Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15331
- Subject:
- NR_135751.1
- Aligned Length:
- 2698
- Identities:
- 1249
- Gaps:
- 1447
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGAGGGGGCTACATCCCCGGCTTTAGACGCGCGAGTCTCAGGTCCCGCTAATTACCTGGCGGGTGCTGCCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTGCCCTCGCGCACCTAGCGCGGTGGCAGGCGGGAAGGCGGGGCCTGGGGGAGCCCCACCCCTGGAGACTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTGGGGCCTCCCTCTCCTCCGCCCGCCCGCCTGCCACTAGCTCATTGCGCCTCTCCTGCAGTCTGATTGGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGGCTCCCATTCCGGCTCCAGCCTCCAATCCGACCCCCATTTCGGCTGCAGCCTCGGACCTAGCTCCGGCCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGTCTATCCGGTTGCATCCTCCCTCCCTGTTCCGGATCTTATCTTGCGCCAGCGCCTACTCCAGGATCCCGTA 370
Query 1 ---------------ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTT 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCAGACCTCAAGCCATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTT 444
Query 60 GGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCTGCCAGTGAACGACGGA 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCTGCCAGTGAACGACGGA 518
Query 134 GGCTGTATCCCCCG------------------------------------------------------------ 147
||||||||||||||
Sbjct 519 GGCTGTATCCCCCGAGCCAGACATGGCCAACTGGACAGCTCCCAGGTAACTGCACTAGGTCTAGGCGTCTGTGC 592
Query 148 ---------------------------------AGCGCTGAGTACCCAGACCTCCGAAAGCACAACAACTGCAT 188
|||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTCCCTCCATGGTTACTGGGTACCCCCTCCCCAGCGCTGAGTACCCAGACCTCCGAAAGCACAACAACTGCAT 666
Query 189 GGCCAGTCACCTGACCCCAGCAGTCTATGCACGGCTCTGCGACAAGACCACACCCACTGGTTGGACGCTAGATC 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCCAGTCACCTGACCCCAGCAGTCTATGCACGGCTCTGCGACAAGACCACACCCACTGGTTGGACGCTAGATC 740
Query 263 AGTGTATCCAGACTGGCGTGGACAACCCTGGCCACCCCTTCATCAAGACTGTGGGCATGGTGGCTGGAGATGAG 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGTGTATCCAGACTGGCGTGGACAACCCTGGCCACCCCTTCATCAAGACTGTGGGCATGGTGGCTGGAGATGAG 814
Query 337 GAGACCTATGAGGTATTTGCTGACCTGTTTGACCCTGTGATCCAAGAGCGACACAATGGATATGACCCCCGGAC 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAGACCTATGAGGTATTTGCTGACCTGTTTGACCCTGTGATCCAAGAGCGACACAATGGATATGACCCCCGGAC 888
Query 411 AATGAAGCACACCACGGATCTAGATGCCAGTAAAATCCGTTCTGGCTACTTTGATGAGAGGTATGTATTGTCCT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AATGAAGCACACCACGGATCTAGATGCCAGTAAAATCCGTTCTGGCTACTTTGATGAGAGGTATGTATTGTCCT 962
Query 485 CTAGAGTCAGAACTGGCCGAAGCATCCGAGGACTCAGTCTGCCTCCAGCTTGCACTCGAGCAGAGCGACGAGAG 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTAGAGTCAGAACTGGCCGAAGCATCCGAGGACTCAGTCTGCCTCCAGCTTGCACTCGAGCAGAGCGACGAGAG 1036
Query 559 GTGGAACGTGTTGTGGTGGATGCACTGAGTGGCCTGAAGGGTGACCTGGCTGGACGTTACTATAGGCTCAGTGA 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTGGAACGTGTTGTGGTGGATGCACTGAGTGGCCTGAAGGGTGACCTGGCTGGACGTTACTATAGGCTCAGTGA 1110
Query 633 GATGACAGAGGCTGAACAGCAGCAGCTTATTGATGACCACTTTCTGTTTGATAAGCCTGTGTCCCCGTTGCTGA 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GATGACAGAGGCTGAACAGCAGCAGCTTATTGATGACCACTTTCTGTTTGATAAGCCTGTGTCCCCGTTGCTGA 1184
Query 707 CTGCAGCAGGAATGGCTCGAGACTGGCCAGATGCTCGTGGAATTTGGCACAACAATGAGAAGAGCTTCCTGATC 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGCAGCAGGAATGGCTCGAGACTGGCCAGATGCTCGTGGAATTTGGCACAACAATGAGAAGAGCTTCCTGATC 1258
Query 781 TGGGTGAATGAGGAGGATCATACACGGGTGATCTCCATGGAGAAGGGTGGTAACATGAAGAGAGTGTTTGAAAG 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGGTGAATGAGGAGGATCATACACGGGTGATCTCCATGGAGAAGGGTGGTAACATGAAGAGAGTGTTTGAAAG 1332
Query 855 ATTCTGCCGAGGCCTCAAAG------------------------------------------------------ 874
||||||||||||||||||||
Sbjct 1333 ATTCTGCCGAGGCCTCAAAGAGGTTGTTGTGGGGATTAAGTGAAATACAGGTAAAGTACTTGGTCCACAGTAAG 1406
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1407 TGCTTAATAAGTGTTAAAGTGTTAGCTGCAATATTATTCTGGATGGAAGAGTTTCCCCCCATGTTCAGCATGTA 1480
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1481 AGATATCCCCTATGGCATGGTTCCTTCTGAACTATAAAGAGGATCCCTTTACTCATGTTGGGTTGTGGTCTTTG 1554
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1555 TGACCATCATTCTGCTAGATCCCTTGTCTCTTGAACTCTAATAGTCATCTTCATGACTACATGGTTAAGTGAAG 1628
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1629 CCAAACGCCTTCCCCCCGCCCCCTATTCCTATGAATCTGGCTTTTCTGCTCTGTTTTCATCTTTCTCTGCATTC 1702
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1703 ACACAGGTGCTCCGTTCACAGCTAACAGAATGTTATCTTACCTCTTCCTGGCAAAGCTTACACCTTCATCTTCT 1776
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1777 GTCTGAAGGGACCCTTCTAAGCTCTAGGCTCATTAGCAAAGCAAAGATAATCGATGCATGCAGACCTCATTGAA 1850
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1851 TAATCAGTCATCTCTCAGTTCAGTTTACCACCTCTGTTCATTTCCCTAGATCATCCTTAATACACCACTCCTTC 1924
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1925 GAGTTTTCTTCTTCCACATAAGATATTTTTTCACAATCTCATTATTATGCACATCATAATTTTGCATCATGCAT 1998
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1999 GCATGAAAACAATAACAAACCTTTTTCATTTAAAAAAAGACCAATGTCATTCATTCACAGCCAAGTTTCTGTTC 2072
Query 875 -------------------------------------------------------------------------- 874
Sbjct 2073 TAGACATATTTCTAGTGTTCTTGTGGGTCTAGCTAAGGGAGGGTCCAGGGTTAATGAAATATCCCTGATTTTTC 2146
Query 875 -----------------------AGGTGGAGAGACTTATCCAAGAACGTGGCTGGGAGTTCATGTGGAATGAGC 925
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GTTAACAAAACCTTTGTGGACTCAGGTGGAGAGACTTATCCAAGAACGTGGCTGGGAGTTCATGTGGAATGAGC 2220
Query 926 GTTTGGGATACATCTTGACCTGTCCATCTAACCTGGGCACTGGACTTCGGGCAGGAGTGCACATCAAACTGCCC 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GTTTGGGATACATCTTGACCTGTCCATCTAACCTGGGCACTGGACTTCGGGCAGGAGTGCACATCAAACTGCCC 2294
Query 1000 CTGCTAAGCAAAGATAGCCGCTTCCCAAAGATCCTGGAGAACCTAAGACTCCAAAAGCGTGGTACTGGAGGAGT 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 2295 CTGCTAAGCAAAGATAGCCGCTTCCCAAAGATCCTGGAGAACCTAAGACTCCAAAAACGTGGTACTGGAGGAGT 2368
Query 1074 GGACACTGCTGCCACAGGCGGTGTCTTTGATATTTCTAATTTGGACCGACTAGGCAAATCAGAGGTGGAGCTGG 1147
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GGACACTGCTGCTACAGGCGGTGTCTTTGATATTTCTAATTTGGACCGACTAGGCAAATCAGAGGTGGAGCTGG 2442
Query 1148 TGCAACTGGTCATCGATGGAGTAAACTATTTGATTGATTGTGAACGGCGTCTGGAGAGAGGCCAGGATATCCGC 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TGCAACTGGTCATCGATGGAGTAAACTATTTGATTGATTGTGAACGGCGTCTGGAGAGAGGCCAGGATATCCGC 2516
Query 1222 ATCCCCACACCTGTCATCCACACCAAGCAT-------------------------------------------- 1251
||||||||||||||||||||||||||||||
Sbjct 2517 ATCCCCACACCTGTCATCCACACCAAGCATTAACTCCCCATCGCCAGCTGATGACTCAAGATTCCCAGGAGTTC 2590
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2591 TGCTCATTCTAATGATGGCCCATTCTACTTGCTCTGGACCTGCCCCCGCATCCCCTGCCTCCATCCTAGTAAAG 2664
Query 1252 ---------------------------------- 1251
Sbjct 2665 ACTCCTTGCTATGCTGCAAAAAAAAAAAAAAAAA 2698
