Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_15487
- Subject:
- NR_023360.3
- Aligned Length:
- 2355
- Identities:
- 163
- Gaps:
- 2170
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCACGGAGCTCGTAGTTTCCCGGACGGGCCGCTCCCGGCCTCGCGGCCTCGCCTCCCCACACTACAACTCCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGGCAGCGGGCGCGGCTCCCCGTACCCACCAGCTGGCCGGGCAGGGCAGCCACTTCGCGGTCGGGCCCGCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTGCGGGCACCCGCGCGACGGGCGGGAAGATGGCGGACGTGGTCGTGGGTAAAGACAAGGGCGGGGAGCAGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTCATCTCGCTGCCTCTATCCCGCATCCGGGTCATCATGAAGAGCTCCCCCGAGGTGTCCAGCATCAACCAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGCGTTGGTGCTCACGGCCAAGGCCACGATATATTACCAAAGAAGATTTTAGCTAGTAAATACCTGAAAATGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTAAAGAGGAAAAGAGGGAAGAAGATGAGGAGAATGACAATGATAATGAAAGTGACCATGATGAAGCTGACTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TAAACCAAAAGTGCTTTAAAAACCAGCCTGGCGAGGACAGCCCTGGACCCACTCCACTGTCTCTAAGTAAACAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCACTGCCCGCTTTTAGCGTCTTCACTTCTTCACAGAGTTCCAGTGTGTGGTATTCTTTCGAGGTATTCTTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGGCCGAGATTGAGCACCTCATGTACCTACGCCACAGACAGCCAGAGGGAAAGCGACCCAGACAGCAGCCCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCGACAGGCCCACCCTGCAGCTCAGGCACCAAGAAAACAGCCGATACTGGCAGCCATTGCAGCTCCAAACTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGAGGCAAGGCCAATTTTAACTTTTCAATTTACAGTCGATTTTGAAGAGCTTCTACATATCGGTTATGTAAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCATATATGTATATTTTGGAATCAGTTCTTATAAACAGCTCGATTCAGTTTTAGCTAAATTTATAGTTTAGGTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTATGTTACATTTGAATTTTTGTCTTAAGAAAAGTTGACTGTTCAGATATTTTTCTACTGTAAAGAAATATACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTCTATTAAAGATCTGTACATATTTTTACAGTAAAATGCTTTATGGAACTAGTTTTAGAGCCCTCTATGGCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAAGGCCTTGCTTACTGCCTGCAAATTTTGAGAAATTTAAAAATAAGCATTCTAACACTTTTATTCCCACAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAATTCCAAGTCAAATTATCAAATCAAATACAAAAATAAGTCTTACCTCTTGTATAAGCATGTTGTACTAAAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAATTTTGAAACATTTTGTATATTGGAGATCTCTCTCATCTTACTGTTCTTTGCTTTAAATTCCTGGCACTTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTTTTACTGTCTATAAGAGAAAACCTATCATAAGCCCAATTTTTTTTTTCCACTTAGGGTAAATGTTTGGCTCC 1332
Query 1 ------------------------------------------------------------------ATGCAGTG 8
.|||.|||
Sbjct 1333 TCTCATTTCATTATCTTTTTTTTTTTTTTTTTAAAGACAGATTCTCACTCAGTTGCCCAGGCTGGATTGCGGTG 1406
Query 9 GCGCCATCTCAGCTCACTGCAACCTCCATCTCCCAGGTTCAAGCGATTCTCGTGCCTCGGCCTCCTGAGTAGCT 82
||||..|||||||||||||||||||||..||||||||||||||.|||||||.||||||..||||||||||||||
Sbjct 1407 GCGCTGTCTCAGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCATCCTCCTGAGTAGCT 1480
Query 83 GGGATTACAGGCGTGTGCCACTACACTCAACTAATTTTTGTA-TTTTTAGGAGAGACGGGGTTTCACCCTGTTG 155
|||||||||||||||||||||.|..|.||||..||||||||| |||||||.|||||||||| ||||||.|||||
Sbjct 1481 GGGATTACAGGCGTGTGCCACCATGCCCAACCTATTTTTGTATTTTTTAGTAGAGACGGGG-TTCACCATGTTG 1553
Query 156 GCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------------------- 186
||||||||.|||||.|||||||.|||||||.
Sbjct 1554 GCCAGGCTTGTCTCAAACTCCTAACCTCAACTGATCCACCTGCCTCAGCCTCCCAAAGTGCCGCCGGGATTACA 1627
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1628 GGCGTGAGCCACCATGCCTGGCCTTCATTATCTCTTTTTTAAAAATGAAAAAGTTTATAATTTACATTCAGTAA 1701
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1702 AATCACCCTTTTTAGTGTCTAGTCTGTGAATTTTGACAAATGCATGGTTTTGTAACCAATCGATAGGACAGTTC 1775
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1776 TGCCACCCAGGACATTCCCCTCTGTTCCTCTGTTCCTCTCTTCTCCTGCCCCCTAGCAACCACTGGTGTTTTCT 1849
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1850 GTCCCTCTTGTTCATTGACATTTATTTTAAAATAAAATATTTTAAAATCTACTTTTTGGTGTACAGTTCTGAGT 1923
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1924 TTTGGCAAATGCAGTCAAGTCACTACCACCACCACAATTAACAGCTATATCACCCTCCAGTAAATTCCCTGTGG 1997
Query 187 -------------------------------------------------------------------------- 186
Sbjct 1998 TCAGCTCCTTCCCCACCTTTTACCGTGGCAACCGTCAAGCTATTCTCTGTCCCTATACCAGGTGTCATCAAATT 2071
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2072 TTTTTCTGGAAAGGGCCATGCAGTAAATAGTTCAAGCTTTGTGGGCTTTTATAGTCTCTGTTGCTGCTGCTGAA 2145
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2146 CTCAGCTGTTGTAGCACGAAAGCAGCCAGGTAATTACTAGATGAAGGAATGCAGGTGGCTGTGTTTCAATAGAG 2219
Query 187 -------------------------------------------------------------------------- 186
Sbjct 2220 CTTTATTTCTGCAAACTGAAACTTGAGTTTTGTGTAATTTTCATGTGTCATGAAATACTGTTTTCTCCAACCAT 2293
Query 187 ------------------------------------------------------------- 186
Sbjct 2294 TTAATAATGTAAATACTTGCTAGCTTATGTGCCATTAAAAAATGACTTGATTTGGCTTACA 2354