Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_004859.1
- Aligned Length:
- 4514
- Identities:
- 161
- Gaps:
- 4333
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGGTGCTCAGTGGCTAGCCGAATAGCCGTGTTTGGGACCTGGGCTCGGGCTTCTTGCGTCCCCGCTAAGAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGTCACGGGGCCGAATCGTCCGTATTCTCTCAGCTTCAAGCTCCTCTACTTTTCAACCAGGTCACTAGCCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTCCTCTTATCAAACTTCCGGAACTGCCACCCCACCAGTGACTCCACAGGCACCAGGGCATGCAACAGGGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACAGGAAGGCTCTCTTCTTCACCTCAAGCCTGCTGGGCTAACACTTGCGATTTTTACTAGAGTTAACTTTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAATGTATGTCTCTGACTCTAGAATTTCAAGAGAAGTTCCACTTAGTGACTCCTAAGTGGAAGTTCTAAGATGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTTCCCAGTGAGGTGATGAAGAGGTTTGAGCTTTAGAGTGCGGTTGCAAAGCTCTTCTCTGACCTGAACAATGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGTAGCTGTGGACCAACAAATCCAGACTCCTTCAGTACAAGATCTCCAAATAGTTAAACTGGAAGAAGATTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACTGGGAGCAGGAAATTTCCCTTCAAGGGAATTACCCTGGACCAGAGACATCCTGCCAGAGCTTTTGGCATTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGTTACCAAGAAGCATCACGACCCCGAGAGGCCCTCCTCCAGCTCCAGAAGCTCTGTTGTCAGTGGCTAAGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGAGAAGTGTACAAAAGAGCAGATCCTGGAGTTGCTGGTCCTAGAACAGTTCCCGACTGTCCTTCTCCAGGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATCCAGATCTGGGTCAGACAGCAGCATCCGGAGAGTGGAGAGGAGGCAGTGGCCCTGGTGGAAGACTTGCAGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAACCTGGAAGACAGAGGCTGGAGCCTCGGGCGAGGCCGTCCGGCCGCACCCCTCCTGCTCAGCTGCGGTCGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATGGCCAATGACAGCTGCGGGCCCGGCGAGCCGAGCTCGAGCGAGCGAGACCGGCAGTACTGCGAGCTGTGCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAAGATGGAGAACCTGCTGCGCTGCAGCCGCAGCTCCTTCTGCTGCAAGGAGCGCCAGCGCCAGGACTGGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGCACAAGCTCGTGTGCCAGGGCAGCGAGGGCGCCCTCGGCCACGGAGGGGGCCCTCACCAGGACTCCGGCCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGCGCCGCCCGCTGCAGCGCCGCCGTCCAGGGACCGGGCCCTGGAGGCCAGGAAGGCAGCGAGGCGCCGGGACA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCGCCTCCGGGGACGCAGCCAAGGCAAAGGCCAAGTCCGCGGCCGACCCCGCGGCGGCCGCGTCCCCGCCTCGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCGTCCCCGGGCCGGACAAAAGCCATGGCTGCTTGTTATCCGGTCAATGGAACGGGTTATGTACGTCATGTTGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TAATCCAAATGGAGACGGAAGACGTGTGAAATGTATTACATTACGTTAAAGAACGGGATGCCAAGCCCTGCCTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATGTGGCTCTGGGAATTCCTGCAGAGAAGAGCAGGGGTGGCCAGGAGATAGTGAGCAGCTCCCAGGAGGCATGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGGATCCAGAACCTGGACTGAAGAACCACCTAGAAATAACTCAGCAGAATTCTGAAAATGAGGTCACGCTGGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTTCCAATCCATAGGCCCAAAGTGAACTCCCACGTGGAGTAGGATGAAAACCCACAGCATCTAGATCTTCAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTCTGGAGAAAAAGAGAGTGTGAAAGACTGCTCAGTGGCTGGGGTGAGAGTCAAGTCTGGCCAGGTGCTAATCT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCCTGGAGGATGAGAAGGTGGCAGGAGTGCACTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGATACAAAGAAACCAAGATTTTTCTGGGAATTCTCAGAGGCCTGGATCCACGAAAAACTCCGCACCTGCCATC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAAACCACCAGGTGTACCGGATTATGGCTGAGCAGCTGTGAGAACATGGCTTCCTGTGGACCCTGGAGCAATGT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGCTATCGGTTCAAAAACCTCCTGACCGACTACTGCAAAGCCAGGAGCACCTACACACCAGGCACCAGTGTCTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTATGATGAGATGGATGCCCTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTAGAGGTGGTAGGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCCTTCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTGGCGGGATGGTAATGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AATAGTGGAGGAGTCTCAAGAGGAATCCTGGAGGCTTGGTCCCCAGGCCTTGAGGTGGAATCCCAGTGGCAACT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTCCCCCACAATGGACCTCAGAGCAGTGGGAGCGACGCAGTCCTGTGGGAAGCATTCAGGCTCAGAATCAGGAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATGTGATTATTGTCCTGGCTCTGTTATGACTAATTTGGGTCTGGAATGGCCTCATCGGGGGAAAAATTGGTGAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCAACCCTCTACTGAACCAGTAGTCCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGGTGGCTCACAAAGACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCTTCCTGCCTTCAGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AACAACATTACAGGAAGAGAGGAGAGAAAGGTAGGAGTTAAAGATCCAGTCATTTGTTTCCATCTAAAGTGCCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TATAAGCCGGGCATGGTGGCGCAAGCCTGTAGTCCCAGCTACTCGGGAGGCTGGGGCAGGAGAATCACTTGAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CCAGGAGTTGGAGGCCGCAGTGAGCTGTGATCATGCCACTGCATTCCAGCCTGGGCGACAGAGTGAGACCCAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTCAGCTGAAAAATAATAATATTATTAAAAGAATTTAAAATAAAGTGTTCCATAGATGTGAACCCTGCGTAGAT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TATACACACCAGTCTGCCATTTAAAAGGTTTGTTGTTCTTGGGCAACCTCTTTAAATACCCTTAGCCTCCATTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCTCATCTGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCTGACACAGTATTAG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CACTTGGCAAACGTTAGTTTTCATTATCATCATCATTATAATTATTATGAAAATAGATAAGGGCATTATCCTGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACCCTCAAAGGAGTAAAAGGGGGAAAATGAGTCATTAAACTTTCTCTTCTGGGAACTAGACCTTCTTGAGAGGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACTATCATTCTCATTTCACCTGTCACTTCCAGACATGGGAGCAGAAAGTGAATTTCAGAACTCCATGTCCCCTC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTGCTTTTCTCTGAGCAGGACTTCCAGTTCCCCAGCCAGATGGGGTCACAATGCTGCAGAAAAGTGAAGAGCTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGGAATGAAGATCTCCCGGACTTCAAGGAGATTCAGAAAACGTCCAGTGCAGGTGGGAAATGAATGGGAGCTAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CATTCCACCAACAAAGTCAGCCCTGGGATTCTAAACTCGGACAAGCCAGCACTGGTTAAGGGCTGAGGGGAACC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGGCACTCAGTGCACCCAGTTTACTATTCTGTGGTGTGGAAAGCACAGGACTTGAGAAGCAGGTGGCACCCAGG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AAAGCCTGTTCCCCTAAGTAAGTTTGAACTTTAGTTACTTGAAAAAAGGTATAACTGAATTATGAGTGTTTATG 3552
Query 1 ----------------------------------------------------------ATGCAGTGGCGCCATC 16
||||||||||.|.|||
Sbjct 3553 ATTTTATCTTTATTTTATTTTTTTTGAGATGGAGTCTCACCCTGTCACCCAGGCTGGAATGCAGTGGCACAATC 3626
Query 17 TCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCTGGGATTAC 90
||.|.||||||||.||||.|.|||.|||||||||||.||||||.||||||..||||||||||||..||||||||
Sbjct 3627 TCGGTTCACTGCAGCCTCTACCTCTCAGGTTCAAGCAATTCTCCTGCCTCACCCTCCTGAGTAGTGGGGATTAC 3700
Query 91 AGGCGTGTGCCACTACACTCA--------ACTAATTTTTGTATTTTTAGGAGAGACGGGGTTTCACCCTGTTGG 156
|| |||||||||.|| || .|||||||||.|||||||||.|||||||||||||||||.||||||
Sbjct 3701 AG--GTGTGCCACCAC---CATGCCCGTCTCTAATTTTTATATTTTTAGTAGAGACGGGGTTTCACCATGTTGG 3769
Query 157 CCAGGCTGGTCTCGAACTCCTGACCTCAAG-------------------------------------------- 186
||||||||||||.|||||||||||||||||
Sbjct 3770 CCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCCACCTTGGCCCCCCACAAAGTGCTGGGATTACAGG 3843
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3844 CGTGAGCCACTGTGCCTGGTCTATCTTTAAATTCCTATCTGAATTTGTTTAGGTTTTTTAAATAAAAATCTTTC 3917
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3918 TTTTTTTTTAGAGACAGGGGTTCACCATGGTGCCCAGGCTGATCTCGAACTCCTCCTGGACTCAAGCTATCCTC 3991
Query 187 -------------------------------------------------------------------------- 186
Sbjct 3992 CCACCTCAGCCTCCCAAAGTACTGGGATTACAGACATGAGCCACATGCTTGACCTGAATTTTAACTGCAGTTAA 4065
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4066 TTATCACTTAACCAGCGAATTCACACAGGAGAAATCCCCTGGCCGGGCGCGGTGGCTCACACCTGTAATCCCAG 4139
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4140 CTCTTCGGGAGGCCGAGGTGGGTAGATCACAAGGTCAAGAGATCAAGACCATTCTGGCCAACATGGTGAAACTC 4213
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4214 CGTCTGTACCAAAAATACAAAAATTACCTGGGCATGGTGGTACGTGCCTGTAATCCCAGCTACTTGGCAGGCTG 4287
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4288 AGGCAGGAGCATTGCTTGAACCCATGAGGTGGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCAAGCCTG 4361
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4362 GGTGACAGAGCAAGACTCCATCTCTACTACAAAAAAAAAAAAAAAAAAAATTCAACCACCTTAGGAAGCCTCTC 4435
Query 187 -------------------------------------------------------------------------- 186
Sbjct 4436 ATTTATGTATTTCTAGCATGTAATTAGTGTTGCACATGGGAAGGGCTAATAGATGCTGACAGAGTGAACAACTT 4509
