Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15340
- Subject:
- NR_146785.2
- Aligned Length:
- 3792
- Identities:
- 317
- Gaps:
- 3474
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAACCCAGCTCTTCCCTACACGGTCGGCACATGCGCGGCAGCTCTTTTCCTTCTTCCTCCACTTCCCCTACCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCACCGTCCGGGAGCCGCCGCCACCGCCGCCGAGGAGTCAGGAAGTTCAAGATGGCCGCCGCGGAGACCCAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCTACGGGAGCAGCCAGAGATGGAAGATGCTAATTCTGAAAAGAGTATAAATGAAGAAAATGGAGAAGTATCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGACCAGTCTCAAAATAAGCACAGTCGTCACAAAAAAAAGAAGCATAAACACAGAAGTAAACATAAGAAACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAAACATTCCTCAGAAGAAGACAAGGATAAAAAACATAAACATAAGCATAAACATAAGAAACACAAAAGAAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGATTATTGATGCTTCTGATAAAGAGGGTATGTCTCCAGCAAAAAGAACTAAACTTGATGATTTAGCTTTGCTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAGACTTGGAAAAACAGAGAGCCTTGATTAAGGCCGAACTTGATAATGAGTTAATGGAAGGAAAGGTCCAGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGTATGGGGCTCATTTTGCAAGGTTATGAGTCTGGCTCTGAAGAAGAGGGGGAAATTCATGAAAAGGCAAGAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGGAAATAGGTCTAGTACTAGATCTTCAAGTACAAAGGGGAAACTTGAACTTGTGGACAATAAAATTACTACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGAAACGAAGTAAAAGCAGATCCAAAGAACGGACTAGACATAGGTCTGATAAAAAGAAAAGTAAGGGGGGTAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAAATCGTTAAAGAGAAAACAACTAGGAGCAAGTCAAAGGAGAGGAAAAAATCTAAAAGCCCATCCAAAAGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTAAGTCTCAAGATCAAGCAAGGAAATCAAAATCCCCTACCCTTAGAAGGCGATCTCAAGAGAAAATTGGTAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCAGATCTCCTACTGATGATAAGGTTAAAATTGAAGATAAAAGTAAATCAAAAGATAGGAAAAAATCCCCAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATAAATGAAAGTAGAAGTCGCGATCGAGGTAAAAAATCCAGATCCCCAGTTGATTTAAGAGGTAAATCCAAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACAGAAGGTCACGGTCCAAAGAGAGAAAATCAAAACGGTCTGAAACTGATAAAGAAAAGAAGCCAATTAAATCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCTCTAAAGATGCTTCATCTGGGAAAGAAAATAGGTCACCCAGCAGAAGACCTGGTCGTAGTCCTAAAAGAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGTTTGTCTCCAAAACCACGTGATAAATCAAGAAGAAGCAGGTCTCCACTTTTGAATGATAGAAGATCTAAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAGCAAATCCCCCTCGCGGACACTGTCTCCTGGGAGAAGAGCCAAGAGCCGATCCTTAGAAAGAAAACGACGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAACCAGAGAGGAGACGACTTTCTTCTCCAAGAACACGACCTCGAGATGATATCCTCAGTAGACGTGAAAGATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAAAGATGCCAGCCCCATCAATAGATGGTCTCCAACCCGAAGAAGAAGTAGATCTCCCATTAGAAGGAGGTCTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTTCCCCACTCAGACGTAGCAGGTCTCCAAGAAGAAGAAGCAGATCTCCTCGGAGAAGGGACAGAGGTCGGAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGCAGATCACGCTTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTAGACGAAGGAGCAGAAGCAAAGTAAAGGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGATAAATTTAAAGGAAGTCTTTCTGAAGGAATGAAAGTTGAGCAGGAATCTTCGTCTGATGATAACCTTGAAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACTTTGATGTAGAGGAAGAAGATGAAGAAGCCCTAATAGAACAGAGAAGAATCCAAAGGCAGGCAATTGTTCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAATATAAATACCTTGCTGAAGATAGCAACATGTCTGTGCCATCTGAACCAAGCAGCCCCCAGAGCAGTACGAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AACACGATCACCATCTCCAGATGACATTCTGGAGCGAGTAGCTGCTGATGTTAAAGAGTATGAACGGGAAAATG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTGATACATTTGAGGCCTCAGTGAAAGCCAAGCATAATCTAATGACAGTTGAACAGAATAATGGTTCATCTCAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAGAAGTTGTTGGCACCTGATATGTTTACAGAATCTGATGATATGTTTGCTGCGTATTTTGATAGTGCTCGTCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCGGGCCGCTGGCATTGGAAAAGATTTCAAAGAGAATCCCAACCTCAGAGATAACTGGACCGATGCAGAAGGCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATTATCGTGTGAACATAGGTGAAGTCCTAGATAAACGTTACAATGTGTATGGCTACACTGGGCAAGGTGTATTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AGTAATGTTGTACGAGCCAGAGATAATGCAAGAGCCAACCAAGAAGTGGCTGTAAAGATCATCAGAAACAATGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCTCATGCAAAAGACTGGTTTAAAAGAATTAGAGTTCTTGAAAAAACTTAATGATGCTGATCCTGATGACAAAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCATTGTCTGAGACTCTTCAGGCACTTCTATCACAAGCAGCATCTTTGTCTGGTATTCGAGCCTCTCAGCATG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AACTTACGAGAGGTGTTAAAAAAATATGGTAAAGATGTTGGTCTTCATATTAAAGCTGTAAGATCCTATAGTCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCAGTTGTTCCTGGCATTGAAACTCCTTAAAAGATGCAATATCCTACATGCAGATATCAAGCCAGACAATATCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGTTAATGAATCCAAAACTATTTTAAAGCTTTGCGATTTTGGGTCGGCTTCACATGTTGCGGATAATGACATA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACACCTTATCTTGTCAGTAGATTTTATCGTGCTCCTGAAATCATTATAGGTAAAAGCTATGACTATGGTATAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TATGTGGTCTGTAGGTTGCACCTTATACGAACTCTATACTGGAAAAATTTTATTCCCTGGCAAAACCAATAACC 2812
Query 1 -----------------ATGGATCTCAAAGGAAAGATGCCAAATAAGATGATTCGAAAAGGTGTGTTCAAAGAT 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 ATATGCTGAAGCTTGCAATGGATCTCAAAGGAAAGATGCCAAATAAGATGATTCGAAAAGGTGTGTTCAAAGAT 2886
Query 58 CAGCATTTTGATCAAAATCTCAACTTCATGTACATAGAAGTTGATAAAGTAACAGAGAGGGAGAAAGTTACTGT 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CAGCATTTTGATCAAAATCTCAACTTCATGTACATAGAAGTTGATAAAGTAACAGAGAGGGAGAAAGTTACTGT 2960
Query 132 TATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATTGGGTGCCAGAGACTTCCTGAAGACCAAC 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATTGGGTGCCAGAGACTTCCTGAAGACCAAC 3034
Query 206 GTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTTGGACCCAGCTAAACGAATTAGCATC 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 GTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTTGGACCCAGCTAAACGAATTAGCATC 3108
Query 280 AACCAGGCCCTACAGCATGCCTTCATCCAGGAAAAAATT----------------------------------- 318
|||||||||||||||||.|||||||||||||||||||||
Sbjct 3109 AACCAGGCCCTACAGCACGCCTTCATCCAGGAAAAAATTTAAACAAGATGAAGAAACTCCAAGGGTTTGAGTAA 3182
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3183 ATACAAAGACTGAAGAAATTTCACAGCAGTTTATTAATGTGTGTGTGTGCAGGCCACAGCAGCATGCCCTTGGT 3256
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3257 GTAGTCAGTGCCGAAAGGGGTCTGTTCCTTCTTGAGCCTGCCTGCAGGGATGGTCTCCTTTTAAAGCAGGTTGT 3330
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3331 GTGCAGCATTCAGTACACTGAAGGCATAAACCTTCCACTCTTGAACAAAGCAGCTGCTTTTTAAAAGCGAGAAA 3404
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3405 AAGGAAAACGGGGCACAGGCCATTCGACGCCTTCTCCAAGGGGTCTGATTTGCTGAGACACCAGCTTCACCTTC 3478
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3479 TTAACAAGGCACCTAATTACAACAAGCATGCACATTTTGGTGCATTCAAGAATGGAAAATCAGAATAGCAGCAT 3552
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3553 TGATTCTTCTGGTGCAGCTCAGTGGAAGATGATGACAACCAGAAGACATGAGCTAAGGGTAAGGGACTGTTCTG 3626
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3627 AAGAACCTTTCCATTTAGTGATCAAGATATGGAAGCTGATTTCTGAAAATGCTCAGTGTGTACTCTAATTATTT 3700
Query 319 -------------------------------------------------------------------------- 318
Sbjct 3701 ATGGTACCATTTGAATTGTAACTTGCATTTTAGCAGTGCATGTTTCTAATTGACTTACTGGGAAACTGAATAAA 3774
Query 319 ------------------ 318
Sbjct 3775 ATATGCCTCTTATTATCA 3792
