Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15486
- Subject:
- XM_017001245.2
- Aligned Length:
- 1927
- Identities:
- 1181
- Gaps:
- 725
Alignment
Query 1 ATGGCGGCCGGAGTTGCGGCCTGGCTGCCTTTTGCCCGGGCTGCGGCCATCGGGTGGATGCCGGTGGCCAACTG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGCCGGAGTTGCGGCCTGGCTGCCTTTTGCCCGGGCTGCGGCCATCGGGTGGATGCCGGTGGCCAACTG 74
Query 75 CCCCATGCCCCTGGCCCCGGCCGACAAGAACAAGCGGCAGGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCCCATGCCCCTGGCCCCGGCCGACAAGAACAAGCGGCAGGATGAGCTGATTGTCCTCAACGTGAGTGGGCGGA 148
Query 149 GGTTCCAGACCTGGAGGACCACGCTGGAGCGCTACCCGGACACCCTGCTGGGCAGCACGGAGAAGGAGTTCTTC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGTTCCAGACCTGGAGGACCACGCTGGAGCGCTACCCGGACACCCTGCTGGGCAGCACGGAGAAGGAGTTCTTC 222
Query 223 TTCAACGAGGACACCAAGGAGTACTTCTTCGACCGGGACCCCGAGGTGTTCCGCTGCGTGCTCAACTTCTACCG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCAACGAGGACACCAAGGAGTACTTCTTCGACCGGGACCCCGAGGTGTTCCGCTGCGTGCTCAACTTCTACCG 296
Query 297 CACGGGGAAGCTGCACTACCCGCGCTACGAGTGCATCTCTGCCTACGACGACGAGCTGGCCTTCTACGGCATCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CACGGGGAAGCTGCACTACCCGCGCTACGAGTGCATCTCTGCCTACGACGACGAGCTGGCCTTCTACGGCATCC 370
Query 371 TCCCGGAGATCATCGGGGACTGCTGCTACGAGGAGTACAAGGACCGCAAGAGGGAGAACGCCGAGCGGCTCATG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCCGGAGATCATCGGGGACTGCTGCTACGAGGAGTACAAGGACCGCAAGAGGGAGAACGCCGAGCGGCTCATG 444
Query 445 GACGACAACGACTCGGAGAACAACCAGGAGTCCATGCCCTCGCTCAGCTTCCGCCAGACCATGTGGCGGGCCTT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACGACAACGACTCGGAGAACAACCAGGAGTCCATGCCCTCGCTCAGCTTCCGCCAGACCATGTGGCGGGCCTT 518
Query 519 CGAGAACCCCCACACCAGCACGCTGGCCCTGGTCTTCTACTACGTGACTGGCTTCTTCATCGCTGTCTCGGTCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGAGAACCCCCACACCAGCACGCTGGCCCTGGTCTTCTACTACGTGACTGGCTTCTTCATCGCTGTCTCGGTCA 592
Query 593 TCACCAACGTGGTGGAGACGGTGCCGTGCGGCACGGTCCCGGGCAGCAAGGAGCTGCCGTGCGGGGAGCGCTAC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCACCAACGTGGTGGAGACGGTGCCGTGCGGCACGGTCCCGGGCAGCAAGGAGCTGCCGTGCGGGGAGCGCTAC 666
Query 667 TCGGTGGCCTTCTTCTGCCTGGACACGGCGTGCGTCATGATCTTCACCGTGGAGTACCTCCTGCGGCTCTTCGC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCGGTGGCCTTCTTCTGCCTGGACACGGCGTGCGTCATGATCTTCACCGTGGAGTACCTCCTGCGGCTCTTCGC 740
Query 741 GGCTCCCAGCCGCTACCGCTTCATCCGCAGCGTCATGAGCATCATCGACGTGGTGGCCATCATGCCCTACTACA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGCTCCCAGCCGCTACCGCTTCATCCGCAGCGTCATGAGCATCATCGACGTGGTGGCCATCATGCCCTACTACA 814
Query 815 TCGGTCTGGTCATGACCAACAACGAGGACGTGTCCGGCGCCTTCGTCACGCTCCGGGTCTTCCGCGTCTTCAGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TCGGTCTGGTCATGACCAACAACGAGGACGTGTCCGGCGCCTTCGTCACGCTCCGGGTCTTCCGCGTCTTCAGG 888
Query 889 ATCTTCAAGTTTTCCCGCCACTCCCAGGGCCTGCGGATCCTGGGCTACACACTGAAGAGCTGTGCCTCCGAACT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCTTCAAGTTTTCCCGCCACTCCCAGGGCCTGCGGATCCTGGGCTACACACTGAAGAGCTGTGCCTCCGAACT 962
Query 963 GGGCTTTCTTCTCTTCTCCCTCACCATGGCCATCATCATCTTTGCCACTGTGATGTTTTATGCCGAGAAGGGCT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGCTTTCTTCTCTTCTCCCTCACCATGGCCATCATCATCTTTGCCACTGTGATGTTTTATGCCGAGAAGGGCT 1036
Query 1037 CCTCGGCCAGCAAGTTCACAAGCATCCCTGCCTCGTTTTGGTACACCATTGTCACCATGACCACACTGG----- 1105
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCTCGGCCAGCAAGTTCACAAGCATCCCTGCCTCGTTTTGGTACACCATTGTCACCATGACCACACTGGGTTCT 1110
Query 1106 --GATACGGAGACATGGTTCCTAAGACGA--TTGCAGGGAAGATCTTCGGCTCCATCT-------GCTCCTTGA 1168
|.|.|.||.| |||.||||| || .|||| ||| ||.||||| |...|||
Sbjct 1111 CTGGTGCTGAAA-----TTCTTAAGA-GAGGGTGCA--GAA---------CTGCATCTCAACAAGGAATCTT-- 1165
Query 1169 GTGGCGTCCTGGTCATTGCCCTGCCAGTCCCT--GTGATTGTTTCCAACTTTAGCCGGATTTAC-CACCAGAAT 1239
||||| |.|.|.| |.|| .|||.||.|||| ||| |.||||
Sbjct 1166 ------------TCATT--CGTTCAA--CACTTATTGAGTGCTTCC---------------TACACTCCAG--- 1205
Query 1240 CAGAGAGCTGATAAACGCAGGGCACAAAAGAAGGCCCGCCTTGCCAGGATCCGTGTGGCCAAAACAGGCAGTTC 1313
|| .|||.|||| ||||.
Sbjct 1206 ------GC-------AGCATGGCA-------------GCCTC-------------------------------- 1221
Query 1314 GAATGCATACCTGCACAGCAAGCGCAACGGGCTCCTCAACGAGGCGCTGGAGCTGACGGGCACCCCAGAAGAGG 1387
Sbjct 1222 -------------------------------------------------------------------------- 1221
Query 1388 AGCACATGGGCAAGACCACCTCACTCATCGAGAGCCAGCATCATCACCTGCTGCACTGCCTGGAAAAAACCACT 1461
Sbjct 1222 -------------------------------------------------------------------------- 1221
Query 1462 AACCACGAGTTTATTGATGAGCAGATGTTTGAGCAGAACTGCATGGAGAGTTCAATGCAGAACTACCCATCCAC 1535
Sbjct 1222 -------------------------------------------------------------------------- 1221
Query 1536 AAGAAGTCCCTCACTGTCCAGCCACCCAGGCCTCACTACCACCTGCTGCTCCCGTCGTAGTAAGAAGACCACAC 1609
Sbjct 1222 -------------------------------------------------------------------------- 1221
Query 1610 ACCTGCCCAATTCTAACCTGCCAGCTACTCGCCTGCGCAGCATGCAAGAGCTCAGCACGATCCACATCCAGGGC 1683
Sbjct 1222 -------------------------------------------------------------------------- 1221
Query 1684 AGTGAGCAGCCCTCCCTCACAACCAGTCGCTCCAGCCTTAATTTGAAAGCAGACGACGGACTGAGACCAAACTG 1757
Sbjct 1222 -------------------------------------------------------------------------- 1221
Query 1758 CAAAACATCCCAGATCACCACAGCCATCATCAGCATCCCCACTCCCCCAGCGCTAACCCCAGAGGGGGAAAGTC 1831
Sbjct 1222 -------------------------------------------------------------------------- 1221
Query 1832 GGCCACCCCCTGCCAGCCCAGGCCCCAACACGAACATTCCTTCCATAGCCAGCAATGTTGTCAAGGTCTCCGCC 1905
Sbjct 1222 -------------------------------------------------------------------------- 1221
Query 1906 TTG 1908
Sbjct 1222 --- 1221
