Nucleotide Global Alignment

Description

Query:
ccsbBroad304_15379
Subject:
XR_001750612.1
Aligned Length:
1472
Identities:
1039
Gaps:
433

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACAAAGGTGAATGCGGTTCATGAGGCTCGCTTGATTAAGAAGAGCTGAAACAGGAGCAAAGAGCAAAAGGCAAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGCAGCGAAAGCAAGGACTCAGGGAACCGGCAGACACAAGCAGCCTCTGCAGGTGTGCGAGCAGGATTGCTTC  148

Query    1  ----------------------------------------ATGGCCACTTCTTGGGGCACAGTCTTTTTCATGC  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct  149  TGCAACAAAAGCCTCCACCCAGCCACATCTTGGGAAAAGAATGGCCACTTCTTGGGGCACAGTCTTTTTCATGC  222

Query   35  TGGTGGTATCCTGTGTTTGCAGCGCTGTCTCCCACAGGAACCAGCAGACTTGGTTTGAGGGTATCTTCCTGTCT  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGGTGGTATCCTGTGTTTGCAGCGCTGTCTCCCACAGGAACCAGCAGACTTGGTTTGAGGGTATCTTCCTGTCT  296

Query  109  TCCATGTGCCCCATCAATGTCAGCGCCAGCACCTTGTATGGAATTATGTTTGATGCAGGGAGCACTGGAACTCG  182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCCATGTGCCCCATCAATGTCAGCGCCAGCACCTTGTATGGAATTATGTTTGATGCAGGGAGCACTGGAACTCG  370

Query  183  AATTCATGTTTACACCTTTGTGCAGAAAATGCCAGGACAGCTTCCAATTCTAGAAGGGGAAGTTTTTGATTCTG  256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATTCATGTTTACACCTTTGTGCAGAAAATGCCAGGACAGCTTCCAATTCTAGAAGGGGAAGTTTTTGATTCTG  444

Query  257  TGAAGCCAGGACTTTCTGCTTTTGTAGATCAACCTAAGCAGGGTGCTGAGACCGTTCAAGGGCTCTTAGAGGTG  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGAAGCCAGGACTTTCTGCTTTTGTAGATCAACCTAAGCAGGGTGCTGAGACCGTTCAAGGGCTCTTAGAGGTG  518

Query  331  GCCAAAGACTCAATCCCCCGAAGTCACTGGAAAAAGACCCCAGTGGTCCTAAAGGCAACAGCAGGACTACGCTT  404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCAAAGACTCAATCCCCCGAAGTCACTGGAAAAAGACCCCAGTGGTCCTAAAGGCAACAGCAGGACTACGCTT  592

Query  405  ACTGCCAGAACACAAAGCCAAGGCTCTGCTCTTTGAGGTAAAGGAGATCTTCAGGAAGTCACCTTTCCTGGTAC  478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ACTGCCAGAACACAAAGCCAAGGCTCTGCTCTTTGAGGTAAAGGAGATCTTCAGGAAGTCACCTTTCCTGGTAC  666

Query  479  CAAAGGGCAGTGTTAGCATCATGGATGGATCCGACGAAGGCATATTAGCTTGGGTTACTGTGAATTTTCTGACA  552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAAAGGGCAGTGTTAGCATCATGGATGGATCCGACGAAGGCATATTAGCTTGGGTTACTGTGAATTTTCTGACA  740

Query  553  GGTCAGCTGCATGGCCACAGACAGGAGACTGTGGGGACCTTGGACCTAGGGGGAGCCTCCACCCAAATCACGTT  626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGTCAGCTGCATGGCCACAGACAGGAGACTGTGGGGACCTTGGACCTAGGGGGAGCCTCCACCCAAATCACGTT  814

Query  627  CCTGCCCCAGTTTGAGAAAACTCTGGAACAAACTCCTAGGGGCTACCTCACTTCCTTTGAGATGTTTAACAGCA  700
            ||||||||||||||                                                            
Sbjct  815  CCTGCCCCAGTTTG------------------------------------------------------------  828

Query  701  CTTATAAGCTCTATACACATAGTTACCTGGGATTTGGATTGAAAGCTGCAAGACTAGCAACCCTGGGAGCCCTG  774
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  829  --------------------AGTTACCTGGGATTTGGATTGAAAGCTGCAAGACTAGCAACCCTGGGAGCCCTG  882

Query  775  GAGACAGAAGGGACTGATGGGCACACTTTCCGGAGTGCCTGTTTACCGAGATGGTTGGAAGCAGAGTGGATCTT  848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  883  GAGACAGAAGGGACTGATGGGCACACTTTCCGGAGTGCCTGTTTACCGAGATGGTTGGAAGCAGAGTGGATCTT  956

Query  849  TGGGGGTGTGAAATACCAGTATGGTGGCAACCAAGAAGGGGAGGTGGGCTTTGAGCCCTGCTATGCCGAAGTGC  922
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct  957  TGGGGGTGTGAAATACCAGTATGGTGGCAACCAAGAA-------------------------------------  993

Query  923  TGAGGGTGGTACGAGGAAAACTTCACCAGCCAGAGGAGGTCCAGAGAGGTTCCTTCTATGCTTTCTCTTACTAT  996
                                                                                      
Sbjct  994  --------------------------------------------------------------------------  993

Query  997  TATGACCGAGCTGTTGACACAGACATGATTGATTATGAAAAGGGGGGTATTTTAAAAGTTGAAGATTTTGAAAG  1070
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  994  ------------------------------GATTATGAAAAGGGGGGTATTTTAAAAGTTGAAGATTTTGAAAG  1037

Query 1071  AAAAGCCAGGGAAGTGTGTGATAACTTGGAAAACTTCACCTCAGGCAGTCCTTTCCTGTGCATGGATCTCAGCT  1144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1038  AAAAGCCAGGGAAGTGTGTGATAACTTGGAAAACTTCACCTCAGGCAGTCCTTTCCTGTGCATGGATCTCAGCT  1111

Query 1145  ACATCACAGCCCTGTTAAAGGATGGCTTTGGCTTTGCAGACAGCACAGTCTTACAGCTCACAAAGAAAGTGAAC  1218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1112  ACATCACAGCCCTGTTAAAGGATGGCTTTGGCTTTGCAGACAGCACAGTCTTACAGCTCACAAAGAAAGTGAAC  1185

Query 1219  AACATAGAGACGGGCTGGGCCTTGGGGGCCACCTTTCACCTGTTGCAGTCTCTGGGCATCTCCCAT  1284
            ||||||||||||||||||||||||||||||||||||||||||                        
Sbjct 1186  AACATAGAGACGGGCTGGGCCTTGGGGGCCACCTTTCACCTG------------------------  1227

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