Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15439
- Subject:
- NR_027763.2
- Aligned Length:
- 3425
- Identities:
- 1948
- Gaps:
- 1444
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGACGCTGCGGCCTCCTTCTGCCTAGGTCCCAACGCTTCGGGGCAGGGGTGCGGTCTTGCAATAGGAAGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCGTCTTGCAAGCTTCCCGTCGGGCACCAGCTACTCGGCCCCGCACCCTACCTGGTGCATTCCCTAGACACCT 148
Query 1 -------------------------------------------------ATGCCTTTAAACCGCACTTTGTCCA 25
|||||||||||||||||||||||||
Sbjct 149 CCGGGGTCCCTACCTGGAGATCCCCGGAGCCCCCCTTCCTGCGCCAGCCATGCCTTTAAACCGCACTTTGTCCA 222
Query 26 TGTCCTCACTGCCAGGACTGGAGGACTGGGAGGATGAATTCGACCTGGAGAACGCAGTGCTCTTCGAAGTGGCC 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGTCCTCACTGCCAGGACTGGAGGACTGGGAGGATGAATTCGACCTGGAGAACGCAGTGCTCTTCGAAGTGGCC 296
Query 100 TGGGAGGTGGCTAACAAGGTGGGTGGCATCTACAC-GGTGCT-GCAGA-CGA---AGGC-----GAAGGTGACA 162
||||||||||||||||| |||| |.||.| | ||.||| ||.|| ||| |||| |..||||...
Sbjct 297 TGGGAGGTGGCTAACAA---GGGT-GTATTT---CGGGCGCTGGCTGATCGAGGGAGGCCCTCTGGTGGTGCTC 363
Query 163 GGGGACGAATGGGGCGACAACTACTTCCT--GGTGGGGCCGTACACGGAGC------AGGGCG-----TGAGG- 222
..||||| |||| |.||| |.|.|||||.| ||||| ||||.| || ||
Sbjct 364 CTGGACG--TGGG-----------TGCCTCAGCTTGGGCCCT----GGAGCGCTGGAAGGGAGAGCTCTG-GGA 419
Query 223 -ACCCAGGTGGAACTGCTGGAGGCCC------CCACCCC--GGCCCTGAAGAGGACAC---------TGGATTC 278
||| ||.|||..| ||||..|| |.|||.| |||| .|.|||.| |||.||.
Sbjct 420 TACC----TGCAACATC-GGAGTGCCGTGGTACGACCGCGAGGCC-----AACGACGCTGTCCTCTTTGGCTTT 483
Query 279 CATGAACAGCAAG-----GGCTGCAAGTTCCTGGCACAGAGTGAGGAGAAGCCACATGTGGTTGCTCACTTCCA 347
| |||.||.|..| ||.|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 C-TGACCACCTGGTTCCTGGGTG--AGTTCCTGGCACAGAGTGAGGAGAAGCCACATGTGGTTGCTCACTTCCA 554
Query 348 TGAGTGGTTGGCAGGCGTTGGACTCTGCCTGTGTCGTGCCCGGCGACTGCCTGTAGCAACCATCTTCACCACCC 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 TGAGTGGTTGGCAGGCGTTGGACTCTGCCTGTGTCGTGCCCGGCGACTGCCTGTAGCAACCATCTTCACCACCC 628
Query 422 ATGCCACGCTGCTGGGGCGCTACCTGTGTGCCGGTGCCGTGGACTTCTACAACAACCTGGAGAACTTCAACGTG 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 ATGCCACGCTGCTGGGGCGCTACCTGTGTGCCGGTGCCGTGGACTTCTACAACAACCTGGAGAACTTCAACGTG 702
Query 496 GACAAGGAAGCAGGGGAGAGGCAGATCTACCACCGATACTGCATGGAAAGGGCGGCAGCCCACTGCGCTCACGT 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 703 GACAAGGAAGCAGGGGAGAGGCAGATCTACCACCGATACTGCATGGAAAGGGCGGCAGCCCACTGCGCTCACGT 776
Query 570 CTTCACTACTGTGTCCCAGATCACCGCCATCGAGGCACAGCACTTGCTCAAGAGGAAACCAGATATTGTGACCC 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 CTTCACTACTGTGTCCCAGATCACCGCCATCGAGGCACAGCACTTGCTCAAGAGGAAACCAGATATTGTGACCC 850
Query 644 CCAATGGGCTGAATGTGAAGAAGTTTTCTGCCATGCATGAGTTCCAGAACCTCCATGCTCAGAGCAAGGCTCGA 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 851 CCAATGGGCTGAATGTGAAGAAGTTTTCTGCCATGCATGAGTTCCAGAACCTCCATGCTCAGAGCAAGGCTCGA 924
Query 718 ATCCAGGAGTTTGTGCGGGGCCATTTTTATGGGCATCTGGACTTCAACTTGGACAAGACCTTATACTTCTTTAT 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 ATCCAGGAGTTTGTGCGGGGCCATTTTTATGGGCATCTGGACTTCAACTTGGACAAGACCTTATACTTCTTTAT 998
Query 792 CGCCGGCCGCTATGAGTTCTCCAACAAGGGTGCTGACGTCTTCCTGGAGGCATTGGCTCGGCTCAACTATCTGC 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 999 CGCCGGCCGCTATGAGTTCTCCAACAAGGGTGCTGACGTCTTCCTGGAGGCATTGGCTCGGCTCAACTATCTGC 1072
Query 866 TCAGAGTGAACGGCAGCGAGCAGACAGTGGTTGCCTTCTTCATCATGCCAGCGCGGACCAACAATTTCAACGTG 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 TCAGAGTGAACGGCAGCGAGCAGACAGTGGTTGCCTTCTTCATCATGCCAGCGCGGACCAACAATTTCAACGTG 1146
Query 940 GAAACCCTCAAAGGCCAAGCTGTGCGCAAACAGCTTTGGGACACGGCCAACACGGTGAAGGAAAAGTTCGGGAG 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147 GAAACCCTCAAAGGCCAAGCTGTGCGCAAACAGCTTTGGGACACGGCCAACACGGTGAAGGAAAAGTTCGGGAG 1220
Query 1014 GAAGCTTTATGAATCCTTACTGGTTGGGAGCCTTCCCGACATGAACAAGATGCTGGATAAGGAAGACTTCACTA 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221 GAAGCTTTATGAATCCTTACTGGTTGGGAGCCTTCCCGACATGAACAAGATGCTGGATAAGGAAGACTTCACTA 1294
Query 1088 TGATGAAGAGAGCCATCTTTGCAACGCAGCGGCAGTCTTTCCCCCCTGTGTGCACCCACAATATGCTGGATGAC 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1295 TGATGAAGAGAGCCATCTTTGCAACGCAGCGGCAGTCTTTCCCCCCTGTGTGCACCCACAATATGCTGGATGAC 1368
Query 1162 TCCTCAGACCCCATCCTGACCACCATCCGCCGAATCGGCCTCTTCAATAGCAGTGCCGACAGGGTGAAGGTGAT 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369 TCCTCAGACCCCATCCTGACCACCATCCGCCGAATCGGCCTCTTCAATAGCAGTGCCGACAGGGTGAAGGTGAT 1442
Query 1236 TTTCCACCCGGAGTTCCTCTCCTCCACAAGCCCCCTGCTCCCTGTGGACTATGAGGAGTTTGTCCGTGGCTGTC 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 TTTCCACCCGGAGTTCCTCTCCTCCACAAGCCCCCTGCTCCCTGTGGACTATGAGGAGTTTGTCCGTGGCTGTC 1516
Query 1310 ACCTTGGAGTCTTCCCCTCCTACTATGAGCCTTGGGGCTACACACCGGCTGAGTGCACGGTTATGGGAATCCCC 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1517 ACCTTGGAGTCTTCCCCTCCTACTATGAGCCTTGGGGCTACACACCGGCTGAGTGCACGGTTATGGGAATCCCC 1590
Query 1384 AGTATCTCCACCAATCTCTCCGGCTTCGGCTGCTTCATGGAGGAACACATCGCAGACCCCTCAGCTTACGGTAT 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1591 AGTATCTCCACCAATCTCTCCGGCTTCGGCTGCTTCATGGAGGAACACATCGCAGACCCCTCAGCTTACGGTAT 1664
Query 1458 CTACATTCTTGACCGGCGGTTCCGCAGCCTGGATGATTCCTGCTCGCAGCTCACCTCCTTCCTCTACAGTTTCT 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1665 CTACATTCTTGACCGGCGGTTCCGCAGCCTGGATGATTCCTGCTCGCAGCTCACCTCCTTCCTCTACAGTTTCT 1738
Query 1532 GTCAGCAGAGCCGGCGGCAGCGTATCATCCAGCGGAACCGCACGGAGCGCCTCTCCGACCTTCTGGACTGGAAA 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 GTCAGCAGAGCCGGCGGCAGCGTATCATCCAGCGGAACCGCACGGAGCGCCTCTCCGACCTTCTGGACTGGAAA 1812
Query 1606 TACCTAGGCCGGTACTATATGTCTGCGCGCCACATGGCGCTGTCCAAGGCCTTTCCAGAGCACTTCACCTACGA 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1813 TACCTAGGCCGGTACTATATGTCTGCGCGCCACATGGCGCTGTCCAAGGCCTTTCCAGAGCACTTCACCTACGA 1886
Query 1680 GCCCAACGAGGCGGATGCGGCCCAGGGGTACCGCTACCCACGGCCAGCCTCGGTGCCACCGTCGCCCTCGCTGT 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1887 GCCCAACGAGGCGGATGCGGCCCAGGGGTACCGCTACCCACGGCCAGCCTCGGTGCCACCGTCGCCCTCGCTGT 1960
Query 1754 CACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAGGATCCCCGGAACGGGCCGCTGGAGGAAGACGGCGAG 1827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1961 CACGACACTCCAGCCCGCACCAGAGTGAGGACGAGGAGGATCCCCGGAACGGGCCGCTGGAGGAAGACGGCGAG 2034
Query 1828 CGCTACGATGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGAGCGTC 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2035 CGCTACGATGAGGACGAGGAGGCCGCCAAGGACCGGCGCAACATCCGTGCACCAGAGTGGCCGCGCCGAGCGTC 2108
Query 1902 CTGCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGCCACCTCCAGCTCACTCAGCACCCCGA 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2109 CTGCACCTCCTCCACCAGCGGCAGCAAGCGCAACTCTGTGGACACGGCCACCTCCAGCTCACTCAGCACCCCGA 2182
Query 1976 GCGAGCCCCTCAGCCCCACCAGCTCCCTGGGCGAGGAGCGTAAC------------------------------ 2019
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2183 GCGAGCCCCTCAGCCCCACCAGCTCCCTGGGCGAGGAGCGTAACTAAGTCCGCCCCACCACACTCCCCGCCTGT 2256
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2257 CCTGCCTCTCTGCTCCAGAGAGAGGATGCAGAGGGGTGCTGCTCCTAAACCCCCGCTCCAGATCTGCACTGGGT 2330
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2331 GTGGCCCCGCAGTGCCCCCACCCAGTCCGCCAAACACTCCACCCCCTCCAGCTCCAGTTTCCAAGTTCCTGCAC 2404
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2405 TCCAGAATCCACAAAGCCGTGCCTTTCTCTGGCTCCAGAATATGCATAATCAGCGCCCTGGAGTCCCCTGGGCC 2478
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2479 TGGACCGCTTCCCAGAGGCCAGGAATCTGCCATTACTCTGCGGTGGTGCCAGAGGTTTTAGGAAACCTGGCATG 2552
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2553 GTGCTTTCAGGTCTGGGGCTTTTAGAGCCCCCCGTGTGGCTTACAAATTCTACAGCATACAGAGCAGGCCACGC 2626
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2627 TCAGGCCCGGCATGCGGGCCACCAAGTTCTGGAAACCACGTGGTGTCCCTGCGAATGGGGCGATCAAGTCCAGA 2700
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2701 GCCGGGGCACTTTCAGAGTTTGAAGGTAACTGAGAGCAGATGGTCCTCCATTTCAACTCCAGAAGTGGGGCTCT 2774
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2775 GGGAGGGATGTTCTAGCCCTCCCTGGCATGTCAGAGCCAGGCTCTGCCTGGAGGATCCCTCCATCCGGCTCCTG 2848
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2849 TCATCCCCTACACTTTGGCCAAGCAAGAGGTGGTAGAACCACTTGGCTGCTCATTCCTTCTGGAGGACACACAG 2922
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2923 TCTCAGTCCAGATGCCTTCCTGTCTTTCTGGCCCTTTCTGGACCAGATCCTACTCTTCCTTTCTAAATCTGAGA 2996
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 2997 TCTCCCTCCAGGGAATCCGCCTGCAGAGGACAGAGCTGGCTGTCTTCCCCCACCCCTAACCTGGCTTATTCCCA 3070
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 3071 ACTGCTCTGCCCACTGTGAAACCACTAGGTTCTAGGTCCTGGCTTCTAGATCTGGAACCTTACCACGTTACTGC 3144
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 3145 ATACTGATCCCTTTCCCATGATCCAGAACTGAGGTCACTGGGTTCTAGAACCCCCACATTTACCTCGAGGCTCT 3218
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 3219 TCCATCCCCAAACTGTGCCCTGCCTTCAGCTTTGGTGAAAGGGAGGGCCCCTCATGTGTGCTGTGCTGTGTCTG 3292
Query 2020 -------------------------------------------------------------------------- 2019
Sbjct 3293 CACCGCTTGGTTTGCAGTTGAGAGGGGAGGGCAGGAGGGGTGTGATTGGAGTGTGTCCGGAGATGAGATGAAAA 3366
Query 2020 --------------------- 2019
Sbjct 3367 AAATACATCTATATTTAAGAA 3387
