Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15297
- Subject:
- XM_006530394.3
- Aligned Length:
- 2505
- Identities:
- 1742
- Gaps:
- 561
Alignment
Query 1 ATGACGGATGAACAGGTGTGCGAGACTGTGGAGAAATACGGAGCCAACCGGGAGGAGTGTGCCCGCCTCAACGC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCCCTCTCCTGCCTCAGGAATGTCCACATGTCAGGAGGCAACCTTTCCAAACAAGACTGGACCATCCAGTGGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCACCACAGAGACGGGGAAGGAGAACAATCCCGTGTGCCCCCCGGAGCCCACCCCGTGGATCCGCACCCATCTC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TCCCAGAGCCCCAGGGTCCCGTCCAAGTGCGTCCAGCACTATTGTCACACCAGCCCCACTCCCGGGGCCCCTGT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GTACACCCACGTGGACAGGCTTACCGTGGACGCCTACCCGGGCTTGTGCCCGCCCCCGCCACTGGAGTCGGGCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACCGTTCCCTGCCCCCATCGCCCCGGCAGCGGCACGCGGTCCGCACCCCGCCGCGCACCCCCAACATCGTCACC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ACCGTGACCCCGCCGGGCACGCCGCCCATGAGGAAGAAGAACAAGCTGAAGCCCCCGGGGA-------CCCCAC 511
||| |.|||.| |||.|.||| ||.||
Sbjct 1 ---------------------------ATG-------------ATCTGCA--CCCTGTGGAGGTTGGTCCTCA- 31
Query 512 CGCCCTCCTCCCGAAAACTGATACACTTGATCCCGGGATTCACCGCGCTGCATCGGAGCAAATCCCACGAGT-T 584
|||||..|||| ||.| ||.|.||.|| |||| |
Sbjct 32 -GCCCTAGTCCC--AAGC-----------------------------CTCCTTCAGA-----------GAGTCT 62
Query 585 CCAGCTGGGGCACCGC-GTGGACGAG-GCCCACACGCCCAA-------AGCCAAGAAG-AGAGCAAACCCTTGA 648
.||.|.||..||||.| |.|| |||| | || |||||||||| |||||||||||||||
Sbjct 63 ACACCAGGCCCACCACAGAGG-CGAGAG-----------AATTTTTGGAGCCAAGAAGAAGAGCAAACCCTTGA 124
Query 649 ACCTCAAGATCCACAGCAGCGTAGGCAGCTGCGAGAACATCCCCTCTCAGCAGCGCTTCCCGCTGCTGTCCGAG 722
|||||||||||||||||.||||.|||||||||||||||||||||.|.|||||.||||..|||||.|||||||||
Sbjct 125 ACCTCAAGATCCACAGCGGCGTGGGCAGCTGCGAGAACATCCCCGCCCAGCAACGCTCTCCGCTCCTGTCCGAG 198
Query 723 CGCTCCCTCCGCTCCTTCTTTGTGGGACACGCACCTTTCCTGCCTTCCACCCCTCCTGTTCACACTGAGGCCAA 796
||||||.|.||.||||||||||||||.||||..||.||||||||.||||||||.|||||.||||||||.|||||
Sbjct 199 CGCTCCTTGCGGTCCTTCTTTGTGGGCCACGGGCCCTTCCTGCCCTCCACCCCACCTGTCCACACTGAAGCCAA 272
Query 797 CTTCTCTGCAAACACACTGTCAGTGCCACGCTGGTCCCCGCAGATCCCTCGCAGAGATCTCGGCAACTCCATCA 870
.|||||||||||||||||.||.||.||.||||||||.||.||||||||.||||||||.||.|||||.|||||||
Sbjct 273 TTTCTCTGCAAACACACTCTCTGTACCTCGCTGGTCACCACAGATCCCACGCAGAGACCTTGGCAATTCCATCA 346
Query 871 AGCACAGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACAGTCTGTGGGAAAGGGATGCTTTTTGGCCTC 944
|||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||
Sbjct 347 AGCACAGGTTTTCCACCAAGTACTGGATGTCTCAGACGTGCACGGTCTGCGGGAAAGGGATGCTTTTTGGCCTC 420
Query 945 AAGTGTAAAAACTGCAAGTTAAAGTGCCACAACAAATGCACCAAAGAAGCCCCACCCTGTCATCTTCTGATCAT 1018
||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||.||.|||||.||
Sbjct 421 AAGTGTAAAAACTGCAAGTTAAAGTGCCACAATAAATGCACCAAAGAAGCCCCGCCCTGTCACCTCCTGATTAT 494
Query 1019 CCACCGAGGAGATCCAGCAAGGTTAGTCCGGACAGAGTCCGTTCCGTGTGACATCAACAACCCTCTACGGAAGC 1092
||||||||||||.||||||||||||||.||.||.|||||.||.||.|||||||||||||||||..|.|||||||
Sbjct 495 CCACCGAGGAGACCCAGCAAGGTTAGTGCGAACGGAGTCGGTGCCCTGTGACATCAACAACCCGGTCCGGAAGC 568
Query 1093 CACCTCGCTATTCAGACCTGCACATCAGTCAGACGCTCCCCAAAACCAACAAAATCAACAAGGACCACATCCCT 1166
|..|.||.||||||||.||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 569 CTGCCCGATATTCAGATCTCCACATCAGTCAGACTCTCCCCAAAACCAACAAAATCAACAAGGACCACATCCCT 642
Query 1167 GTCCCTTACCAGCCAGACTCCAGCAGCAACCCCTCCTCCACGACGTCCTCCACGCCCTCCTCGCCAGCACCCCC 1240
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.||||||||
Sbjct 643 GTCCCTTACCAGCCAGACTCCAGCAGCAATCCCTCCTCCACGACGTCCTCCACGCCCTCCTCACCGGCACCCCC 716
Query 1241 CCTCCCTCCTAGTGCCACGCCGCCTTCTCCCCTACACCCTTCCCCACAGTGCACACGGCAGCAGAAGAACTTCA 1314
|||||||||.||.||||||||||||||||||||.|||||.|||||.||||||.|..|.|||.|.||||||||||
Sbjct 717 CCTCCCTCCCAGCGCCACGCCGCCTTCTCCCCTGCACCCCTCCCCGCAGTGCCCGAGACAGAAAAAGAACTTCA 790
Query 1315 ACCTGCCAGCATCCCACTACTACAAATACAAGCAGCAGTTCATCTTCCCAGATGTGGTGCCGGTGCCGGAGACG 1388
||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.||.||.|||||.
Sbjct 791 ACCTGCCAGCTTCCCACTACTACAAATACAAGCAACAGTTCATCTTCCCAGATGTGGTGCCTGTACCAGAGACA 864
Query 1389 CCGACCCGGGCGCCCCAGGTCATCCTGCATCCGGTGACCTCGAATCCAATCTTGGAAGGAAATCCATTACTTCA 1462
||.||||||||.|||||.||||||||||||||.||.|||||.|||.||||||||||||||||.|||||||||||
Sbjct 865 CCCACCCGGGCACCCCAAGTCATCCTGCATCCTGTCACCTCAAATACAATCTTGGAAGGAAACCCATTACTTCA 938
Query 1463 AATTGAAGTGGAGCCAACGTCGGAGAATGAAGAGGTCCATGATGAGGCCGAAGAGTCAGAGGATGACTTCGAGG 1536
||||||||||||.|||||.||.|||||.||||||..|||..||||.||.||.|||||.|||||.||.||.||.|
Sbjct 939 AATTGAAGTGGAACCAACCTCCGAGAACGAAGAGAGCCACAATGAAGCAGAGGAGTCCGAGGACGAGTTTGAAG 1012
Query 1537 AGATGAACCTGTCCCTCCTCTCGGCCCGGAGCTTCCCACGCAAGGCCAGCCAGACCAGCATCTTCCTTCAGGAG 1610
||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1013 AGATGAACCTATCCCTCCTCTCAGCCCGGAGCTTCCCACGCAAAGCCAGCCAGACCAGCATCTTCCTTCAGGAG 1086
Query 1611 TGGGACATCCCCTTTGAGCAGCTGGAGATCGGCGAGCTCATTGGAAAGGGCCGCTTTGGGCAAGTGTACCACGG 1684
|||||||||||.|||||.|||||.|||||.|||||||||||.||.|||||.|||||.|||||.||.||||||||
Sbjct 1087 TGGGACATCCCGTTTGAACAGCTAGAGATTGGCGAGCTCATCGGGAAGGGTCGCTTCGGGCAGGTTTACCACGG 1160
Query 1685 CCGCTGGCATGGCGAGGTGGCCATCCGGCTGATTGACATTGAGAGGGACAACGAGGACCAGCTCAAGGCCTTCA 1758
.||||||||.||||||||||||||||||.||||||||||.|||||||||||.|||||||||||.||||||||||
Sbjct 1161 ACGCTGGCACGGCGAGGTGGCCATCCGGTTGATTGACATAGAGAGGGACAATGAGGACCAGCTTAAGGCCTTCA 1234
Query 1759 AGCGGGAGGTGATGGCCTACAGGCAGACACGGCATGAGAACGTGGTGCTTTTCATGGGTGCCTGCATGAGCCCG 1832
|||||||.||||||||||||||||||||..||||.||||||||||||||.||||||||.||||||||||||||.
Sbjct 1235 AGCGGGAAGTGATGGCCTACAGGCAGACGAGGCACGAGAACGTGGTGCTCTTCATGGGAGCCTGCATGAGCCCA 1308
Query 1833 CCTCACCTGGCCCATCATCACCAGCCTCTGTAAGGGACGGACGCTCTATTCCGTTGTGAGGGATGCCAAAATCG 1906
||.|||.||| |||||||||||||||||||||||||||||||.|||||.||.||.||||||||.|||||.||.|
Sbjct 1309 CCCCACTTGG-CCATCATCACCAGCCTCTGTAAGGGACGGACACTCTACTCTGTGGTGAGGGACGCCAAGATTG 1381
Query 1907 TTTTGGATGTCAACAAAACCAGGCAGATTGCTCAAGAAATTGTGAAGGGCATGGGCTACCTCCACGCCAAGGGA 1980
|.||||||||||||||||||||||||||.||.|||||.|||||.|||||||||||||||||||||||||||||.
Sbjct 1382 TCTTGGATGTCAACAAAACCAGGCAGATCGCGCAAGAGATTGTAAAGGGCATGGGCTACCTCCACGCCAAGGGG 1455
Query 1981 ATCCTACACAAGGACCTCAAGTCAAAGAACGTCTTCTATGACAACGGCAAAGTGGTCATCACGGACTTTGGACT 2054
|||||.||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||.||||||||.||
Sbjct 1456 ATCCTTCATAAGGACCTCAAATCGAAGAACGTCTTCTATGACAACGGCAAAGTGGTCATCACAGACTTTGGGCT 1529
Query 2055 CTTCAGCATTTCTGGGGTGCTGCAGGCTGGCAGGCGGGAGGACAAACTGCGCATCCAGAATGGCTGGCTATGCC 2128
||||||||||||.||||||||||||||||||.|||||||.|||||||||||.||||||||.||||||||.||.|
Sbjct 1530 CTTCAGCATTTCCGGGGTGCTGCAGGCTGGCCGGCGGGACGACAAACTGCGGATCCAGAACGGCTGGCTGTGTC 1603
Query 2129 ACCTGGCACCAGAGATCATCCGCCAGCTGTCCCCCGACACAGAGGAGGATAAGCTCCCCTTCTCCAAGCACTCT 2202
|||||||.|||||.||||||||||||||||||||.||||||||.|||||.||||||||.||||||||||||||.
Sbjct 1604 ACCTGGCCCCAGAAATCATCCGCCAGCTGTCCCCTGACACAGAAGAGGACAAGCTCCCATTCTCCAAGCACTCG 1677
Query 2203 GACGTCTTTGCCCTTGGCACAATCTGGTATGAACTCCACGCCAGGGAATGGCCTTTCAAGACCCAACCAGCAGA 2276
||.||||||||.||||||||.|||||||||||.||||||||||||||.|||||.||||||||||||||||||||
Sbjct 1678 GATGTCTTTGCGCTTGGCACCATCTGGTATGAGCTCCACGCCAGGGAGTGGCCATTCAAGACCCAACCAGCAGA 1751
Query 2277 GGCAATAATCTGGCAAATGGGCACAGGCATGAAACCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGG 2350
||||||.||.|||||.||||||||.||.|||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1752 GGCAATCATTTGGCAGATGGGCACGGGAATGAAGCCCAACCTCAGCCAGATTGGCATGGGAAAAGAAATCTCGG 1825
Query 2351 ACATTCTTCTCTTCTGCTGGGCCTTTGAACAAGAAGAGAGACCTACCTTCACCAAGCTCATGGACATGCTGGAG 2424
||||.||.|||||||||||||||||.||.||.||||||.|.||.|||||.||||||||||||||||||||.|||
Sbjct 1826 ACATACTGCTCTTCTGCTGGGCCTTCGAGCAGGAAGAGCGGCCCACCTTTACCAAGCTCATGGACATGCTAGAG 1899
Query 2425 AAACTGCCAAAGCGAAACCGTCGCCTGTCTCACCCTGGACATTTCTGGAAGTCTGCAGAGCTG 2487
||||||||||||||||||||.||||||||.|||||.|||||||||||||||||||||||||||
Sbjct 1900 AAACTGCCAAAGCGAAACCGCCGCCTGTCGCACCCCGGACATTTCTGGAAGTCTGCAGAGCTG 1962
