTAAACCTCCA--------TTTGGACCAT-ATCCT 2187
||.||| ||| |||| || |||| ||||.|||| ||...||||| |||||
Sbjct 2211 TCAGGATGAGGAAA---TTGAGTC-------AGAC------AAACTTCCACCCAGCAGTTCCCACCATGATCCT 2268
Query 2188 -GAAAAGAGTGGGAAGGATTC------------CTTGGTTTCCATGAAA--TGTT--CATTGTTTC------GG 2238
.|||| ||||| ||||| |.|| |||| ||.| | |.||| .|
Sbjct 2269 CCAAAA----------GATTCTTCCCACACTGACTTGG--TGCA-GAAACTTGCTGGC---GATTCTCAGCAAG 2326
Query 2239 TTCTG----------------------------TCCGTGGTCA-----------AAAGAATTGC---------- 2263
.|||| |||| .|||| ..||||.|||
Sbjct 2327 CTCTGAAGGAGGAAACCTCCAAACCGGAAGCCATCCG-AGTCAGTATCCCTCACCCAGAACTGCCACATCCCCA 2399
Query 2264 ---CTT--------------TCCAGCCTCCGG--AGGGGAG---------CATTTCTTCACACCTAGGA----- 2304
||| ..|||||.|.|| ||||||| |.||.||| |||||.|
Sbjct 2400 AGACTTAGCAACAGATACCAAGCAGCCCCAGGCCAGGGGAGCCCCGGGGACCTTGCTT----CCTAGAAGCCGG 2469
Query 2305 --------------------------TCAGGAG-----------CCAGTGACAGTGAGACCGAAGAGACCCGGA 2341
|||||.| ||||.| ||| |||.|| .|.|||| |
Sbjct 2470 CTGGCTCCCACTCGGCTGCCCCAGCCTCAGGTGCTGGCTCCCCTCCAGAG-CAG-GAGGCC---CACACCC--A 2536
Query 2342 AAGCACTACCTAT--------------------------ACAATCATTTTCACATGAAA--AAGA--GTCT--- 2382
| ||| ||||| ||||.| ||.|||.||| |.|| ||||
Sbjct 2537 A---ACT-CCTATCGCCCAGCAGGGAAGAGGCTTTAGGAACAACC----TCCCATCAAACCATGACGGTCTCTC 2602
Query 2383 ---------CACCAAC-------ACAGACA-----ACACTCGGTCCCAGTCATCAGTCGCCCAGGTTCC-AACG 2434
||||||| .|||||| |.|||...||||| ||| |||| ||| .||
Sbjct 2603 CCAGGCTTCCACCAACCCGGGAAGCAGACACCAGTAAACTTCCTCCCA-TCA------GCCC----TCCGCAC- 2664
Query 2435 TCAAACCCACCCTCCC---TCCAATCCCTCAGG--GCC-----------GCAGG-------------------- 2472
|||||.||||| .|| ||..|.|||.|||| ||| |||.|
Sbjct 2665 TCAAAACCACC--ACCAAATCTGAGCCCCCAGGCAGCCCACAGTCTTCAGCAAGTCCAGGAAGAGAAGGTCAGT 2736
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 2737 GAGGTGAAACTCCCTCTTATCAGTCCCCCCAGCCAGGAGCAAGCAGAACCTCGCATCCTCAGTCCCGCCCAGGA 2810
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 2811 GGAGGCGGCTCAGAAAGTGAGGCTCCCTCGCATTCCTGCTCCTCTTCCGGAGCCAGGGCTGCCCCAGAACTCGG 2884
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 2885 GGACTCAGCCTGATCCAAGGCCTGCAAAGGAAAGGAAAGCTCCCCAAGCAGGCAGCTCCTCCAGGAGGAAGATT 2958
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 2959 CCAGACATGCGGGCCTCACCCCACAACCAGGGGCCACTTCAGCAGACAGGGGCTAGGGAAAAAAAGCTCCCCAA 3032
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 3033 CCAGAAAGGGACGGCTAGAGGACTGGCACCTCTGGAAGAGGCACCACCTGGGAACCACCAGCCAGCCTTGCAGC 3106
Query 2473 -------------------------------------------------------------------------- 2472
Sbjct 3107 TAGAACCCCACGATCAGCCAGCTCCCACCATGGTGCCCGACGATCCCAACCCCAGCCCTCCTCTTGTTTCTTGT 3180
Query 2473 ------ 2472
Sbjct 3181 CTAAGC 3186