Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15298
Subject:
XR_428160.3
Aligned Length:
2342
Identities:
193
Gaps:
2148

Alignment

Query    1  ATGGAGAAGTACGAGCGGATCCGAGTGGTGGGGAGAGGTGCCTTCGGGATTGTGCACCTGTGCCTGCGAAAGGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGACCAGAAGCTGGTGATCATCAAGCAGATTCCAGTGGAACAGATGACCAAGGAAGAGCGGCAGGCAGCCCAGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATGAGTGCCAGGTCCTCAAGCTGCTCAACCACCCCAATGTCATTGAGTACTACGAGAACTTCCTGGAAGACAAA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GCCCTTATGATCGCCATGGAATATGCACCAGGCGGCACTCTGGCTGAGTTCATCCAAAAGCGCTGTAATTCCCT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GCTGGAGGAGGAGACCATCCTGCACTTCTTCGTGCAGATCCTGCTTGCACTGCATCATGTGCACACCCACCTCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TCCTGCACCGAGACCTCAAGACCCAGAACATCCTGCTTGACAAACACCGCATGGTCGTCAAGATCGGTGATTTC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GGCATCTCCAAGATCCTTAGCAGCAAGAGCAAGGCCTACACGGTGGTGGGTACCCCATGCTATATCTCCCCTGA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GCTGTGTGAGGGCAAGCCCTACAACCAGAAGAGTGACATCTGGGCCCTGGGCTGTGTCCTCTACGAGCTGGCCA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  GCCTCAAGAGGGCTTTCGAGGCTGCGAACTTGCCAGCACTGGTGCTGAAGATCATGAGTGGCACCTTTGCACCT  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  ATCTCTGACCGGTACAGCCCTGAGCTTCGCCAGCTGGTCCTGAGTCTACTCAGCCTGGAGCCTGCCCAGCGGCC  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  ACCACTCAGCCACATCATGGCACAGCCCCTCTGCATCCGTGCCCTCCTCAACCTCCACACCGACGTGGGCAGTG  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  TCCGCATGCGGAGGGCAGAGAAGTCCGTGGCCCCCAGCAACACAGGGAGCAGGACCACCAGTGTCCGCTGCAGA  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  GGTATCCCCCGGGGACCTGTGAGGCCAGCCATCCCACCACCACTGTCGTCAGTGTATGCCTGGGGTGGTGGGCT  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  GGGCACCCCCCTGCGGCTGCCAATGCTCAACACAGAGGTGGTCCAGGTGGCAGCTGGGCGCACGCAGAAAGCCG  1036
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1037  GCGTCACGCGCTCTGGGCGTCTCATCCTGTGGGAGGCCCCACCCCTAGGTGCAGGCGGAGGCAGTCTCCTTCCT  1110
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1111  GGGGCAGTGGAGCAGCCACAGCCCCAGTTCATCTCGCGTTTCCTGGAGGGCCAGTCGGGTGTGACCATCAAGCA  1184
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1185  CGTGGCCTGTGGGGACTTCTTCACTGCCTGCCTGACTGACAGAGGCATCATCATGACATTCGGCAGCGGCAGCA  1258
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1259  ATGGGTGCCTAGGCCATGGCAGCCTCACTGACATCAGCCAGCCCACCATTGTGGAGGCTTTGCTGGGCTATGAA  1332
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1333  ATGGTGCAGGTGGCCTGTGGGGCCTCTCACGTGCTGGCCCTGTCCACTGAGCGAGAACTATTTGCCTGGGGCCG  1406
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1407  TGGAGACAGCGGCAGACTGGGGCTAGGCACCAGGGAGTCCCACAGCTGCCCCCAGCAGGTGCCCATGCCCCCAG  1480
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1481  GACAGGAAGCTCAGCGAGTTGTATGTGGTATCGATTCCTCCATGATCCTCACTGTGCCTGGCCAAGCCCTAGCC  1554
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1555  TGTGGGAGAAACATCCCAGTCCCGACGATGCAACACGACTGGCCAGTATTAAGCCTGGGCCCCAAATAATGATT  1628
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1629  TTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAACTTTGTA  1702
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1703  CTATGATTTTATTTTGACTGATANNNANNTNNNCNNCATGGCTTTTTGCCCGCCGTGGCTTNNAACAAATTGAT  1776
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1777  GAGCAATGCTTTTTTATAATGCCAACTTTGTACAAAAAAGTTGGCACCATGGCTTTTTGCCCGCCGTGGCTTTT  1850
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1851  TCCCCCCGCCGCCGCGGCTTTTTGTGGGTTTGTTTTTTTTTGCCGCCGCGGCTTTTTGCCCCGCCGCCGCCGCT  1924
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1925  TTTTGCCGCCGCGGCTTTTTACCCCCGCCGCCGAGGATTTTTGCCCCCGCCGCCGCGGCTCTGAGGGCGGGAGC  1998
                                                                                    ||
Sbjct    1  ------------------------------------------------------------------------GC  2

Query 1999  GGCACACTCGGCTGCCAGCTCCACTGGCGTTCTGGCAAGGGCAGCGCGGAGGGGCGCTCCTGGTCCAGCTCTCC  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    3  GGCACACTCGGCTGCCAGCTCCACTGGCGTTCTGGCAAGGGCAGCGCGGAGGGGCGCTCCTGGTCCAGCTCTCC  76

Query 2073  CTGCTCGGGAGTGTATGAATGCTTTGTGTTCTGACAAAGAGACTGTAGCTCCCATGTCCTACCTGCTTGGTTGC  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   77  CTGCTCGGGAGTGTATGAATGCTTTGTGTTCTGACAAAGAGACTGTAGCTCCCATGTCCTACCTGCTTGGTTGC  150

Query 2147  ATTGCCAGTGCCCACGTCATTGCTTATTTAAAATCTACAACTGC------------------------------  2190
            |||||||||||||||||||||||||.||||||||||||||||||                              
Sbjct  151  ATTGCCAGTGCCCACGTCATTGCTTGTTTAAAATCTACAACTGCTGACGTTTTGTAACCTTCGCATTCCAGATA  224

Query 2191  --------------------------------------------------------------------------  2190
                                                                                      
Sbjct  225  CAACAGAGAAATGCATAATGTCCAGTGAATTTATTAAAGTTCCAAAGTCGGTCGCGCGCAGTGGCTCACGCCTG  298

Query 2191  ------------------------------------------------  2190
                                                            
Sbjct  299  TAATCTCAACACTTCGGGAGGCCGAGGCGTGTGGATCACGAGGTCAGG  346

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