Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15308
- Subject:
- NR_144520.1
- Aligned Length:
- 1738
- Identities:
- 942
- Gaps:
- 793
Alignment
Query 1 --------------------------------------------------------ATGGAAAAGTATGAAAAA 18
||||||||||||||||||
Sbjct 1 GTGCAGCATTGTACTGCAAGTCAATCGATACAATAATTTAAGTCACTTCAGCTATAATGGAAAAGTATGAAAAA 74
Query 19 TTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAACCTCTGGACAAGTAGTAGC 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTAGCTAAGACTGGAGAAGGGTCTTATGGGGTTGTATTCAAATGCAGAAACAAAACCTCTGGACAAGTAGTAGC 148
Query 93 TGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAAGAGAAATACGTATGTTGA 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGTTAAAAAATTTGTGGAATCTGAAGATGATCCTGTTGTTAAGAAAATAGCACTAAGAGAAATACGTATGTTGA 222
Query 167 AGCAAATTAAAACAATNCCAAATCTTGTGAACCTCATCGAAGGTGTTCAGGAGAAAAAAGGAAAATGCATTTAG 240
||| |||||||||| .|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 223 AGC-AATTAAAACA--TCCAAATCTTGTGAACCTCATCG-AGGTGTTCAGGAG-AAAAAGGAAAATGCATTTAG 291
Query 241 TTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGAGTTGCTGATGGAGTGATC 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 TTTTTGAATACTGTGATCATACACTTTTAAATGAGCTGGAAAGAAACCCAAATGGAGTTGCTGATGGAGTGATC 365
Query 315 AAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTGTATTCACAGAGATATAAA 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 AAAAGCGTATTATGGCAAACACTTCAAGCTCTTAATTTCTGTCATATACATAACTGTATTCACAGAGATATAAA 439
Query 389 ACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGTTTGCACAAATTCTGA--- 459
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 ACCTGAAAATATTCTAATAACTAAGCAAGGAATAATCAAGATTTGTGACTTCGGGTTTGCACAAATTCTGAGTT 513
Query 460 -------------------------------------------------------------------------- 459
Sbjct 514 GGACTTCATCTTTCTCTGGTGCCTCCTTGATTGGCTTAATAGTTGACCTTCTGAATTCTTTTTCTGCCAATTCA 587
Query 460 --------------------------------TTCCAGGAGATGCCTACACCGATTATGTAGCTACGAGATGGT 501
||||||||||||||||||||||||||||||||||||||||||
Sbjct 588 GAGATTTTTCTCCTGGCTTGGATCCATTGCTGTTCCAGGAGATGCCTACACCGATTATGTAGCTACGAGATGGT 661
Query 502 ACCGAGCTCCTGAACTTCTTGTGGGAGATACTCAGTATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTT 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 ACCGAGCTCCTGAACTTCTTGTGGGAGATACTCAGTATGGTTCTTCAGTCGATATATGGGCTATTGGTTGTGTT 735
Query 576 TTTGCAGAGCTCCTGACAGGCCAGCCACTGTGGCCTGGAAAATCAGATGTGGACCAACTTTATCTGATAATCAG 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 TTTGCAGAGCTCCTGACAGGCCAGCCACTGTGGCCTGGAAAATCAGATGTGGACCAACTTTATCTGATAATCAG 809
Query 650 AACACTAGGAAAATTAATCCCAAGACATCAATCAATCTTTAAAAGTAACGGGTTTTTCCATGGCATCAGTATAC 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 810 AACACTAGGAAAATTAATCCCAAGACATCAATCAATCTTTAAAAGTAACGGGTTTTTCCATGGCATCAGTATAC 883
Query 724 CTGAGCCAGAAGACATGGAAACTCTTGAGGAAAAGTTCTCAGATGTTCATCCTGTGGCTTCTGAACTTCATGAA 797
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 884 CTGAGCCAGAAGACATGGAAACTCTTGAGGAAAAGTTCTCAGATGTTCATCCTGTGGC-TCTGAACTTCATGAA 956
Query 798 NGGNTGTCTGAAGATGAATCCAGATGACAGATTAACCTGTTCCCAACTCCTGGAGAGCTCCTACTTTGATTCTT 871
.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 GGGGTGTCTGAAGATGAATCCAGATGACAGATTAACCTGTTCCCAACTCCTGGAGAGCTCCTACTTTGATTCTT 1030
Query 872 TTCAAGAGGCCCAAATTAAAAGAAAAGCACGTAATGAAGGAAGAAACAGAAGACGCCAACAGGTACTTCCGCTC 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 TTCAAGAGGCCCAAATTAAAAGAAAAGCACGTAATGAAGGAAGAAACAGAAGACGCCAACAGGTACTTCCGCTC 1104
Query 946 AAAAGT-------------------------------------------------------------------- 951
||||||
Sbjct 1105 AAAAGTTAAAGTGCTATAAAAATAATTCCTTTTTTGTTTTTGTTTGTCTGCCTTTCAAAGTGAGACAAGGTGGA 1178
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1179 CACCAAGACCTTTCATTTGTACTGGTGTAGTTGTATTTGTCTAGCTTAATAAATATTGGTAATTGATGTAATAA 1252
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1253 AACCATAGAACTATGAAAATATCAAGATTATTGCAAAAATCTTATTCCAAACACACCTGAATCAAATCGTTACG 1326
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1327 CAACTCTTTGGCTGCTCTGATTGGATATCCCACCCACAAGATCGTATACCCATAATATAACAACTTCATATAAT 1400
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1401 AAAATGCTGATTCCAACAGGACTGAGTTTTGCCAGCATTGCAAAGGAATCCAAGTGCCTTTCTGTAGCCTCCAG 1474
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1475 ATGTGCAATAACGGTAACTTGACTCTTCCATCTTTTCACCCACAGCAGGCACCTAAGTCTGCCTTTCCTAGGCT 1548
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1549 TTTTCTCAAAACCAAGATCTGCCAGGTACAAAGGAATGAAACCCAGACATCTGGGAACCAAATTCTACCCAATG 1622
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1623 GGCCAATATTGCAGAACAGTATGGTGACTGTTATGACAAACATTAATTCTGCAGTTTATCAGGTGACTGTCCTT 1696
Query 952 ------------------------------------ 951
Sbjct 1697 CACTTGCTTTCAGAAAACTTTGAAGTTAAATCGTAA 1732
