Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15340
- Subject:
- XM_017315435.1
- Aligned Length:
- 3021
- Identities:
- 298
- Gaps:
- 2703
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCCGCCACGGAGCCCCCGTCCCTGCGGGAGCAAGCTGAGATGGATGATGCTGATAATTCTGAAAAGAGTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAATGAAGAAAATGGAGAGGTATCAGAAGACCAATCTCAAAATAAACACAGTCGTCACAAAAAAAAGAAGCATA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACACAGAAGTAAACATAAGAAACATAAACATTCCTCAGAAGAAGATAGGGATAAAAAACACAAACATAAGCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGCATAAGAAGCACAAACGGAAAGAAGTTATCGAGGCTTCCGACAAAGAAGGCCTGTCCCCTGCAAAAAGAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAAGCTTGATGATTTAGCTTTGCTGGAAGACTTGGAAAAGCAGAGAGCCTTGATTAAAGCTGAGCTTGATAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTTAATGGAGGGGAAGGTCCAGTCTGGAATGGGGCTCATTTTGCAAGGCTATGAGTCTGGCTCCGAAGAAGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAGAGATTCACGAAAAGGCAAGAAATGGGAACAGGTCCAGTACCAGGTCTTCCAGTACTCGGGGAAAACTTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AATTACGGACAACAAAAATAGTGCAAAGAAACGAAGTAAGAGCAGATCCAAAGAACGGACCAGGCACAGATCGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAAAAGGAAAAGCAAGGGGGCTGGGGAAATGCTGAGAGAGAAAGCAAACAGGAGCAAGTCCAAGGAGAGGAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAATCCAAAAGCCCATCCAAAAGAAGCAAGTCTCAAGACCAAGCTAGAAAGTCAAAGTCCCCTCCACTCAGACG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCGGTCCCAAGAGAAAGTGGGGAAGGCCAGATCTCCTGCTGAGGAGAAGATGAAGAGTGAAGAGAAAGGCAAAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAAAGGATAGGAAAAAATCACCAATTGTAAATGAAAGGAGTCGAGATAGATCTAAAAAATCCAAGTCCCCAGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACTTAAGAGATAAATCCAAAGACAGAAGGTCAAGGTCCAAAGAGCGGAAGTCAAAACGATCTGAAATTGACAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAAAAGAAGCCAATTAAATCACCTTCAAAGGATGCTTCTTCTGGGAAGGAAAATAGGTCACCCAGTAGAAGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGGCCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACTGCGAGACAAGTCAAGAAGAAGTAGGTCTCCGCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCAATGACAGAAGATCTAAGCAGAGCAAATCGCCTTCTCGAACTCTGTCTCCAGGCAGAAGGGCCAAGAGCCG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATCCTTAGAAAGAAAACGGAGAGAACCAGAGAGGAGACGACTTTCTTCTCCGAGAACAAGACCTCGAGATGATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCTTGGTAGATGTGAACGGTCAAAAGATGCCAGCCCCATCAATAGGTGGTCTCCAACCCGAAGAAGAAGTAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTCCAATTAGAAGGAGGTCCCGTTCCCCATTGAGACGCAGCAGGTCTCCTAGAAGAAGAAGCAGGTCTCCTCG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGAAGAGATAGGAGCCGAAGGAGCAGGTCACGCTTGAGGAGAAGGTCTCGATCACGGGGTGGTCATAGGAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGAAGTCTCTCAGAAGGAATGAAAGTTGAGCAAGAGTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCATCTGATGATAACCTTGAAGATTTTGATGTGGAGGAGGAAGATGAAGAGGCTCTAATAGAACAGAGAAGAAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACAGAGGCAAGCAATTGTGCAGAAATATAAATATCTTGCTGAAGATAGCAATATATCTGTGCCATCTGAGCCAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCAGCCCCCAGAGCAGCACAAGATCACGATCTCCTTCGCCAGACGACATCTTGGAGCGAGTTGCTGCTGATGTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAAGAATATGAGCGGGAGAATGTTGACACCTTTGAGGCCTCAGTAAAAGCCAAGCATAATCTAATGACAGTTGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACAGAATAATGGCTCATCTCAGAAGAAGATTTTGGCACCTGACATGTTTACAGAATCTGATGACATGTTTGCTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTATTTTGATAGTGCTCGTCTCCGAGCTGCTGGCATTGGGAAAGATTTCAAAGAAAATCCCAACCTCAGAGAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AATTGGACAGATGCAGAAGGCTATTACCGTGTGAACATCGGGGAAGTCCTAGATAAACGTTATAATGTGTATGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTACACTGGGCAGGGTGTGTTCAGCAATGTTGTGCGTGCCAGGGATAATGCGAGAGCCAACCAGGAAGTGGCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TAAAGATCATCAGGAACAATGAACTCATGCAAAAGACTGGTTTAAAAGAGCTAGAATTCTTGAAAAAACTTAAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GATGCTGATCCTGATGACAAGTTCCATTGCCTGCGCCTCTTCAGACACTTTTACCACAAACAGCACCTCTGTCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGTCTTTGAACCTCTCAGTATGAATTTGCGAGAGGTATTAAAAAAATATGGTAAGGATGTCGGTCTCCATATTA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGCTGTACGATCGTACAGTCAGCAGTTGTTCCTGGCATTGAAACTCCTTAAAAGATGTAATATCTTACATGCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATATCAAACCGGATAATATTCTGGTTAATGAATCCAAAACAATTTTAAAACTTTGTGATTTTGGATCGGCCTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACATGTTGCAGATAATGACATTACGCCTTATCTTGTCAGTAGATTTTATCGTGCTCCGGAGATCATTATAGGTA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAAGCTATGACTACGGTATCGATATGTGGTCTGTAGGTTGTACCTTATATGAACTCTACACTGGAAAAATCTTA 2664
Query 1 ---------------------------------------ATGGATCTCAAAGGAAAGATGCCAAATAAGATGAT 35
|||||.||.||||||||.|||||||||||||||||
Sbjct 2665 TTCCCTGGCAAAACTAATAACCATATGTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGAT 2738
Query 36 TCGAAAAGGTGTGTTCAAAGATCAGCATTTTGATCAAAATCTCAACTTCATGTACATAGAAGTTGATAAAGTAA 109
.||.||||||||.|||||||||||.||||||||.||||||||.|||||||||||||||||.|||||||||||.|
Sbjct 2739 CCGGAAAGGTGTATTCAAAGATCAACATTTTGACCAAAATCTGAACTTCATGTACATAGAGGTTGATAAAGTGA 2812
Query 110 CAGAGAGGGAGAAAGTTACTGTTATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATTGGGTGC 183
||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 CAGAGAGGGAGAAAGTTACTGTCATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATTGGGTGC 2886
Query 184 CAGAGACTTCCTGAAGACCAACGTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTTGGA 257
|||.|||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||.||.||||||||
Sbjct 2887 CAGCGACTTCCTGAAGATCAACGTAAAAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATCCTAATGTTGGA 2960
Query 258 CCCAGCTAAACGAATTAGCATCAACCAGGCCCTACAGCATGCCTTCATCCAGGAAAAAATT 318
|||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||||||
Sbjct 2961 CCCAGCTAAGCGAATTAGCATCAACCAGGCCCTGCAGCATGCATTCATCCAGGAAAAAATT 3021
